RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 SHROOM2Q13796 1616 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 KCNA6P17658 529 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 MXRA7P84157 204 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 MCTP2Q6DN12 878 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 CYP26C1Q6V0L0 522 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 CCDC63Q8NA47 563 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 PICK1Q9NRD5 415 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 JAG2Q9Y219 1238 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 CLASP1Q7Z460 1538 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 B4E1Z4 1266 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 SMTNP53814 917 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 KARSQ15046 597 aaKnown RBP9.53□□□□□ -0.88
CTNND1-219ENST00000528621 LETM2Q2VYF4 491 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 MSL1Q68DK7 614 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 CCDC26Q8TAB7 109 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 LPIN2Q92539 896 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 CCNL1Q9UK58 526 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-219ENST00000528621 IBTKQ9P2D0 1353 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-219ENST00000528621 FAM135BQ49AJ0 1406 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 PPP1R7Q15435 360 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 ANO1Q5XXA6 986 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 KRT25Q7Z3Z0 450 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 SH3TC1Q8TE82 1336 aa9.53□□□□□ -0.88
CTNND1-219ENST00000528621 KRT5P13647 590 aa9.52□□□□□ -0.88
CTNND1-219ENST00000528621 ALDH3A1P30838 453 aa9.52□□□□□ -0.88
CTNND1-219ENST00000528621 TERF1P54274 439 aa9.52□□□□□ -0.88
CTNND1-219ENST00000528621 CDAN1Q8IWY9 1227 aa9.52□□□□□ -0.88
CTNND1-219ENST00000528621 ARFGAP2Q8N6H7 521 aa9.52□□□□□ -0.88
CTNND1-219ENST00000528621 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.52□□□□□ -0.88
CTNND1-219ENST00000528621 NOC4LQ9BVI4 516 aaKnown RBP9.52□□□□□ -0.88
CTNND1-219ENST00000528621 SNX14Q9Y5W7 946 aa9.52□□□□□ -0.88
CTNND1-219ENST00000528621 RAPGEF1Q13905 1077 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 PIK3AP1Q6ZUJ8 805 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 CCDC114Q96M63 670 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 DSCC1Q9BVC3 393 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 CEP170Q5SW79 1584 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 BACH1O14867 736 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 XRCC6P12956 609 aaKnown RBP eCLIP9.52□□□□□ -0.892e-8■□□□□ 8.5
CTNND1-219ENST00000528621 FCHSD1Q86WN1 690 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 BAG1Q99933 345 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-219ENST00000528621 KCNG1Q9UIX4 513 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 KDRP35968 1356 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 ERVV-2B6SEH9 535 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 PER1O15534 1290 aaPredicted RBP9.52□□□□□ -0.89
CTNND1-219ENST00000528621 STX10O60499 249 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 AKNAD1Q5T1N1 836 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 G2E3Q7L622 706 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 ANGEL1Q9UNK9 670 aaKnown RBP9.52□□□□□ -0.89
CTNND1-219ENST00000528621 NLRP12P59046 1061 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 PDE4DQ08499 809 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 ASIC2Q16515 512 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 NBPF11Q86T75 865 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 LZTFL1Q9NQ48 299 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 CCDC87Q9NVE4 849 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 STK32BQ9NY57 414 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 ATP6V0A2Q9Y487 856 aa9.52□□□□□ -0.89
CTNND1-219ENST00000528621 CFAP58Q5T655 872 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 HDXQ7Z353 690 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 CROCCP2Q86T23 111 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 USP19O94966 1318 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 MLKLQ8NB16 471 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 ZMYND15Q9H091 742 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 SYNRGQ9UMZ2 1314 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 GAS8O95995 478 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 FAM89AQ96GI7 184 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 FNBP1Q96RU3 617 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 A0A1B0GVL5 298 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 A6NNZ2 444 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 ATP2C2O75185 946 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 ADCY7P51828 1080 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 STRN3Q13033 797 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 GCKRQ14397 625 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 TUBB8Q3ZCM7 444 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 LIN9Q5TKA1 542 aa9.51□□□□□ -0.89
CTNND1-219ENST00000528621 RAB3IL1Q8TBN0 382 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 PKD2L1Q9P0L9 805 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 KDM2BQ8NHM5 1336 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 PDE6BP35913 854 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 CTDSPL2Q05D32 466 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 SYT10Q6XYQ8 523 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 SPATA5Q8NB90 893 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 SUCLG2Q96I99 432 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 IFT74Q96LB3 600 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 TIGD1Q96MW7 591 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 TSKSQ9UJT2 592 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 CHMP2AO43633 222 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 PLCB3Q01970 1234 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 GPR161Q8N6U8 529 aaKnown RBP9.5□□□□□ -0.89
CTNND1-219ENST00000528621 KBTBD3Q8NAB2 608 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 FBF1Q8TES7 1133 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 KCNH3Q9ULD8 1083 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 GJA3Q9Y6H8 435 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 SGSM2O43147 1006 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 TNFAIP3P21580 790 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 ARL1P40616 181 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-219ENST00000528621 TBC1D22AQ8WUA7 517 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 IFT81Q8WYA0 676 aa9.5□□□□□ -0.89
CTNND1-219ENST00000528621 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.5□□□□□ -0.89
CTNND1-219ENST00000528621 V9GYY5 206 aaPredicted RBP9.5□□□□□ -0.89
CTNND1-219ENST00000528621 GPAA1O43292 621 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms