RNA–Protein interactions for RNA: ENST00000528593.1

CKAP5-209, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 2

Gene CKAP5, Length 366 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-209ENST00000528593 BMP4P12644 408 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 SEC13P55735 322 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 RASSF7Q02833 373 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 USP17L24Q0WX57 530 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 ERICH6BQ5W0A0 696 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 C1orf229Q6ZS94 237 aaPredicted RBP7.45□□□□□ -1.22
CKAP5-209ENST00000528593 GOLGA6L1Q8N7Z2 621 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 PANK1Q8TE04 598 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 SCARF2Q96GP6 870 aaPredicted RBP7.45□□□□□ -1.22
CKAP5-209ENST00000528593 QTRT2Q9H974 415 aaKnown RBP7.45□□□□□ -1.22
CKAP5-209ENST00000528593 KDM3BQ7LBC6 1761 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 SCN11AQ9UI33 1791 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 GLI3P10071 1580 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 HEG1Q9ULI3 1381 aa7.45□□□□□ -1.22
CKAP5-209ENST00000528593 DCDC2BA2VCK2 349 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 PRAMEF22A3QJZ6 481 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 SHISA8B8ZZ34 492 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 IPO8O15397 1037 aaKnown RBP7.44□□□□□ -1.22
CKAP5-209ENST00000528593 RLBP1P12271 317 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 EIF2S2P20042 333 aaKnown RBP7.44□□□□□ -1.22
CKAP5-209ENST00000528593 MARSP56192 900 aaKnown RBP7.44□□□□□ -1.22
CKAP5-209ENST00000528593 LAMC2Q13753 1193 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 PDE3AQ14432 1141 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 CCDC30Q5VVM6 783 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 KANK3Q6NY19 840 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 ATF7IPQ6VMQ6 1270 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 PIGBQ92521 554 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 SYTL4Q96C24 671 aaPredicted RBP7.44□□□□□ -1.22
CKAP5-209ENST00000528593 ACSBG1Q96GR2 724 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 ZNF496Q96IT1 587 aaPredicted RBP7.44□□□□□ -1.22
CKAP5-209ENST00000528593 FMNL2Q96PY5 1086 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 ARXQ96QS3 562 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 STK31Q9BXU1 1019 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 AVENQ9NQS1 362 aaPredicted RBP7.44□□□□□ -1.22
CKAP5-209ENST00000528593 TOGARAM1Q9Y4F4 1720 aa7.44□□□□□ -1.22
CKAP5-209ENST00000528593 SIPA1L3O60292 1781 aaPredicted RBP7.43□□□□□ -1.22
CKAP5-209ENST00000528593 TRIM27P14373 513 aa7.43□□□□□ -1.22
CKAP5-209ENST00000528593 LMOD1P29536 600 aaPredicted RBP7.43□□□□□ -1.22
CKAP5-209ENST00000528593 G2E3Q7L622 706 aa7.43□□□□□ -1.22
CKAP5-209ENST00000528593 FTSJ3Q8IY81 847 aaKnown RBP7.43□□□□□ -1.22
CKAP5-209ENST00000528593 DZIP1LQ8IYY4 767 aaKnown RBP7.43□□□□□ -1.22
CKAP5-209ENST00000528593 C2orf49Q9BVC5 232 aaPredicted RBP7.43□□□□□ -1.22
CKAP5-209ENST00000528593 PPP4R2Q9NY27 417 aa7.43□□□□□ -1.22
CKAP5-209ENST00000528593 ZNF232Q9UNY5 417 aa7.43□□□□□ -1.22
CKAP5-209ENST00000528593 THSD7AQ9UPZ6 1657 aa7.43□□□□□ -1.22
CKAP5-209ENST00000528593 BCL9O00512 1426 aa7.43□□□□□ -1.22
CKAP5-209ENST00000528593 PTCD1O75127 700 aaKnown RBP7.42□□□□□ -1.22
CKAP5-209ENST00000528593 SNRPA1P09661 255 aaKnown RBP7.42□□□□□ -1.22
CKAP5-209ENST00000528593 HOXB4P17483 251 aaPredicted RBP7.42□□□□□ -1.22
CKAP5-209ENST00000528593 DPYDQ12882 1025 aa7.42□□□□□ -1.22
CKAP5-209ENST00000528593 ZNF772Q68DY9 489 aaPredicted RBP7.42□□□□□ -1.22
CKAP5-209ENST00000528593 BICDL1Q6ZP65 573 aa7.42□□□□□ -1.22
CKAP5-209ENST00000528593 ANKMY2Q8IV38 441 aa7.42□□□□□ -1.22
CKAP5-209ENST00000528593 ARHGAP45Q92619 1136 aa7.42□□□□□ -1.22
CKAP5-209ENST00000528593 CHMP4AQ9BY43 222 aa7.42□□□□□ -1.22
CKAP5-209ENST00000528593 API5Q9BZZ5 524 aaKnown RBP7.42□□□□□ -1.22
CKAP5-209ENST00000528593 VRTNQ9H8Y1 702 aa7.42□□□□□ -1.22
CKAP5-209ENST00000528593 ATG3Q9NT62 314 aa7.42□□□□□ -1.22
CKAP5-209ENST00000528593 CHPF2Q9P2E5 772 aa7.42□□□□□ -1.22
CKAP5-209ENST00000528593 ASAP1Q9ULH1 1129 aa7.42□□□□□ -1.22
CKAP5-209ENST00000528593 RBM19Q9Y4C8 960 aaKnown RBP7.42□□□□□ -1.22
CKAP5-209ENST00000528593 KCPQ6ZWJ8 1503 aa7.42□□□□□ -1.22
CKAP5-209ENST00000528593 KHNYNO15037 678 aaKnown RBP7.41□□□□□ -1.22
CKAP5-209ENST00000528593 KCNQ2O43526 872 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 PPP1R12BO60237 982 aaPredicted RBP7.41□□□□□ -1.22
CKAP5-209ENST00000528593 ANXA1P04083 346 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 CD33P20138 364 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 PROSER3Q2NL68 480 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 ITPRIPQ8IWB1 547 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 TMEM151AQ8N4L1 468 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 TMEM57Q8N5G2 664 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 PHAXQ9H814 394 aaKnown RBP7.41□□□□□ -1.22
CKAP5-209ENST00000528593 DBF4Q9UBU7 674 aaPredicted RBP7.41□□□□□ -1.22
CKAP5-209ENST00000528593 KLF15Q9UIH9 416 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 GGA1Q9UJY5 639 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 USP16Q9Y5T5 823 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 GJA3Q9Y6H8 435 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 PTPRCP08575 1304 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 PAPPAQ13219 1627 aa7.41□□□□□ -1.22
CKAP5-209ENST00000528593 GDF11O95390 407 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 EPXP11678 715 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 IGFBP4P22692 258 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 IRS1P35568 1242 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 RBM6P78332 1123 aaKnown RBP7.4□□□□□ -1.22
CKAP5-209ENST00000528593 FKBP5Q13451 457 aaPredicted RBP7.4□□□□□ -1.22
CKAP5-209ENST00000528593 MVPQ14764 893 aaKnown RBP7.4□□□□□ -1.22
CKAP5-209ENST00000528593 ZNF468Q5VIY5 522 aaPredicted RBP7.4□□□□□ -1.22
CKAP5-209ENST00000528593 B4GALNT3Q6L9W6 998 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 LRRC69Q6ZNQ3 347 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 GALNT6Q8NCL4 622 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 NEDD1Q8NHV4 660 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 RHPN1Q8TCX5 695 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 EDARADDQ8WWZ3 215 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 MDFIQ99750 246 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 PHACTR1Q9C0D0 580 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 CHMP3Q9Y3E7 222 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 DNMT3AQ9Y6K1 912 aaPredicted RBP7.4□□□□□ -1.22
CKAP5-209ENST00000528593 ABCC4O15439 1325 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 RGS12O14924 1447 aa7.4□□□□□ -1.22
CKAP5-209ENST00000528593 DOT1LQ8TEK3 1739 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms