RNA–Protein interactions for RNA: ENST00000529199.1

CTSF-206, Transcript of cathepsin F, humanhuman

TSL 4

Gene CTSF, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSF-206ENST00000529199 A0A1B0GUL7 405 aa24.67■■□□□ 1.54
CTSF-206ENST00000529199 SRGAP3O43295 1099 aa24.67■■□□□ 1.54
CTSF-206ENST00000529199 BTDP43251 543 aa24.67■■□□□ 1.54
CTSF-206ENST00000529199 TFCP2Q12800 502 aa24.67■■□□□ 1.54
CTSF-206ENST00000529199 GADL1Q6ZQY3 521 aa24.67■■□□□ 1.54
CTSF-206ENST00000529199 SH3BP5LQ7L8J4 393 aa24.67■■□□□ 1.54
CTSF-206ENST00000529199 XAGE2Q96GT9 111 aa24.67■■□□□ 1.54
CTSF-206ENST00000529199 NEUROD6Q96NK8 337 aa24.67■■□□□ 1.54
CTSF-206ENST00000529199 AKAP2Q9Y2D5 859 aa24.67■■□□□ 1.54
CTSF-206ENST00000529199 GAKO14976 1311 aa24.66■■□□□ 1.54
CTSF-206ENST00000529199 MYPNQ86TC9 1320 aa24.66■■□□□ 1.54
CTSF-206ENST00000529199 DDTLA6NHG4 134 aaPredicted RBP24.66■■□□□ 1.54
CTSF-206ENST00000529199 SLURP2P0DP57 97 aa24.66■■□□□ 1.54
CTSF-206ENST00000529199 PTPRAP18433 802 aa24.66■■□□□ 1.54
CTSF-206ENST00000529199 GRK4P32298 578 aa24.66■■□□□ 1.54
CTSF-206ENST00000529199 FASTKD5Q7L8L6 764 aaKnown RBP24.66■■□□□ 1.54
CTSF-206ENST00000529199 GNAI3P08754 354 aa24.65■■□□□ 1.54
CTSF-206ENST00000529199 RARSP54136 660 aaKnown RBP24.65■■□□□ 1.54
CTSF-206ENST00000529199 ERICH6Q7L0X2 663 aa24.65■■□□□ 1.54
CTSF-206ENST00000529199 DDX4Q9NQI0 724 aaKnown RBP24.65■■□□□ 1.54
CTSF-206ENST00000529199 FCGRTP55899 365 aa24.64■■□□□ 1.54
CTSF-206ENST00000529199 MVPQ14764 893 aaKnown RBP24.64■■□□□ 1.54
CTSF-206ENST00000529199 FAM163AQ96GL9 167 aaPredicted RBP24.64■■□□□ 1.54
CTSF-206ENST00000529199 AFG3L2Q9Y4W6 797 aa24.64■■□□□ 1.54
CTSF-206ENST00000529199 A0A0G2JLL6 359 aaPredicted RBP24.63■■□□□ 1.53
CTSF-206ENST00000529199 BCRP11274 1271 aa24.63■■□□□ 1.53
CTSF-206ENST00000529199 MECOMQ03112 1051 aa24.63■■□□□ 1.53
CTSF-206ENST00000529199 GORABQ5T7V8 394 aa24.63■■□□□ 1.53
CTSF-206ENST00000529199 PRRT2Q7Z6L0 340 aaPredicted RBP24.63■■□□□ 1.53
CTSF-206ENST00000529199 COLQQ9Y215 455 aaPredicted RBP24.63■■□□□ 1.53
CTSF-206ENST00000529199 ATRNL1Q5VV63 1379 aa24.63■■□□□ 1.53
CTSF-206ENST00000529199 TRIM75PA6NK02 468 aa24.62■■□□□ 1.53
CTSF-206ENST00000529199 H0YGN5 161 aa24.62■■□□□ 1.53
CTSF-206ENST00000529199 ZBTB22O15209 634 aa24.62■■□□□ 1.53
CTSF-206ENST00000529199 CTNND1O60716 968 aaKnown RBP24.62■■□□□ 1.53
CTSF-206ENST00000529199 PRKCZQ05513 592 aa24.62■■□□□ 1.53
CTSF-206ENST00000529199 ARHGAP45Q92619 1136 aa24.62■■□□□ 1.53
CTSF-206ENST00000529199 DPF3Q92784 378 aa24.62■■□□□ 1.53
CTSF-206ENST00000529199 RNF208Q9H0X6 261 aa24.62■■□□□ 1.53
CTSF-206ENST00000529199 MROH7-TTC4A0A0A0MT08 1334 aa24.61■■□□□ 1.53
CTSF-206ENST00000529199 PDS5AQ29RF7 1337 aaKnown RBP24.61■■□□□ 1.53
CTSF-206ENST00000529199 CCL5P13501 91 aa24.61■■□□□ 1.53
CTSF-206ENST00000529199 MAP3K10Q02779 954 aa24.61■■□□□ 1.53
CTSF-206ENST00000529199 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.61■■□□□ 1.53
CTSF-206ENST00000529199 GABRQQ9UN88 632 aa24.61■■□□□ 1.53
CTSF-206ENST00000529199 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.61■■□□□ 1.53
CTSF-206ENST00000529199 GPR75-ASB3A0A0A6YYF3 556 aa24.6■■□□□ 1.53
CTSF-206ENST00000529199 UBXN2AP68543 259 aa24.6■■□□□ 1.53
CTSF-206ENST00000529199 TBC1D9Q6ZT07 1266 aa24.6■■□□□ 1.53
CTSF-206ENST00000529199 CCDC84Q86UT8 332 aaPredicted RBP24.6■■□□□ 1.53
CTSF-206ENST00000529199 NKX2-3Q8TAU0 364 aa24.6■■□□□ 1.53
CTSF-206ENST00000529199 SHISA4Q96DD7 197 aa24.6■■□□□ 1.53
CTSF-206ENST00000529199 HMG20BQ9P0W2 317 aa24.6■■□□□ 1.53
CTSF-206ENST00000529199 CEP290O15078 2479 aa24.6■■□□□ 1.53
CTSF-206ENST00000529199 MYH2Q9UKX2 1941 aa24.59■■□□□ 1.53
CTSF-206ENST00000529199 PI16Q6UXB8 463 aa24.59■■□□□ 1.53
CTSF-206ENST00000529199 SMCR8Q8TEV9 937 aaPredicted RBP24.59■■□□□ 1.53
CTSF-206ENST00000529199 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.59■■□□□ 1.53
CTSF-206ENST00000529199 RAI14Q9P0K7 980 aa24.59■■□□□ 1.53
CTSF-206ENST00000529199 RFX7Q2KHR2 1363 aa24.58■■□□□ 1.53
CTSF-206ENST00000529199 FAM196BA6NMK8 535 aa24.58■■□□□ 1.53
CTSF-206ENST00000529199 LDHCP07864 332 aa24.58■■□□□ 1.53
CTSF-206ENST00000529199 RHBDL3P58872 404 aa24.58■■□□□ 1.53
CTSF-206ENST00000529199 GSTO1P78417 241 aa24.58■■□□□ 1.53
CTSF-206ENST00000529199 MTX1Q13505 466 aa24.58■■□□□ 1.53
CTSF-206ENST00000529199 SPATA5Q8NB90 893 aa24.58■■□□□ 1.53
CTSF-206ENST00000529199 FRAT1Q92837 279 aaPredicted RBP24.58■■□□□ 1.53
CTSF-206ENST00000529199 IPO8O15397 1037 aaKnown RBP24.57■■□□□ 1.52
CTSF-206ENST00000529199 GJB1P08034 283 aa24.57■■□□□ 1.52
CTSF-206ENST00000529199 GJA8P48165 433 aa24.57■■□□□ 1.52
CTSF-206ENST00000529199 FXR1P51114 621 aaKnown RBP eCLIP24.57■■□□□ 1.52
CTSF-206ENST00000529199 G3BP1Q13283 466 aaKnown RBP eCLIP24.57■■□□□ 1.52
CTSF-206ENST00000529199 SLAIN1Q8ND83 568 aa24.57■■□□□ 1.52
CTSF-206ENST00000529199 ZNF384Q8TF68 577 aa24.57■■□□□ 1.52
CTSF-206ENST00000529199 SLC45A1Q9Y2W3 748 aa24.57■■□□□ 1.52
CTSF-206ENST00000529199 TNPO2O14787 897 aaKnown RBP24.56■■□□□ 1.52
CTSF-206ENST00000529199 ADCY3O60266 1144 aa24.56■■□□□ 1.52
CTSF-206ENST00000529199 GNAI2P04899 355 aa24.56■■□□□ 1.52
CTSF-206ENST00000529199 NSUN4Q96CB9 384 aaKnown RBP24.56■■□□□ 1.52
CTSF-206ENST00000529199 TAOK2Q9UL54 1235 aa24.56■■□□□ 1.52
CTSF-206ENST00000529199 TNNQ9UQP3 1299 aa24.56■■□□□ 1.52
CTSF-206ENST00000529199 TBC1D12O60347 775 aa24.55■■□□□ 1.52
CTSF-206ENST00000529199 FLT3LGP49771 235 aa24.55■■□□□ 1.52
CTSF-206ENST00000529199 ANKRD13CQ8N6S4 541 aa24.55■■□□□ 1.52
CTSF-206ENST00000529199 CLUAP1Q96AJ1 413 aa24.55■■□□□ 1.52
CTSF-206ENST00000529199 UNC93B1Q9H1C4 597 aa24.55■■□□□ 1.52
CTSF-206ENST00000529199 ELNP15502 786 aa24.54■■□□□ 1.52
CTSF-206ENST00000529199 LRP2BPQ9P2M1 347 aa24.54■■□□□ 1.52
CTSF-206ENST00000529199 AGTPBP1Q9UPW5 1226 aa24.54■■□□□ 1.52
CTSF-206ENST00000529199 BCAR3O75815 825 aa24.53■■□□□ 1.52
CTSF-206ENST00000529199 TRIM27P14373 513 aa24.53■■□□□ 1.52
CTSF-206ENST00000529199 SPP2Q13103 211 aa24.53■■□□□ 1.52
CTSF-206ENST00000529199 TREML2Q5T2D2 321 aa24.53■■□□□ 1.52
CTSF-206ENST00000529199 CHRDL2Q6WN34 429 aa24.53■■□□□ 1.52
CTSF-206ENST00000529199 DOCK2Q92608 1830 aa24.52■■□□□ 1.52
CTSF-206ENST00000529199 PNMA6EA0A0J9YXQ4 647 aa24.52■■□□□ 1.52
CTSF-206ENST00000529199 NPM3O75607 178 aaKnown RBP24.52■■□□□ 1.52
CTSF-206ENST00000529199 ARID4AP29374 1257 aaPredicted RBP24.52■■□□□ 1.52
CTSF-206ENST00000529199 ATF7IPQ6VMQ6 1270 aa24.52■■□□□ 1.52
CTSF-206ENST00000529199 TEX11Q8IYF3 940 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms