RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 ALDH1A1P00352 501 aa18.99■□□□□ 0.63
CAPN1-213ENST00000527897 OTUD7BQ6GQQ9 843 aa18.99■□□□□ 0.63
CAPN1-213ENST00000527897 CLASRPQ8N2M8 674 aaKnown RBP18.99■□□□□ 0.63
CAPN1-213ENST00000527897 KIF1BPQ96EK5 621 aa18.99■□□□□ 0.63
CAPN1-213ENST00000527897 R3HDMLQ9H3Y0 253 aa18.99■□□□□ 0.63
CAPN1-213ENST00000527897 MAST2Q6P0Q8 1798 aa18.98■□□□□ 0.63
CAPN1-213ENST00000527897 CCL15-CCL14A0A0B4J2E2 113 aa18.98■□□□□ 0.63
CAPN1-213ENST00000527897 IDH1O75874 414 aaKnown RBP18.98■□□□□ 0.63
CAPN1-213ENST00000527897 RHBDL3P58872 404 aa18.98■□□□□ 0.63
CAPN1-213ENST00000527897 CCL15Q16663 113 aa18.98■□□□□ 0.63
CAPN1-213ENST00000527897 ERO1BQ86YB8 467 aa18.98■□□□□ 0.63
CAPN1-213ENST00000527897 TEX11Q8IYF3 940 aa18.98■□□□□ 0.63
CAPN1-213ENST00000527897 ZNF296Q8WUU4 475 aaPredicted RBP18.98■□□□□ 0.63
CAPN1-213ENST00000527897 ZNF512BQ96KM6 892 aaPredicted RBP18.98■□□□□ 0.63
CAPN1-213ENST00000527897 PIH1D3Q9NQM4 214 aaKnown RBP18.98■□□□□ 0.63
CAPN1-213ENST00000527897 AATFQ9NY61 560 aaKnown RBP eCLIP18.98■□□□□ 0.63
CAPN1-213ENST00000527897 RFX7Q2KHR2 1363 aa18.97■□□□□ 0.63
CAPN1-213ENST00000527897 LAMB1P07942 1786 aa18.97■□□□□ 0.63
CAPN1-213ENST00000527897 DDTLA6NHG4 134 aaPredicted RBP18.97■□□□□ 0.63
CAPN1-213ENST00000527897 SPDYE5A6NIY4 337 aa18.97■□□□□ 0.63
CAPN1-213ENST00000527897 CCDC85CA6NKD9 419 aa18.97■□□□□ 0.63
CAPN1-213ENST00000527897 GPR25O00155 361 aa18.97■□□□□ 0.63
CAPN1-213ENST00000527897 IFIT2P09913 472 aaKnown RBP18.97■□□□□ 0.63
CAPN1-213ENST00000527897 GTF2A2P52657 109 aa18.97■□□□□ 0.63
CAPN1-213ENST00000527897 SH3BP5LQ7L8J4 393 aa18.97■□□□□ 0.63
CAPN1-213ENST00000527897 SLURP2P0DP57 97 aa18.96■□□□□ 0.63
CAPN1-213ENST00000527897 SH3RF3Q8TEJ3 882 aaPredicted RBP18.96■□□□□ 0.63
CAPN1-213ENST00000527897 BRI3BPQ8WY22 251 aa18.96■□□□□ 0.63
CAPN1-213ENST00000527897 MS4A4AQ96JQ5 239 aa18.96■□□□□ 0.63
CAPN1-213ENST00000527897 PTPN18Q99952 460 aa18.96■□□□□ 0.63
CAPN1-213ENST00000527897 FKTNO75072 461 aa18.95■□□□□ 0.62
CAPN1-213ENST00000527897 RAB11FIP3O75154 756 aa18.95■□□□□ 0.62
CAPN1-213ENST00000527897 BAG3O95817 575 aa18.95■□□□□ 0.62
CAPN1-213ENST00000527897 CTU1Q7Z7A3 348 aaKnown RBP18.95■□□□□ 0.62
CAPN1-213ENST00000527897 TESPA1A2RU30 521 aaPredicted RBP18.94■□□□□ 0.62
CAPN1-213ENST00000527897 IRF6O14896 467 aa18.94■□□□□ 0.62
CAPN1-213ENST00000527897 CYP7A1P22680 504 aa18.94■□□□□ 0.62
CAPN1-213ENST00000527897 CRHR2Q13324 411 aa18.94■□□□□ 0.62
CAPN1-213ENST00000527897 PPIL2Q13356 520 aa18.94■□□□□ 0.62
CAPN1-213ENST00000527897 ADGRA1Q86SQ6 560 aa18.94■□□□□ 0.62
CAPN1-213ENST00000527897 ANTXR1Q9H6X2 564 aa18.94■□□□□ 0.62
CAPN1-213ENST00000527897 ZNF112Q9UJU3 913 aa18.94■□□□□ 0.62
CAPN1-213ENST00000527897 FAM196BA6NMK8 535 aa18.93■□□□□ 0.62
CAPN1-213ENST00000527897 MAP4K4O95819 1239 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-213ENST00000527897 CETPP11597 493 aa18.93■□□□□ 0.62
CAPN1-213ENST00000527897 PLCG2P16885 1265 aa18.93■□□□□ 0.62
CAPN1-213ENST00000527897 PPATQ06203 517 aa18.93■□□□□ 0.62
CAPN1-213ENST00000527897 SNAPC2Q13487 334 aa18.93■□□□□ 0.62
CAPN1-213ENST00000527897 MAGEB6Q8N7X4 407 aa18.93■□□□□ 0.62
CAPN1-213ENST00000527897 DNAJC2Q99543 621 aaKnown RBP18.93■□□□□ 0.62
CAPN1-213ENST00000527897 CFHR5Q9BXR6 569 aa18.93■□□□□ 0.62
CAPN1-213ENST00000527897 OSBPL5Q9H0X9 879 aaPredicted RBP18.93■□□□□ 0.62
CAPN1-213ENST00000527897 ATRNL1Q5VV63 1379 aa18.93■□□□□ 0.62
CAPN1-213ENST00000527897 RRP1P56182 461 aaKnown RBP18.92■□□□□ 0.62
CAPN1-213ENST00000527897 DYNLL1P63167 89 aaKnown RBP18.92■□□□□ 0.62
CAPN1-213ENST00000527897 TAF1CQ15572 869 aaPredicted RBP18.92■□□□□ 0.62
CAPN1-213ENST00000527897 MAPKAPK5Q8IW41 473 aa18.92■□□□□ 0.62
CAPN1-213ENST00000527897 FAM43AQ8N2R8 423 aa18.92■□□□□ 0.62
CAPN1-213ENST00000527897 MIGA1Q8NAN2 632 aa18.92■□□□□ 0.62
CAPN1-213ENST00000527897 TGFBRAP1Q8WUH2 860 aa18.92■□□□□ 0.62
CAPN1-213ENST00000527897 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.92■□□□□ 0.62
CAPN1-213ENST00000527897 PICK1Q9NRD5 415 aa18.92■□□□□ 0.62
CAPN1-213ENST00000527897 PHF20L1A8MW92 1017 aa18.91■□□□□ 0.62
CAPN1-213ENST00000527897 SMARCA5O60264 1052 aaPredicted RBP18.91■□□□□ 0.62
CAPN1-213ENST00000527897 MAP3K12Q12852 859 aa18.91■□□□□ 0.62
CAPN1-213ENST00000527897 NOL9Q5SY16 702 aaKnown RBP18.91■□□□□ 0.62
CAPN1-213ENST00000527897 LRRCC1Q9C099 1032 aa18.91■□□□□ 0.62
CAPN1-213ENST00000527897 BTBD19C9JJ37 291 aa18.9■□□□□ 0.62
CAPN1-213ENST00000527897 GOLIM4O00461 696 aa18.9■□□□□ 0.62
CAPN1-213ENST00000527897 NOM1Q5C9Z4 860 aaKnown RBP18.9■□□□□ 0.62
CAPN1-213ENST00000527897 SCYL3Q8IZE3 742 aa18.9■□□□□ 0.62
CAPN1-213ENST00000527897 CDK5RAP2Q96SN8 1893 aa18.9■□□□□ 0.62
CAPN1-213ENST00000527897 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
CAPN1-213ENST00000527897 PPP4CP60510 307 aa18.89■□□□□ 0.61
CAPN1-213ENST00000527897 TTF1Q15361 905 aaPredicted RBP18.89■□□□□ 0.61
CAPN1-213ENST00000527897 SLC4A8Q2Y0W8 1093 aa18.89■□□□□ 0.61
CAPN1-213ENST00000527897 BOLA2Q9H3K6 86 aa18.89■□□□□ 0.61
CAPN1-213ENST00000527897 ZFYVE28Q9HCC9 887 aa18.89■□□□□ 0.61
CAPN1-213ENST00000527897 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.89■□□□□ 0.61
CAPN1-213ENST00000527897 SAP30BPQ9UHR5 308 aaKnown RBP18.89■□□□□ 0.61
CAPN1-213ENST00000527897 ZHX2Q9Y6X8 837 aa18.89■□□□□ 0.61
CAPN1-213ENST00000527897 DOCK1Q14185 1865 aa18.88■□□□□ 0.61
CAPN1-213ENST00000527897 USP5P45974 858 aa18.88■□□□□ 0.61
CAPN1-213ENST00000527897 CCDC84Q86UT8 332 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-213ENST00000527897 CD99L2Q8TCZ2 262 aa18.88■□□□□ 0.61
CAPN1-213ENST00000527897 EDC3Q96F86 508 aaKnown RBP18.88■□□□□ 0.61
CAPN1-213ENST00000527897 TRIM34Q9BYJ4 488 aa18.88■□□□□ 0.61
CAPN1-213ENST00000527897 FLT1P17948 1338 aa18.88■□□□□ 0.61
CAPN1-213ENST00000527897 CTNND1O60716 968 aaKnown RBP18.87■□□□□ 0.61
CAPN1-213ENST00000527897 IGSF3O75054 1194 aa18.87■□□□□ 0.61
CAPN1-213ENST00000527897 COL2A1P02458 1487 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-213ENST00000527897 PTPRAP18433 802 aa18.87■□□□□ 0.61
CAPN1-213ENST00000527897 MAP3K10Q02779 954 aa18.87■□□□□ 0.61
CAPN1-213ENST00000527897 SLC9C2Q5TAH2 1124 aa18.87■□□□□ 0.61
CAPN1-213ENST00000527897 FOCADQ5VW36 1801 aa18.87■□□□□ 0.61
CAPN1-213ENST00000527897 TRIM17Q9Y577 477 aa18.87■□□□□ 0.61
CAPN1-213ENST00000527897 TBC1D12O60347 775 aa18.86■□□□□ 0.61
CAPN1-213ENST00000527897 SP3Q02447 781 aa18.86■□□□□ 0.61
CAPN1-213ENST00000527897 PKN2Q16513 984 aaKnown RBP18.86■□□□□ 0.61
CAPN1-213ENST00000527897 CRACR2BQ8N4Y2 399 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms