RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 LDHAL6AQ6ZMR3 332 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 UBE2Q1Q7Z7E8 422 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 ERO1BQ86YB8 467 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 HTATIP2Q9BUP3 242 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 PUS3Q9BZE2 481 aaKnown RBP4.48□□□□□ -1.69
PTPRC-213ENST00000529828 PRO3102Q9H379 93 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 STAP2Q9UGK3 403 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 TAOK2Q9UL54 1235 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 FAM205AQ6ZU69 1335 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 DNAH12Q6ZR08 3092 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 ARAP2Q8WZ64 1704 aa4.48□□□□□ -1.69
PTPRC-213ENST00000529828 FRAT2O75474 233 aaPredicted RBP4.47□□□□□ -1.69
PTPRC-213ENST00000529828 GJB1P08034 283 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 CYP2C8P10632 490 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 ELNP15502 786 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 GJA8P48165 433 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 LSM11P83369 360 aaKnown RBP eCLIP4.47□□□□□ -1.69
PTPRC-213ENST00000529828 PPIL2Q13356 520 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 CCDC57Q2TAC2 916 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 Q7L0L9 218 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 LINS1Q8NG48 757 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 TDRD7Q8NHU6 1098 aaKnown RBP4.47□□□□□ -1.69
PTPRC-213ENST00000529828 U2AF1L4Q8WU68 220 aaKnown RBP4.47□□□□□ -1.69
PTPRC-213ENST00000529828 FAM84BQ96KN1 310 aaPredicted RBP4.47□□□□□ -1.69
PTPRC-213ENST00000529828 GABRQQ9UN88 632 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 ADGRA2Q96PE1 1338 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 EVI5O60447 810 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 UBXN2AP68543 259 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 VPS37DQ86XT2 251 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 DIS3LQ8TF46 1054 aaKnown RBP4.47□□□□□ -1.69
PTPRC-213ENST00000529828 TMOD2Q9NZR1 351 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 ZMYND8Q9ULU4 1186 aaPredicted RBP4.47□□□□□ -1.69
PTPRC-213ENST00000529828 SALL2Q9Y467 1007 aaPredicted RBP4.47□□□□□ -1.69
PTPRC-213ENST00000529828 NR2E3Q9Y5X4 410 aa4.47□□□□□ -1.69
PTPRC-213ENST00000529828 GNRH1P01148 92 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 TFRCP02786 760 aaKnown RBP4.46□□□□□ -1.69
PTPRC-213ENST00000529828 INHAP05111 366 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 SLURP2P0DP57 97 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 PRMT2P55345 433 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 TCP10Q12799 353 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 MOGSQ13724 837 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 BEND3Q5T5X7 828 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 ANKRD23Q86SG2 305 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 C7orf61Q8IZ16 206 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 NKX2-3Q8TAU0 364 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 TEKT1Q969V4 418 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 DEFB118Q96PH6 123 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 ZNF341Q9BYN7 854 aa4.46□□□□□ -1.69
PTPRC-213ENST00000529828 GRM8O00222 908 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 ADCY3O60266 1144 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 SYN1P17600 705 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 HOXD10P28358 340 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 BCAMP50895 628 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 FCGRTP55899 365 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 PPATQ06203 517 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 NFIAQ12857 509 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 UBE4AQ14139 1066 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 LRRC24Q50LG9 513 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 APOBEC3HQ6NTF7 200 aaKnown RBP4.46□□□□□ -1.7
PTPRC-213ENST00000529828 GPR153Q6NV75 609 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 SLC4A10Q6U841 1118 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 DEFB123Q8N688 67 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 SUCLG2Q96I99 432 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 PAWRQ96IZ0 340 aaKnown RBP4.46□□□□□ -1.7
PTPRC-213ENST00000529828 PARK7Q99497 189 aaKnown RBP4.46□□□□□ -1.7
PTPRC-213ENST00000529828 CHMP4AQ9BY43 222 aa4.46□□□□□ -1.7
PTPRC-213ENST00000529828 ZCCHC17Q9NP64 241 aaKnown RBP4.46□□□□□ -1.7
PTPRC-213ENST00000529828 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.46□□□□□ -1.7
PTPRC-213ENST00000529828 FANCIQ9NVI1 1328 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 ZNF316A6NFI3 1004 aaPredicted RBP4.45□□□□□ -1.7
PTPRC-213ENST00000529828 SGPL1O95470 568 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 BCRP11274 1271 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 FLT3LGP49771 235 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 DIXDC1Q155Q3 683 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 METTL24Q5JXM2 366 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 DCAF15Q66K64 600 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 GPAT2Q6NUI2 795 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 GADL1Q6ZQY3 521 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 CCDC84Q86UT8 332 aaPredicted RBP4.45□□□□□ -1.7
PTPRC-213ENST00000529828 KLHDC4Q8TBB5 520 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 ZDHHC15Q96MV8 337 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 C9orf78Q9NZ63 289 aaPredicted RBP4.45□□□□□ -1.7
PTPRC-213ENST00000529828 KCNH4Q9UQ05 1017 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 TNPO2O14787 897 aaKnown RBP4.45□□□□□ -1.7
PTPRC-213ENST00000529828 EXOSC9Q06265 439 aaKnown RBP4.45□□□□□ -1.7
PTPRC-213ENST00000529828 CCDC184Q52MB2 194 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 FBXO33Q7Z6M2 555 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 FAM83AQ86UY5 434 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 WWC1Q8IX03 1113 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 ZFPM1Q8IX07 1006 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 TBC1D22AQ8WUA7 517 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 KAZALD1Q96I82 304 aa4.45□□□□□ -1.7
PTPRC-213ENST00000529828 PRKRIP1Q9H875 184 aaPredicted RBP4.45□□□□□ -1.7
PTPRC-213ENST00000529828 TRIM32Q13049 653 aa4.44□□□□□ -1.7
PTPRC-213ENST00000529828 CAVIN4Q5BKX8 364 aa4.44□□□□□ -1.7
PTPRC-213ENST00000529828 CDC42EP5Q6NZY7 148 aa4.44□□□□□ -1.7
PTPRC-213ENST00000529828 SMCR8Q8TEV9 937 aaPredicted RBP4.44□□□□□ -1.7
PTPRC-213ENST00000529828 FAM151AQ8WW52 585 aa4.44□□□□□ -1.7
PTPRC-213ENST00000529828 BICC1Q9H694 974 aaKnown RBP4.44□□□□□ -1.7
PTPRC-213ENST00000529828 DAGLAQ9Y4D2 1042 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms