RNA–Protein interactions for RNA: ENST00000528246.5

MSRA-210, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 1 (best) BASIC

Gene MSRA, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-210ENST00000528246 RIPOR2Q9Y4F9 1068 aa11.83□□□□□ -0.52
MSRA-210ENST00000528246 SHANK3Q9BYB0 1731 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 A0A0G2JLW4 131 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 EFCAB8A8MWE9 144 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 KIF28PB7ZC32 967 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 STX10O60499 249 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 WDHD1O75717 1129 aaPredicted RBP11.82□□□□□ -0.52
MSRA-210ENST00000528246 POLR3DP05423 398 aaPredicted RBP11.82□□□□□ -0.52
MSRA-210ENST00000528246 SLFN14P0C7P3 912 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 ARID4AP29374 1257 aaPredicted RBP11.82□□□□□ -0.52
MSRA-210ENST00000528246 UBASH3AP57075 661 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 TRIM29Q14134 588 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 PPP2R5BQ15173 497 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 NTRK3Q16288 839 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 KRT40Q6A162 431 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 TMED8Q6PL24 325 aaPredicted RBP11.82□□□□□ -0.52
MSRA-210ENST00000528246 MLKLQ8NB16 471 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 ARID3AQ99856 593 aa11.82□□□□□ -0.52
MSRA-210ENST00000528246 PUS7LQ9H0K6 701 aaKnown RBP11.82□□□□□ -0.52
MSRA-210ENST00000528246 MROH7-TTC4A0A0A0MT08 1334 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 SPATA31A1Q5TZJ5 1347 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 CCDC66A2RUB6 948 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 ZAP70P43403 619 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 TBX2Q13207 712 aaPredicted RBP11.81□□□□□ -0.52
MSRA-210ENST00000528246 ELF2Q15723 593 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 SHC4Q6S5L8 630 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 KRBA2Q6ZNG9 492 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 CHST3Q7LGC8 479 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 CCDC34Q96HJ3 373 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 CARD10Q9BWT7 1032 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 PUS3Q9BZE2 481 aaKnown RBP11.81□□□□□ -0.52
MSRA-210ENST00000528246 TRMT1Q9NXH9 659 aaKnown RBP11.81□□□□□ -0.52
MSRA-210ENST00000528246 ANKRD36CQ5JPF3 1778 aa11.81□□□□□ -0.52
MSRA-210ENST00000528246 COL5A2P05997 1499 aaPredicted RBP11.81□□□□□ -0.52
MSRA-210ENST00000528246 DOCK2Q92608 1830 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 ZBTB43O43298 467 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 IFNAR1P17181 557 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 IARSP41252 1262 aaKnown RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 PIP4K2AP48426 406 aaPredicted RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 TUBB2AQ13885 445 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 RILPL1Q5EBL4 403 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 TRIM65Q6PJ69 517 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 KIF6Q6ZMV9 814 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 TMTC2Q8N394 836 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 VGLL2Q8N8G2 317 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 KRI1Q8N9T8 703 aaKnown RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 ENOX1Q8TC92 643 aaKnown RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 IGDCC4Q8TDY8 1250 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 ZNF594Q96JF6 807 aaPredicted RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 TUBB2BQ9BVA1 445 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 NBPF3Q9H094 633 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 FOXP1Q9H334 677 aaPredicted RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 ECM29Q5VYK3 1845 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 MYH3P11055 1940 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 CCDC196A0A1B0GTZ2 297 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 FMNL1O95466 1100 aaPredicted RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 SERPINC1P01008 464 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 A1BGP04217 495 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 TOP1P11387 765 aaKnown RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 GNAT2P19087 354 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 ERCC5P28715 1186 aaPredicted RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 ADORA1P30542 326 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 SARSP49591 514 aaKnown RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 FOSBP53539 338 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 MDM2Q00987 491 aaPredicted RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 TAF7LQ5H9L4 462 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 SYT10Q6XYQ8 523 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 GIGYF2Q6Y7W6 1299 aaKnown RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.8□□□□□ -0.52
MSRA-210ENST00000528246 KRT23Q9C075 422 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 GPHNQ9NQX3 736 aaPredicted RBP11.8□□□□□ -0.52
MSRA-210ENST00000528246 KCNH3Q9ULD8 1083 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 CEP131Q9UPN4 1083 aa11.8□□□□□ -0.52
MSRA-210ENST00000528246 ZRANB2O95218 330 aaKnown RBP eCLIP11.79□□□□□ -0.52
MSRA-210ENST00000528246 ZNF18P17022 549 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 PTPREP23469 700 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 MCAMP43121 646 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 HAND2P61296 217 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 SCARF1Q14162 830 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 SAFBQ15424 915 aaKnown RBP eCLIP11.79□□□□□ -0.52
MSRA-210ENST00000528246 JAKMIP3Q5VZ66 844 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 OTUD7BQ6GQQ9 843 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 METTL16Q86W50 562 aaKnown RBP11.79□□□□□ -0.52
MSRA-210ENST00000528246 NOSTRINQ8IVI9 506 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 SPATA20Q8TB22 786 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 UBXN4Q92575 508 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 NAA15Q9BXJ9 866 aaKnown RBP11.79□□□□□ -0.52
MSRA-210ENST00000528246 LY9Q9HBG7 655 aa11.79□□□□□ -0.52
MSRA-210ENST00000528246 IQSEC3Q9UPP2 1182 aaPredicted RBP11.79□□□□□ -0.52
MSRA-210ENST00000528246 TNS1Q9HBL0 1735 aaKnown RBP11.78□□□□□ -0.52
MSRA-210ENST00000528246 TCRBV5S4A2TA0A5A2 114 aa11.78□□□□□ -0.52
MSRA-210ENST00000528246 ANKRD18BA2A2Z9 1011 aa11.78□□□□□ -0.52
MSRA-210ENST00000528246 PATL2C9JE40 543 aaKnown RBP11.78□□□□□ -0.52
MSRA-210ENST00000528246 SEMA3EO15041 775 aa11.78□□□□□ -0.52
MSRA-210ENST00000528246 IL2RBP14784 551 aa11.78□□□□□ -0.52
MSRA-210ENST00000528246 YY1P25490 414 aa11.78□□□□□ -0.52
MSRA-210ENST00000528246 LMOD1P29536 600 aaPredicted RBP11.78□□□□□ -0.52
MSRA-210ENST00000528246 BAG6P46379 1132 aa11.78□□□□□ -0.52
MSRA-210ENST00000528246 GNL2Q13823 731 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms