RNA–Protein interactions for RNA: ENST00000528614.1

AP002008.3-201, humanhuman

TSL 1 (best) BASIC

Gene AP002008.3, Length 2,587 nt, Biotype sense intronic.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002008.3-201ENST00000528614 TIGD1Q96MW7 591 aa12.15□□□□□ -0.46
AP002008.3-201ENST00000528614 KRT23Q9C075 422 aa12.15□□□□□ -0.46
AP002008.3-201ENST00000528614 CNNM2Q9H8M5 875 aa12.15□□□□□ -0.46
AP002008.3-201ENST00000528614 SLC4A4Q9Y6R1 1079 aa12.15□□□□□ -0.46
AP002008.3-201ENST00000528614 USP27XA6NNY8 438 aa12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 SMTNL1A8MU46 457 aa12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 ATP6V1AP38606 617 aa12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 CRKLP46109 303 aaKnown RBP12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 STK11IPQ8N1F8 1099 aa12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 JMYQ8N9B5 988 aa12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 CLIC6Q96NY7 704 aa12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 ZKSCAN3Q9BRR0 538 aa12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 XPO4Q9C0E2 1151 aaKnown RBP12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 TOMM22Q9NS69 142 aa12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 IFNKQ9P0W0 207 aa12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 HPSEQ9Y251 543 aa12.15□□□□□ -0.47
AP002008.3-201ENST00000528614 SMC2O95347 1197 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 IGHMBP2P38935 993 aaKnown RBP12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 TDO2P48775 406 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 NCAPHQ15003 741 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 CCDC152Q4G0S7 254 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 PAXBP1Q9Y5B6 917 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 CAMTA2O94983 1202 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 GUCY1A2P33402 732 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 RESP18Q5W5W9 173 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 CEP135Q66GS9 1140 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 ACSBG1Q96GR2 724 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 NACAP1Q9BZK3 213 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 OSBPL5Q9H0X9 879 aaPredicted RBP12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 IMPACTQ9P2X3 320 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 TUBE1Q9UJT0 475 aa12.14□□□□□ -0.47
AP002008.3-201ENST00000528614 LRP5O75197 1615 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 IFNAR1P17181 557 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 GNAT2P19087 354 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 GSDMDP57764 484 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 TPM4P67936 248 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 PARP10Q53GL7 1025 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 MIGA1Q8NAN2 632 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 STAG1Q8WVM7 1258 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 CCDC94Q9BW85 323 aaPredicted RBP12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 LRP2BPQ9P2M1 347 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 STK36Q9NRP7 1315 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 FAM237AA0A1B0GTK4 181 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 CUTAO60888 179 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 PNOCQ13519 176 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 WTAPQ15007 396 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 ZNF592Q92610 1267 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 TRMT1Q9NXH9 659 aaKnown RBP12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 NIP7Q9Y221 180 aaKnown RBP eCLIP12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 PNPLA7Q6ZV29 1317 aa12.13□□□□□ -0.47
AP002008.3-201ENST00000528614 BTBD18B2RXH4 712 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 COL14A1Q05707 1796 aaKnown RBP12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 CHRNDQ07001 517 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 TMC6Q7Z403 805 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 CCDC82Q8N4S0 544 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 ANKRD7Q92527 254 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 WASF1Q92558 559 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 KCNJ14Q9UNX9 436 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 IQSEC3Q9UPP2 1182 aaPredicted RBP12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 NTSR2O95665 410 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 LMOD1P29536 600 aaPredicted RBP12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 ITPK1Q13572 414 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 SART3Q15020 963 aaKnown RBP12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 PTPN14Q15678 1187 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 RTN1Q16799 776 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 LONRF3Q496Y0 759 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 PAXIP1Q6ZW49 1069 aaPredicted RBP12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 NOSTRINQ8IVI9 506 aa12.12□□□□□ -0.47
AP002008.3-201ENST00000528614 LOC102724428A0A0B4J2F2 783 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 ERICH2A1L162 156 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 IKBKBO14920 756 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 MMP1P03956 469 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 CYP7A1P22680 504 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 SIK1P57059 783 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 FANCCQ00597 558 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 DDB1Q16531 1140 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 CCAR2Q8N163 923 aaKnown RBP12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 CMTR1Q8N1G2 835 aaKnown RBP12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 CCDC112Q8NEF3 446 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 KCNH3Q9ULD8 1083 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 ARAP2Q8WZ64 1704 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 TOB1P50616 345 aaPredicted RBP12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 SAFBQ15424 915 aaKnown RBP eCLIP12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 SPECC1Q5M775 1068 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 ARMCX5Q6P1M9 558 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 NYAP1Q6ZVC0 841 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 METTL16Q86W50 562 aaKnown RBP12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 FOXP4Q8IVH2 680 aaPredicted RBP12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 DIS3L2Q8IYB7 885 aaKnown RBP12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 TRIM22Q8IYM9 498 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 PDCL2Q8N4E4 241 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 HSD3B7Q9H2F3 369 aa12.11□□□□□ -0.47
AP002008.3-201ENST00000528614 ATP1A3P13637 1013 aa12.1□□□□□ -0.47
AP002008.3-201ENST00000528614 PPARAQ07869 468 aa12.1□□□□□ -0.47
AP002008.3-201ENST00000528614 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
AP002008.3-201ENST00000528614 KRBA2Q6ZNG9 492 aa12.1□□□□□ -0.47
AP002008.3-201ENST00000528614 ADGRA1Q86SQ6 560 aa12.1□□□□□ -0.47
AP002008.3-201ENST00000528614 TMTC2Q8N394 836 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms