RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 HTTP42858 3142 aa23.63■■□□□ 1.37
CAPN1-211ENST00000527739 PRPF38BQ5VTL8 546 aaKnown RBP23.62■■□□□ 1.37
CAPN1-211ENST00000527739 OTOP1Q7RTM1 612 aa23.62■■□□□ 1.37
CAPN1-211ENST00000527739 ZNF384Q8TF68 577 aa23.62■■□□□ 1.37
CAPN1-211ENST00000527739 NOL10Q9BSC4 688 aaKnown RBP23.62■■□□□ 1.37
CAPN1-211ENST00000527739 DDX4Q9NQI0 724 aaKnown RBP23.62■■□□□ 1.37
CAPN1-211ENST00000527739 DDX19BQ9UMR2 479 aa23.62■■□□□ 1.37
CAPN1-211ENST00000527739 APBB1O00213 710 aa23.61■■□□□ 1.37
CAPN1-211ENST00000527739 IRF6O14896 467 aa23.61■■□□□ 1.37
CAPN1-211ENST00000527739 WDHD1O75717 1129 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-211ENST00000527739 CETPP11597 493 aa23.61■■□□□ 1.37
CAPN1-211ENST00000527739 CAP1Q01518 475 aa23.61■■□□□ 1.37
CAPN1-211ENST00000527739 SNAPC2Q13487 334 aa23.61■■□□□ 1.37
CAPN1-211ENST00000527739 TAF1CQ15572 869 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-211ENST00000527739 ERC1Q8IUD2 1116 aa23.61■■□□□ 1.37
CAPN1-211ENST00000527739 EAF2Q96CJ1 260 aaPredicted RBP23.61■■□□□ 1.37
CAPN1-211ENST00000527739 TLR7Q9NYK1 1049 aaKnown RBP23.61■■□□□ 1.37
CAPN1-211ENST00000527739 PPIL2Q13356 520 aa23.6■■□□□ 1.37
CAPN1-211ENST00000527739 CD99L2Q8TCZ2 262 aa23.6■■□□□ 1.37
CAPN1-211ENST00000527739 ZNF112Q9UJU3 913 aa23.6■■□□□ 1.37
CAPN1-211ENST00000527739 DBNLQ9UJU6 430 aaKnown RBP23.6■■□□□ 1.37
CAPN1-211ENST00000527739 DDTLA6NHG4 134 aaPredicted RBP23.59■■□□□ 1.37
CAPN1-211ENST00000527739 ZAP70P43403 619 aa23.59■■□□□ 1.37
CAPN1-211ENST00000527739 RHBDL3P58872 404 aa23.59■■□□□ 1.37
CAPN1-211ENST00000527739 PPATQ06203 517 aa23.59■■□□□ 1.37
CAPN1-211ENST00000527739 HSP90AB4PQ58FF6 505 aa23.59■■□□□ 1.37
CAPN1-211ENST00000527739 NAA16Q6N069 864 aaPredicted RBP23.59■■□□□ 1.37
CAPN1-211ENST00000527739 SH3BP5LQ7L8J4 393 aa23.59■■□□□ 1.37
CAPN1-211ENST00000527739 AACSQ86V21 672 aa23.59■■□□□ 1.37
CAPN1-211ENST00000527739 FAM43AQ8N2R8 423 aa23.59■■□□□ 1.37
CAPN1-211ENST00000527739 ZFYVE28Q9HCC9 887 aa23.59■■□□□ 1.37
CAPN1-211ENST00000527739 CYP2E1P05181 493 aaPredicted RBP23.58■■□□□ 1.37
CAPN1-211ENST00000527739 RPAP2Q8IXW5 612 aaPredicted RBP23.58■■□□□ 1.37
CAPN1-211ENST00000527739 TEX11Q8IYF3 940 aa23.58■■□□□ 1.37
CAPN1-211ENST00000527739 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.58■■□□□ 1.37
CAPN1-211ENST00000527739 CHMP4BQ9H444 224 aaKnown RBP23.58■■□□□ 1.37
CAPN1-211ENST00000527739 IL1RAPL2Q9NP60 686 aa23.58■■□□□ 1.37
CAPN1-211ENST00000527739 POTEFA5A3E0 1075 aa23.57■■□□□ 1.36
CAPN1-211ENST00000527739 HMMRO75330 724 aa23.57■■□□□ 1.36
CAPN1-211ENST00000527739 ERO1AQ96HE7 468 aa23.57■■□□□ 1.36
CAPN1-211ENST00000527739 ZNF512BQ96KM6 892 aaPredicted RBP23.57■■□□□ 1.36
CAPN1-211ENST00000527739 PICK1Q9NRD5 415 aa23.57■■□□□ 1.36
CAPN1-211ENST00000527739 BTBD19C9JJ37 291 aa23.56■■□□□ 1.36
CAPN1-211ENST00000527739 BAG3O95817 575 aa23.56■■□□□ 1.36
CAPN1-211ENST00000527739 SLURP2P0DP57 97 aa23.56■■□□□ 1.36
CAPN1-211ENST00000527739 SP3Q02447 781 aa23.56■■□□□ 1.36
CAPN1-211ENST00000527739 RHPN1Q8TCX5 695 aa23.56■■□□□ 1.36
CAPN1-211ENST00000527739 SH3RF3Q8TEJ3 882 aaPredicted RBP23.56■■□□□ 1.36
CAPN1-211ENST00000527739 PIH1D3Q9NQM4 214 aaKnown RBP23.56■■□□□ 1.36
CAPN1-211ENST00000527739 ZBTB40Q9NUA8 1239 aa23.56■■□□□ 1.36
CAPN1-211ENST00000527739 AATFQ9NY61 560 aaKnown RBP eCLIP23.56■■□□□ 1.366e-6■■■■■ 54.7
CAPN1-211ENST00000527739 PTPN22Q9Y2R2 807 aa23.56■■□□□ 1.36
CAPN1-211ENST00000527739 MAP4K4O95819 1239 aaPredicted RBP23.55■■□□□ 1.36
CAPN1-211ENST00000527739 NOL9Q5SY16 702 aaKnown RBP23.55■■□□□ 1.36
CAPN1-211ENST00000527739 MYH2Q9UKX2 1941 aa23.55■■□□□ 1.36
CAPN1-211ENST00000527739 CENPFP49454 3210 aa23.54■■□□□ 1.36
CAPN1-211ENST00000527739 PHF20L1A8MW92 1017 aa23.54■■□□□ 1.36
CAPN1-211ENST00000527739 IDH1O75874 414 aaKnown RBP23.54■■□□□ 1.36
CAPN1-211ENST00000527739 C20orf194Q5TEA3 1177 aa23.54■■□□□ 1.36
CAPN1-211ENST00000527739 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.54■■□□□ 1.36
CAPN1-211ENST00000527739 NDUFB9Q9Y6M9 179 aa23.54■■□□□ 1.36
CAPN1-211ENST00000527739 RFX7Q2KHR2 1363 aa23.53■■□□□ 1.36
CAPN1-211ENST00000527739 AK9Q5TCS8 1911 aa23.53■■□□□ 1.36
CAPN1-211ENST00000527739 SCYL3Q8IZE3 742 aa23.53■■□□□ 1.36
CAPN1-211ENST00000527739 CLASRPQ8N2M8 674 aaKnown RBP23.53■■□□□ 1.36
CAPN1-211ENST00000527739 ZHX2Q9Y6X8 837 aa23.53■■□□□ 1.36
CAPN1-211ENST00000527739 FAM196BA6NMK8 535 aa23.52■■□□□ 1.36
CAPN1-211ENST00000527739 PLCG2P16885 1265 aa23.52■■□□□ 1.36
CAPN1-211ENST00000527739 CYP7A1P22680 504 aa23.52■■□□□ 1.36
CAPN1-211ENST00000527739 SIRT2Q8IXJ6 389 aa23.52■■□□□ 1.36
CAPN1-211ENST00000527739 OSBPL5Q9H0X9 879 aaPredicted RBP23.52■■□□□ 1.36
CAPN1-211ENST00000527739 EFCC1Q9HA90 598 aa23.52■■□□□ 1.36
CAPN1-211ENST00000527739 MKI67P46013 3256 aaKnown RBP23.51■■□□□ 1.35
CAPN1-211ENST00000527739 NPM3O75607 178 aaKnown RBP23.51■■□□□ 1.35
CAPN1-211ENST00000527739 IFIT2P09913 472 aaKnown RBP23.51■■□□□ 1.35
CAPN1-211ENST00000527739 MAPKAPK5Q8IW41 473 aa23.51■■□□□ 1.35
CAPN1-211ENST00000527739 TGFBRAP1Q8WUH2 860 aa23.51■■□□□ 1.35
CAPN1-211ENST00000527739 KIF1BPQ96EK5 621 aa23.51■■□□□ 1.35
CAPN1-211ENST00000527739 KCNH4Q9UQ05 1017 aa23.51■■□□□ 1.35
CAPN1-211ENST00000527739 ATRNL1Q5VV63 1379 aa23.51■■□□□ 1.35
CAPN1-211ENST00000527739 BRCA2P51587 3418 aa23.5■■□□□ 1.35
CAPN1-211ENST00000527739 CTNND1O60716 968 aaKnown RBP23.5■■□□□ 1.35
CAPN1-211ENST00000527739 PTPRAP18433 802 aa23.5■■□□□ 1.35
CAPN1-211ENST00000527739 MAP3K10Q02779 954 aa23.5■■□□□ 1.35
CAPN1-211ENST00000527739 PDE3AQ14432 1141 aa23.5■■□□□ 1.35
CAPN1-211ENST00000527739 ADGRA1Q86SQ6 560 aa23.5■■□□□ 1.35
CAPN1-211ENST00000527739 PDHXO00330 501 aa23.49■■□□□ 1.35
CAPN1-211ENST00000527739 CXCL11O14625 94 aa23.49■■□□□ 1.35
CAPN1-211ENST00000527739 TLR2O60603 784 aa23.49■■□□□ 1.35
CAPN1-211ENST00000527739 ECM2O94769 699 aaPredicted RBP23.49■■□□□ 1.35
CAPN1-211ENST00000527739 ARHGEF6Q15052 776 aa23.49■■□□□ 1.35
CAPN1-211ENST00000527739 ANKRD23Q86SG2 305 aa23.49■■□□□ 1.35
CAPN1-211ENST00000527739 ANTXR1Q9H6X2 564 aa23.49■■□□□ 1.35
CAPN1-211ENST00000527739 ZCCHC17Q9NP64 241 aaKnown RBP23.49■■□□□ 1.35
CAPN1-211ENST00000527739 TBC1D12O60347 775 aa23.48■■□□□ 1.35
CAPN1-211ENST00000527739 RAB11FIP3O75154 756 aa23.48■■□□□ 1.35
CAPN1-211ENST00000527739 PPP4CP60510 307 aa23.48■■□□□ 1.35
CAPN1-211ENST00000527739 DYNLL1P63167 89 aaKnown RBP23.48■■□□□ 1.35
CAPN1-211ENST00000527739 GADL1Q6ZQY3 521 aa23.48■■□□□ 1.35
CAPN1-211ENST00000527739 MAGEB6Q8N7X4 407 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms