RNA–Protein interactions for RNA: ENST00000529058.1

TRIM3-208, Transcript of tripartite motif containing 3, humanhuman

TSL 3

Gene TRIM3, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-208ENST00000529058 SUGT1Q9Y2Z0 365 aa17.77■□□□□ 0.44
TRIM3-208ENST00000529058 ZHX2Q9Y6X8 837 aa17.77■□□□□ 0.44
TRIM3-208ENST00000529058 PHIPQ8WWQ0 1821 aa17.77■□□□□ 0.43
TRIM3-208ENST00000529058 PFASO15067 1338 aa17.76■□□□□ 0.43
TRIM3-208ENST00000529058 MDM2Q00987 491 aaPredicted RBP17.76■□□□□ 0.43
TRIM3-208ENST00000529058 TWISTNBQ3B726 338 aaPredicted RBP17.76■□□□□ 0.43
TRIM3-208ENST00000529058 CAVIN4Q5BKX8 364 aa17.76■□□□□ 0.43
TRIM3-208ENST00000529058 ZNF697Q5TEC3 545 aa17.76■□□□□ 0.43
TRIM3-208ENST00000529058 TSR2Q969E8 191 aaKnown RBP17.76■□□□□ 0.43
TRIM3-208ENST00000529058 DOCK2Q92608 1830 aa17.76■□□□□ 0.43
TRIM3-208ENST00000529058 MYH13Q9UKX3 1938 aa17.76■□□□□ 0.43
TRIM3-208ENST00000529058 PTPRAP18433 802 aa17.75■□□□□ 0.43
TRIM3-208ENST00000529058 FAM110CQ1W6H9 321 aa17.75■□□□□ 0.43
TRIM3-208ENST00000529058 SCYL3Q8IZE3 742 aa17.75■□□□□ 0.43
TRIM3-208ENST00000529058 PUS3Q9BZE2 481 aaKnown RBP17.75■□□□□ 0.43
TRIM3-208ENST00000529058 PICK1Q9NRD5 415 aa17.75■□□□□ 0.43
TRIM3-208ENST00000529058 AFG3L2Q9Y4W6 797 aa17.75■□□□□ 0.43
TRIM3-208ENST00000529058 COL9A1P20849 921 aa17.74■□□□□ 0.43
TRIM3-208ENST00000529058 TRIM32Q13049 653 aa17.74■□□□□ 0.43
TRIM3-208ENST00000529058 MUC3AQ02505 3323 aa17.74■□□□□ 0.43
TRIM3-208ENST00000529058 MROH5Q6ZUA9 1318 aa17.73■□□□□ 0.43
TRIM3-208ENST00000529058 DOCK1Q14185 1865 aa17.73■□□□□ 0.43
TRIM3-208ENST00000529058 PLXNB2O15031 1838 aa17.73■□□□□ 0.43
TRIM3-208ENST00000529058 PHF20L1A8MW92 1017 aa17.73■□□□□ 0.43
TRIM3-208ENST00000529058 NFIAQ12857 509 aa17.73■□□□□ 0.43
TRIM3-208ENST00000529058 CDC42EP5Q6NZY7 148 aa17.73■□□□□ 0.43
TRIM3-208ENST00000529058 MAFAQ8NHW3 353 aaPredicted RBP17.73■□□□□ 0.43
TRIM3-208ENST00000529058 SYMPKQ92797 1274 aaKnown RBP17.73■□□□□ 0.43
TRIM3-208ENST00000529058 BEND3Q5T5X7 828 aa17.72■□□□□ 0.43
TRIM3-208ENST00000529058 CDX2Q99626 313 aaPredicted RBP17.72■□□□□ 0.43
TRIM3-208ENST00000529058 FAM198AQ9UFP1 575 aa17.72■□□□□ 0.43
TRIM3-208ENST00000529058 AGTPBP1Q9UPW5 1226 aa17.72■□□□□ 0.43
TRIM3-208ENST00000529058 CDH23Q9H251 3354 aa17.71■□□□□ 0.43
TRIM3-208ENST00000529058 ATRNL1Q5VV63 1379 aa17.71■□□□□ 0.43
TRIM3-208ENST00000529058 GRM8O00222 908 aa17.71■□□□□ 0.43
TRIM3-208ENST00000529058 COL6A1P12109 1028 aa17.71■□□□□ 0.43
TRIM3-208ENST00000529058 GJD2Q9UKL4 321 aa17.71■□□□□ 0.43
TRIM3-208ENST00000529058 PNMA3Q9UL41 463 aa17.71■□□□□ 0.43
TRIM3-208ENST00000529058 DAGLAQ9Y4D2 1042 aa17.71■□□□□ 0.43
TRIM3-208ENST00000529058 TRIM75PA6NK02 468 aa17.7■□□□□ 0.42
TRIM3-208ENST00000529058 LRRC26Q2I0M4 334 aa17.7■□□□□ 0.42
TRIM3-208ENST00000529058 TRIB2Q92519 343 aa17.7■□□□□ 0.42
TRIM3-208ENST00000529058 DNAH12Q6ZR08 3092 aa17.69■□□□□ 0.42
TRIM3-208ENST00000529058 F6X3S4 739 aa17.69■□□□□ 0.42
TRIM3-208ENST00000529058 MAP3K21Q5TCX8 1036 aa17.69■□□□□ 0.42
TRIM3-208ENST00000529058 ZFPM1Q8IX07 1006 aa17.69■□□□□ 0.42
TRIM3-208ENST00000529058 MAST2Q6P0Q8 1798 aa17.68■□□□□ 0.42
TRIM3-208ENST00000529058 PRKAR2AP13861 404 aaKnown RBP17.68■□□□□ 0.42
TRIM3-208ENST00000529058 GCLCP48506 637 aaPredicted RBP17.68■□□□□ 0.42
TRIM3-208ENST00000529058 METTL24Q5JXM2 366 aa17.68■□□□□ 0.42
TRIM3-208ENST00000529058 TREML2Q5T2D2 321 aa17.68■□□□□ 0.42
TRIM3-208ENST00000529058 LBHD1Q9BQE6 289 aaPredicted RBP17.68■□□□□ 0.42
TRIM3-208ENST00000529058 SEMA6BQ9H3T3 888 aa17.68■□□□□ 0.42
TRIM3-208ENST00000529058 USP40Q9NVE5 1235 aa17.68■□□□□ 0.42
TRIM3-208ENST00000529058 C9orf78Q9NZ63 289 aaPredicted RBP17.68■□□□□ 0.42
TRIM3-208ENST00000529058 LRRFIP2Q9Y608 721 aaKnown RBP17.68■□□□□ 0.42
TRIM3-208ENST00000529058 LOC285556D6RIA3 1793 aa17.68■□□□□ 0.42
TRIM3-208ENST00000529058 DIXDC1Q155Q3 683 aa17.67■□□□□ 0.42
TRIM3-208ENST00000529058 VGLL2Q8N8G2 317 aa17.67■□□□□ 0.42
TRIM3-208ENST00000529058 PROCA1Q8NCQ7 364 aaPredicted RBP17.67■□□□□ 0.42
TRIM3-208ENST00000529058 WDR66Q8TBY9 1149 aa17.67■□□□□ 0.42
TRIM3-208ENST00000529058 FRMPD3Q5JV73 1810 aa17.67■□□□□ 0.42
TRIM3-208ENST00000529058 CTNND1O60716 968 aaKnown RBP17.66■□□□□ 0.42
TRIM3-208ENST00000529058 PDE8BO95263 885 aa17.66■□□□□ 0.42
TRIM3-208ENST00000529058 CYP2B6P20813 491 aa17.66■□□□□ 0.42
TRIM3-208ENST00000529058 LRRC24Q50LG9 513 aa17.66■□□□□ 0.42
TRIM3-208ENST00000529058 MYLIPQ8WY64 445 aa17.66■□□□□ 0.42
TRIM3-208ENST00000529058 KIF16BQ96L93 1317 aa17.66■□□□□ 0.42
TRIM3-208ENST00000529058 LTBP2Q14767 1821 aa17.65■□□□□ 0.42
TRIM3-208ENST00000529058 MAP3K10Q02779 954 aa17.65■□□□□ 0.42
TRIM3-208ENST00000529058 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.65■□□□□ 0.42
TRIM3-208ENST00000529058 MYH2Q9UKX2 1941 aa17.64■□□□□ 0.42
TRIM3-208ENST00000529058 ENTPD3O75355 529 aa17.64■□□□□ 0.41
TRIM3-208ENST00000529058 RGS3P49796 1198 aa17.64■□□□□ 0.41
TRIM3-208ENST00000529058 LHX8Q68G74 356 aa17.64■□□□□ 0.41
TRIM3-208ENST00000529058 CCDC84Q86UT8 332 aaPredicted RBP17.64■□□□□ 0.41
TRIM3-208ENST00000529058 KAZALD1Q96I82 304 aa17.64■□□□□ 0.41
TRIM3-208ENST00000529058 SUCLG2Q96I99 432 aa17.64■□□□□ 0.41
TRIM3-208ENST00000529058 SPINK5Q9NQ38 1064 aaPredicted RBP17.64■□□□□ 0.41
TRIM3-208ENST00000529058 TNFRSF10AO00220 468 aa17.63■□□□□ 0.41
TRIM3-208ENST00000529058 IFIT1P09914 478 aaKnown RBP17.63■□□□□ 0.41
TRIM3-208ENST00000529058 XRCC5P13010 732 aaKnown RBP17.63■□□□□ 0.41
TRIM3-208ENST00000529058 FOSL2P15408 326 aa17.63■□□□□ 0.41
TRIM3-208ENST00000529058 PRDX5P30044 214 aa17.63■□□□□ 0.41
TRIM3-208ENST00000529058 CACNB2Q08289 660 aaPredicted RBP17.63■□□□□ 0.41
TRIM3-208ENST00000529058 PABPC4Q13310 644 aaKnown RBP eCLIP17.63■□□□□ 0.41
TRIM3-208ENST00000529058 SH3BP5LQ7L8J4 393 aa17.63■□□□□ 0.41
TRIM3-208ENST00000529058 ZSCAN29Q8IWY8 852 aaPredicted RBP17.63■□□□□ 0.41
TRIM3-208ENST00000529058 IDI2Q9BXS1 227 aa17.63■□□□□ 0.41
TRIM3-208ENST00000529058 RAPGEFL1Q9UHV5 662 aa17.63■□□□□ 0.41
TRIM3-208ENST00000529058 ATAD5Q96QE3 1844 aa17.63■□□□□ 0.41
TRIM3-208ENST00000529058 SLURP2P0DP57 97 aa17.62■□□□□ 0.41
TRIM3-208ENST00000529058 TJAP1Q5JTD0 557 aa17.62■□□□□ 0.41
TRIM3-208ENST00000529058 TRMT44Q8IYL2 757 aaKnown RBP17.62■□□□□ 0.41
TRIM3-208ENST00000529058 NUDT12Q9BQG2 462 aa17.62■□□□□ 0.41
TRIM3-208ENST00000529058 ASCC2Q9H1I8 757 aaPredicted RBP17.62■□□□□ 0.41
TRIM3-208ENST00000529058 DDTLA6NHG4 134 aaPredicted RBP17.61■□□□□ 0.41
TRIM3-208ENST00000529058 ALDH1L1O75891 902 aa17.61■□□□□ 0.41
TRIM3-208ENST00000529058 LDHBP07195 334 aaKnown RBP17.61■□□□□ 0.41
TRIM3-208ENST00000529058 ZKSCAN1P17029 563 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms