RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 KIF4BQ2VIQ3 1234 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 TRMT44Q8IYL2 757 aaKnown RBP16.74■□□□□ 0.27
CAPN1-214ENST00000528165 MLKLQ8NB16 471 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 ZBTB9Q96C00 473 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 GPR108Q9NPR9 543 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.74■□□□□ 0.27
CAPN1-214ENST00000528165 PHF8Q9UPP1 1060 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 CDKL5O76039 1030 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 FGAP02671 866 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 TTC39AQ5SRH9 613 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 ATG9AQ7Z3C6 839 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 CERS3Q8IU89 383 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 CCDC102AQ96A19 550 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 ADGRG1Q9Y653 693 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 FKBP4Q02790 459 aaKnown RBP eCLIP16.74■□□□□ 0.27
CAPN1-214ENST00000528165 POSTNQ15063 836 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 ZNF569Q5MCW4 686 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 GBP3Q9H0R5 595 aa16.74■□□□□ 0.27
CAPN1-214ENST00000528165 MKRN1Q9UHC7 482 aaKnown RBP16.74■□□□□ 0.27
CAPN1-214ENST00000528165 MAGEA9P43362 315 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 PIP4K2AP48426 406 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-214ENST00000528165 TRIM29Q14134 588 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 CPLX2Q6PUV4 134 aaKnown RBP16.73■□□□□ 0.27
CAPN1-214ENST00000528165 ARHGEF25Q86VW2 580 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 PPFIBP1Q86W92 1011 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 KRI1Q8N9T8 703 aaKnown RBP16.73■□□□□ 0.27
CAPN1-214ENST00000528165 NAA15Q9BXJ9 866 aaKnown RBP16.73■□□□□ 0.27
CAPN1-214ENST00000528165 SUGCTQ9HAC7 445 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 ZMYM6O95789 1325 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 CTAGE9A4FU28 777 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 RHOXF2BP0C7M4 288 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 IL15P40933 162 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-214ENST00000528165 METAP2P50579 478 aaKnown RBP eCLIP16.73■□□□□ 0.27
CAPN1-214ENST00000528165 MDM2Q00987 491 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-214ENST00000528165 NR1I3Q14994 352 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 WWC2Q6AWC2 1192 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 ELOA2Q8IYF1 753 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-214ENST00000528165 FAM71BQ8TC56 605 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 RHOXF2Q9BQY4 288 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.73■□□□□ 0.27
CAPN1-214ENST00000528165 ACBD3Q9H3P7 528 aa16.73■□□□□ 0.27
CAPN1-214ENST00000528165 ZNF213O14771 459 aa16.72■□□□□ 0.27
CAPN1-214ENST00000528165 CASP8Q14790 479 aa16.72■□□□□ 0.27
CAPN1-214ENST00000528165 TTC31Q49AM3 519 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-214ENST00000528165 SAMSN1Q9NSI8 373 aaKnown RBP16.72■□□□□ 0.27
CAPN1-214ENST00000528165 GTF2A1P52655 376 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-214ENST00000528165 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
CAPN1-214ENST00000528165 SPECC1Q5M775 1068 aa16.72■□□□□ 0.27
CAPN1-214ENST00000528165 FOXR1Q6PIV2 292 aa16.72■□□□□ 0.27
CAPN1-214ENST00000528165 RAD9BQ6WBX8 426 aa16.72■□□□□ 0.27
CAPN1-214ENST00000528165 FOXP2O15409 715 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 TRDNQ13061 729 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 ICE2Q659A1 982 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 TEX13AQ9BXU3 409 aaPredicted RBP16.71■□□□□ 0.27
CAPN1-214ENST00000528165 WDR19Q8NEZ3 1342 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 CTAGE15A4D2H0 777 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 EIF3CLB5ME19 914 aaKnown RBP16.71■□□□□ 0.27
CAPN1-214ENST00000528165 PHACTR2O75167 634 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 CTAGE8P0CG41 777 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 VSNL1P62760 191 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 CTAGE6Q86UF2 777 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 CTAGE4Q8IX94 777 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 CPLX3Q8WVH0 158 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 PHKBQ93100 1093 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 EIF3CQ99613 913 aaKnown RBP16.71■□□□□ 0.27
CAPN1-214ENST00000528165 CPDO75976 1380 aa16.71■□□□□ 0.27
CAPN1-214ENST00000528165 SIPA1L3O60292 1781 aaPredicted RBP16.71■□□□□ 0.26
CAPN1-214ENST00000528165 A0A1B0GTH6 734 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 TUBBP07437 444 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 ZFYP08048 801 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-214ENST00000528165 KCNA6P17658 529 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 CASP7P55210 303 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 IGSF22Q8N9C0 903 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 ANGEL1Q9UNK9 670 aaKnown RBP16.7■□□□□ 0.26
CAPN1-214ENST00000528165 AKAP2Q9Y2D5 859 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 A0A0U1RQJ8 604 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 RXRAP19793 462 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 RBL2Q08999 1139 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 MORC3Q14149 939 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 TRIML1Q8N9V2 468 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 ATRIPQ8WXE1 791 aa16.7■□□□□ 0.26
CAPN1-214ENST00000528165 AFDNP55196 1824 aaKnown RBP16.7■□□□□ 0.26
CAPN1-214ENST00000528165 PRR29P0C7W0 189 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 PIP4K2BP78356 416 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 FOXO4P98177 505 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 NT5DC1Q5TFE4 455 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 ZNF496Q96IT1 587 aaPredicted RBP16.69■□□□□ 0.26
CAPN1-214ENST00000528165 SLC52A2Q9HAB3 445 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 MED4Q9NPJ6 270 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 POLR2DO15514 142 aaKnown RBP16.69■□□□□ 0.26
CAPN1-214ENST00000528165 RASGRP2Q7LDG7 609 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 LRP10Q7Z4F1 713 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 SLC35F6Q8N357 371 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 SERTAD1Q9UHV2 236 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 C5P01031 1676 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 TEX33O43247 280 aa16.69■□□□□ 0.26
CAPN1-214ENST00000528165 IARSP41252 1262 aaKnown RBP16.69■□□□□ 0.26
CAPN1-214ENST00000528165 SARSP49591 514 aaKnown RBP16.69■□□□□ 0.26
CAPN1-214ENST00000528165 PLCD1P51178 756 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms