RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 VEZTQ9HBM0 779 aa16.31■□□□□ 0.2
SMCO4-205ENST00000529714 ANO2Q9NQ90 1003 aa16.31■□□□□ 0.2
SMCO4-205ENST00000529714 FAM198AQ9UFP1 575 aa16.31■□□□□ 0.2
SMCO4-205ENST00000529714 PPP2R3BQ9Y5P8 575 aa16.31■□□□□ 0.2
SMCO4-205ENST00000529714 MYH1P12882 1939 aa16.31■□□□□ 0.2
SMCO4-205ENST00000529714 CNTNAP1P78357 1384 aa16.3■□□□□ 0.2
SMCO4-205ENST00000529714 ATRNL1Q5VV63 1379 aa16.3■□□□□ 0.2
SMCO4-205ENST00000529714 ASTN2O75129 1339 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-205ENST00000529714 APPP05067 770 aa16.3■□□□□ 0.2
SMCO4-205ENST00000529714 CACNB3P54284 484 aa16.3■□□□□ 0.2
SMCO4-205ENST00000529714 EAPPQ56P03 285 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-205ENST00000529714 LDHDQ86WU2 507 aa16.3■□□□□ 0.2
SMCO4-205ENST00000529714 MAPKAPK5Q8IW41 473 aa16.3■□□□□ 0.2
SMCO4-205ENST00000529714 IFNL3Q8IZI9 196 aa16.3■□□□□ 0.2
SMCO4-205ENST00000529714 FAM151AQ8WW52 585 aa16.3■□□□□ 0.2
SMCO4-205ENST00000529714 MAP4K1Q92918 833 aa16.3■□□□□ 0.2
SMCO4-205ENST00000529714 DCPSQ96C86 337 aaKnown RBP16.3■□□□□ 0.2
SMCO4-205ENST00000529714 OSBPL5Q9H0X9 879 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-205ENST00000529714 GPBP1L1Q9HC44 474 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-205ENST00000529714 EPB41L4AQ9HCS5 686 aaPredicted RBP16.3■□□□□ 0.2
SMCO4-205ENST00000529714 DDX4Q9NQI0 724 aaKnown RBP16.3■□□□□ 0.2
SMCO4-205ENST00000529714 BAZ2AQ9UIF9 1905 aaKnown RBP16.29■□□□□ 0.2
SMCO4-205ENST00000529714 LAMA4Q16363 1823 aa16.29■□□□□ 0.2
SMCO4-205ENST00000529714 LAMB1P07942 1786 aa16.29■□□□□ 0.2
SMCO4-205ENST00000529714 TCP10L2B9ZVM9 353 aa16.29■□□□□ 0.2
SMCO4-205ENST00000529714 YY1P25490 414 aa16.29■□□□□ 0.2
SMCO4-205ENST00000529714 PTH1RQ03431 593 aa16.29■□□□□ 0.2
SMCO4-205ENST00000529714 PICALMQ13492 652 aa16.29■□□□□ 0.2
SMCO4-205ENST00000529714 SBK1Q52WX2 424 aa16.29■□□□□ 0.2
SMCO4-205ENST00000529714 NAPBQ9H115 298 aa16.29■□□□□ 0.2
SMCO4-205ENST00000529714 DHX36Q9H2U1 1008 aaKnown RBP16.29■□□□□ 0.2
SMCO4-205ENST00000529714 ARPP21Q9UBL0 812 aaPredicted RBP16.29■□□□□ 0.2
SMCO4-205ENST00000529714 CTNNA3Q9UI47 895 aa16.29■□□□□ 0.2
SMCO4-205ENST00000529714 TAOK2Q9UL54 1235 aa16.29■□□□□ 0.2
SMCO4-205ENST00000529714 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
SMCO4-205ENST00000529714 FGAP02671 866 aa16.28■□□□□ 0.2
SMCO4-205ENST00000529714 TDO2P48775 406 aa16.28■□□□□ 0.2
SMCO4-205ENST00000529714 RASA3Q14644 834 aa16.28■□□□□ 0.2
SMCO4-205ENST00000529714 SULF1Q8IWU6 871 aa16.28■□□□□ 0.2
SMCO4-205ENST00000529714 AMOTL1Q8IY63 956 aa16.28■□□□□ 0.2
SMCO4-205ENST00000529714 BACH2Q9BYV9 841 aa16.28■□□□□ 0.2
SMCO4-205ENST00000529714 MCM9Q9NXL9 1143 aa16.28■□□□□ 0.2
SMCO4-205ENST00000529714 POLR2AP24928 1970 aaKnown RBP16.27■□□□□ 0.2
SMCO4-205ENST00000529714 TCP10Q12799 353 aa16.27■□□□□ 0.2
SMCO4-205ENST00000529714 DEFB129Q9H1M3 183 aa16.27■□□□□ 0.2
SMCO4-205ENST00000529714 USP17L12C9JPN9 530 aa16.26■□□□□ 0.19
SMCO4-205ENST00000529714 USP17L21D6R901 530 aa16.26■□□□□ 0.19
SMCO4-205ENST00000529714 HLA-DOAP06340 250 aa16.26■□□□□ 0.19
SMCO4-205ENST00000529714 C12orf60Q5U649 245 aa16.26■□□□□ 0.19
SMCO4-205ENST00000529714 CTR9Q6PD62 1173 aa16.26■□□□□ 0.19
SMCO4-205ENST00000529714 CDC37L1Q7L3B6 337 aa16.26■□□□□ 0.19
SMCO4-205ENST00000529714 KRT26Q7Z3Y9 468 aa16.26■□□□□ 0.19
SMCO4-205ENST00000529714 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
SMCO4-205ENST00000529714 CLEC11AQ9Y240 323 aa16.26■□□□□ 0.19
SMCO4-205ENST00000529714 RBM8AQ9Y5S9 174 aaKnown RBP16.26■□□□□ 0.19
SMCO4-205ENST00000529714 ROBO3Q96MS0 1386 aa16.26■□□□□ 0.19
SMCO4-205ENST00000529714 POLR3DP05423 398 aaPredicted RBP16.25■□□□□ 0.19
SMCO4-205ENST00000529714 POTEIP0CG38 1075 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 POTEJP0CG39 1038 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 IMMTQ16891 758 aaKnown RBP16.25■□□□□ 0.19
SMCO4-205ENST00000529714 SH3BP5LQ7L8J4 393 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 ZFPM1Q8IX07 1006 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 HOOK2Q96ED9 719 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 TEPSINQ96N21 525 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 USP26Q9BXU7 913 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 TMEM39BQ9GZU3 492 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 EHD4Q9H223 541 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 PI4KBQ9UBF8 816 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 SAP30BPQ9UHR5 308 aaKnown RBP16.25■□□□□ 0.19
SMCO4-205ENST00000529714 ANAPC4Q9UJX5 808 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 PALD1Q9ULE6 856 aa16.25■□□□□ 0.19
SMCO4-205ENST00000529714 SIPA1L1O43166 1804 aa16.24■□□□□ 0.19
SMCO4-205ENST00000529714 DDTLA6NHG4 134 aaPredicted RBP16.24■□□□□ 0.19
SMCO4-205ENST00000529714 KIF3CO14782 793 aa16.24■□□□□ 0.19
SMCO4-205ENST00000529714 SEC24BO95487 1268 aa16.24■□□□□ 0.19
SMCO4-205ENST00000529714 PPARAQ07869 468 aa16.24■□□□□ 0.19
SMCO4-205ENST00000529714 NECTIN1Q15223 517 aa16.24■□□□□ 0.19
SMCO4-205ENST00000529714 METTL16Q86W50 562 aaKnown RBP16.24■□□□□ 0.19
SMCO4-205ENST00000529714 ZSCAN29Q8IWY8 852 aaPredicted RBP16.24■□□□□ 0.19
SMCO4-205ENST00000529714 CSRNP1Q96S65 589 aa16.24■□□□□ 0.19
SMCO4-205ENST00000529714 ZNF213O14771 459 aa16.23■□□□□ 0.19
SMCO4-205ENST00000529714 SLC3A2P08195 630 aaKnown RBP16.23■□□□□ 0.19
SMCO4-205ENST00000529714 PCP11498 1178 aaKnown RBP16.23■□□□□ 0.19
SMCO4-205ENST00000529714 MCCP23508 829 aa16.23■□□□□ 0.19
SMCO4-205ENST00000529714 RNF20Q5VTR2 975 aa16.23■□□□□ 0.19
SMCO4-205ENST00000529714 CHADLQ6NUI6 762 aa16.23■□□□□ 0.19
SMCO4-205ENST00000529714 FOXP4Q8IVH2 680 aaPredicted RBP16.23■□□□□ 0.19
SMCO4-205ENST00000529714 ZNF784Q8NCA9 323 aaPredicted RBP16.23■□□□□ 0.19
SMCO4-205ENST00000529714 UPF2Q9HAU5 1272 aaKnown RBP16.23■□□□□ 0.19
SMCO4-205ENST00000529714 HERC5Q9UII4 1024 aaKnown RBP16.23■□□□□ 0.19
SMCO4-205ENST00000529714 SERPINB13Q9UIV8 391 aa16.23■□□□□ 0.19
SMCO4-205ENST00000529714 MINDY4BA8MYZ0 360 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 ADM5C9JUS6 153 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 TBC1D12O60347 775 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 CYP2D6P10635 497 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 HSPA4P34932 840 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 NT5C2P49902 561 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 PLCD1P51178 756 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 MAP3K10Q02779 954 aa16.22■□□□□ 0.19
SMCO4-205ENST00000529714 GABPAQ06546 454 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms