RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PPP4CP60510 307 aa32.13■■■□□ 2.73
TSPAN4-217ENST00000527644 SH3BP5LQ7L8J4 393 aa32.13■■■□□ 2.73
TSPAN4-217ENST00000527644 ZKSCAN4Q969J2 545 aaPredicted RBP32.13■■■□□ 2.73
TSPAN4-217ENST00000527644 BCL11AQ9H165 835 aa32.13■■■□□ 2.73
TSPAN4-217ENST00000527644 DCTPP1Q9H773 170 aa32.13■■■□□ 2.73
TSPAN4-217ENST00000527644 SNCAIPQ9Y6H5 919 aa32.13■■■□□ 2.73
TSPAN4-217ENST00000527644 NDUFB9Q9Y6M9 179 aa32.13■■■□□ 2.73
TSPAN4-217ENST00000527644 IDH1O75874 414 aaKnown RBP32.12■■■□□ 2.73
TSPAN4-217ENST00000527644 ALDH1A1P00352 501 aa32.12■■■□□ 2.73
TSPAN4-217ENST00000527644 PLCG2P16885 1265 aa32.12■■■□□ 2.73
TSPAN4-217ENST00000527644 TMED8Q6PL24 325 aaPredicted RBP32.12■■■□□ 2.73
TSPAN4-217ENST00000527644 TEX11Q8IYF3 940 aa32.12■■■□□ 2.73
TSPAN4-217ENST00000527644 ANTXR1Q9H6X2 564 aa32.12■■■□□ 2.73
TSPAN4-217ENST00000527644 DDTLA6NHG4 134 aaPredicted RBP32.11■■■□□ 2.73
TSPAN4-217ENST00000527644 SPDYE5A6NIY4 337 aa32.11■■■□□ 2.73
TSPAN4-217ENST00000527644 TTF1Q15361 905 aaPredicted RBP32.11■■■□□ 2.73
TSPAN4-217ENST00000527644 ERO1BQ86YB8 467 aa32.11■■■□□ 2.73
TSPAN4-217ENST00000527644 IFNL1Q8IU54 200 aa32.11■■■□□ 2.73
TSPAN4-217ENST00000527644 CNKSR2Q8WXI2 1034 aa32.11■■■□□ 2.73
TSPAN4-217ENST00000527644 AATFQ9NY61 560 aaKnown RBP eCLIP32.11■■■□□ 2.73
TSPAN4-217ENST00000527644 LAMB1P07942 1786 aa32.11■■■□□ 2.73
TSPAN4-217ENST00000527644 MYO5AQ9Y4I1 1855 aaKnown RBP32.1■■■□□ 2.73
TSPAN4-217ENST00000527644 ATRNL1Q5VV63 1379 aa32.1■■■□□ 2.73
TSPAN4-217ENST00000527644 MAP3K12Q12852 859 aa32.1■■■□□ 2.73
TSPAN4-217ENST00000527644 ADGRA1Q86SQ6 560 aa32.1■■■□□ 2.73
TSPAN4-217ENST00000527644 SH3RF3Q8TEJ3 882 aaPredicted RBP32.1■■■□□ 2.73
TSPAN4-217ENST00000527644 PCDHB15Q9Y5E8 787 aa32.1■■■□□ 2.73
TSPAN4-217ENST00000527644 CASP8AP2Q9UKL3 1982 aa32.1■■■□□ 2.73
TSPAN4-217ENST00000527644 TESPA1A2RU30 521 aaPredicted RBP32.09■■■□□ 2.73
TSPAN4-217ENST00000527644 TBC1D8O95759 1140 aa32.09■■■□□ 2.73
TSPAN4-217ENST00000527644 CYP7A1P22680 504 aa32.09■■■□□ 2.73
TSPAN4-217ENST00000527644 INPP5BP32019 993 aa32.09■■■□□ 2.73
TSPAN4-217ENST00000527644 MAP3K10Q02779 954 aa32.09■■■□□ 2.73
TSPAN4-217ENST00000527644 OTUD5Q96G74 571 aa32.09■■■□□ 2.73
TSPAN4-217ENST00000527644 CFHR5Q9BXR6 569 aa32.09■■■□□ 2.73
TSPAN4-217ENST00000527644 GTF2A2P52657 109 aa32.08■■■□□ 2.73
TSPAN4-217ENST00000527644 OTUD7BQ6GQQ9 843 aa32.08■■■□□ 2.73
TSPAN4-217ENST00000527644 MS4A4AQ96JQ5 239 aa32.08■■■□□ 2.73
TSPAN4-217ENST00000527644 CRBNQ96SW2 442 aa32.08■■■□□ 2.73
TSPAN4-217ENST00000527644 OSBPL5Q9H0X9 879 aaPredicted RBP32.08■■■□□ 2.73
TSPAN4-217ENST00000527644 MAGEB6Q8N7X4 407 aa32.07■■■□□ 2.72
TSPAN4-217ENST00000527644 DOCK2Q92608 1830 aa32.07■■■□□ 2.72
TSPAN4-217ENST00000527644 COL2A1P02458 1487 aaPredicted RBP32.06■■■□□ 2.72
TSPAN4-217ENST00000527644 IGF2BP3O00425 579 aaKnown RBP eCLIP32.06■■■□□ 2.72
TSPAN4-217ENST00000527644 SMARCA5O60264 1052 aaPredicted RBP32.06■■■□□ 2.72
TSPAN4-217ENST00000527644 ATP5JP18859 108 aa32.06■■■□□ 2.72
TSPAN4-217ENST00000527644 NOL9Q5SY16 702 aaKnown RBP32.06■■■□□ 2.72
TSPAN4-217ENST00000527644 PHF20L1A8MW92 1017 aa32.05■■■□□ 2.72
TSPAN4-217ENST00000527644 PPATQ06203 517 aa32.05■■■□□ 2.72
TSPAN4-217ENST00000527644 PPIL2Q13356 520 aa32.05■■■□□ 2.72
TSPAN4-217ENST00000527644 NOM1Q5C9Z4 860 aaKnown RBP32.05■■■□□ 2.72
TSPAN4-217ENST00000527644 CERS3Q8IU89 383 aa32.05■■■□□ 2.72
TSPAN4-217ENST00000527644 DNAJC2Q99543 621 aaKnown RBP32.05■■■□□ 2.72
TSPAN4-217ENST00000527644 TBC1D12O60347 775 aa32.04■■■□□ 2.72
TSPAN4-217ENST00000527644 PTPN18Q99952 460 aa32.04■■■□□ 2.72
TSPAN4-217ENST00000527644 GOLIM4O00461 696 aa32.03■■■□□ 2.72
TSPAN4-217ENST00000527644 CCL15-CCL14A0A0B4J2E2 113 aa32.02■■■□□ 2.72
TSPAN4-217ENST00000527644 IRF6O14896 467 aa32.02■■■□□ 2.72
TSPAN4-217ENST00000527644 CCL15Q16663 113 aa32.02■■■□□ 2.72
TSPAN4-217ENST00000527644 TGFBRAP1Q8WUH2 860 aa32.02■■■□□ 2.72
TSPAN4-217ENST00000527644 BRI3BPQ8WY22 251 aa32.02■■■□□ 2.72
TSPAN4-217ENST00000527644 DHX36Q9H2U1 1008 aaKnown RBP32.02■■■□□ 2.72
TSPAN4-217ENST00000527644 BOLA2Q9H3K6 86 aa32.02■■■□□ 2.72
TSPAN4-217ENST00000527644 GPR25O00155 361 aa32.01■■■□□ 2.71
TSPAN4-217ENST00000527644 DYNLL1P63167 89 aaKnown RBP32.01■■■□□ 2.71
TSPAN4-217ENST00000527644 SNAPC2Q13487 334 aa32.01■■■□□ 2.71
TSPAN4-217ENST00000527644 CETPP11597 493 aa32■■■□□ 2.71
TSPAN4-217ENST00000527644 SLC9C2Q5TAH2 1124 aa32■■■□□ 2.71
TSPAN4-217ENST00000527644 MAPKAPK5Q8IW41 473 aa32■■■□□ 2.71
TSPAN4-217ENST00000527644 SCYL3Q8IZE3 742 aa32■■■□□ 2.71
TSPAN4-217ENST00000527644 MIGA1Q8NAN2 632 aa32■■■□□ 2.71
TSPAN4-217ENST00000527644 HAUS7Q99871 368 aa32■■■□□ 2.71
TSPAN4-217ENST00000527644 PAG1Q9NWQ8 432 aa32■■■□□ 2.71
TSPAN4-217ENST00000527644 FLT1P17948 1338 aa32■■■□□ 2.71
TSPAN4-217ENST00000527644 CTNND1O60716 968 aaKnown RBP31.99■■■□□ 2.71
TSPAN4-217ENST00000527644 AAMPQ13685 434 aa31.99■■■□□ 2.71
TSPAN4-217ENST00000527644 ZNF296Q8WUU4 475 aaPredicted RBP31.99■■■□□ 2.71
TSPAN4-217ENST00000527644 R3HDMLQ9H3Y0 253 aa31.99■■■□□ 2.71
TSPAN4-217ENST00000527644 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.99■■■□□ 2.712e-8■■■■■ 42.5
TSPAN4-217ENST00000527644 PI4KBQ9UBF8 816 aa31.99■■■□□ 2.71
TSPAN4-217ENST00000527644 SLURP2P0DP57 97 aa31.98■■■□□ 2.71
TSPAN4-217ENST00000527644 PDE6AP16499 860 aa31.98■■■□□ 2.71
TSPAN4-217ENST00000527644 PICK1Q9NRD5 415 aa31.98■■■□□ 2.71
TSPAN4-217ENST00000527644 ECHDC1Q9NTX5 307 aa31.98■■■□□ 2.71
TSPAN4-217ENST00000527644 EDC3Q96F86 508 aaKnown RBP31.97■■■□□ 2.71
TSPAN4-217ENST00000527644 HERC5Q9UII4 1024 aaKnown RBP31.97■■■□□ 2.71
TSPAN4-217ENST00000527644 KCNH4Q9UQ05 1017 aa31.97■■■□□ 2.71
TSPAN4-217ENST00000527644 DGKZQ13574 1117 aa31.96■■■□□ 2.71
TSPAN4-217ENST00000527644 GPATCH3Q96I76 525 aa31.95■■■□□ 2.71
TSPAN4-217ENST00000527644 MCOLN1Q9GZU1 580 aa31.95■■■□□ 2.71
TSPAN4-217ENST00000527644 FOCADQ5VW36 1801 aa31.95■■■□□ 2.7
TSPAN4-217ENST00000527644 CDK5RAP2Q96SN8 1893 aa31.95■■■□□ 2.7
TSPAN4-217ENST00000527644 MAGEB6P1A0A0J9YX57 407 aa31.94■■■□□ 2.7
TSPAN4-217ENST00000527644 FKTNO75072 461 aa31.94■■■□□ 2.7
TSPAN4-217ENST00000527644 PTPRAP18433 802 aa31.94■■■□□ 2.7
TSPAN4-217ENST00000527644 CRHR2Q13324 411 aa31.94■■■□□ 2.7
TSPAN4-217ENST00000527644 RIOK1Q9BRS2 568 aaKnown RBP31.94■■■□□ 2.7
TSPAN4-217ENST00000527644 ZNF532Q9HCE3 1301 aa31.94■■■□□ 2.7
TSPAN4-217ENST00000527644 FAM196BA6NMK8 535 aa31.93■■■□□ 2.7
TSPAN4-217ENST00000527644 CXCL11O14625 94 aa31.93■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms