RNA–Protein interactions for RNA: ENST00000527413.1

SSSCA1-204, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2

Gene SSSCA1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-204ENST00000527413 GSTO1P78417 241 aa16.72■□□□□ 0.27
SSSCA1-204ENST00000527413 SNAPC2Q13487 334 aa16.72■□□□□ 0.27
SSSCA1-204ENST00000527413 TAF1CQ15572 869 aaPredicted RBP16.72■□□□□ 0.27
SSSCA1-204ENST00000527413 CCDC158Q5M9N0 1113 aa16.72■□□□□ 0.27
SSSCA1-204ENST00000527413 FBXO46Q6PJ61 603 aaPredicted RBP16.72■□□□□ 0.27
SSSCA1-204ENST00000527413 FAM43AQ8N2R8 423 aa16.72■□□□□ 0.27
SSSCA1-204ENST00000527413 RAI14Q9P0K7 980 aa16.72■□□□□ 0.27
SSSCA1-204ENST00000527413 SIPA1L1O43166 1804 aa16.72■□□□□ 0.27
SSSCA1-204ENST00000527413 HTTP42858 3142 aa16.71■□□□□ 0.27
SSSCA1-204ENST00000527413 LDHCP07864 332 aa16.71■□□□□ 0.27
SSSCA1-204ENST00000527413 CETPP11597 493 aa16.71■□□□□ 0.27
SSSCA1-204ENST00000527413 RHBDL3P58872 404 aa16.71■□□□□ 0.27
SSSCA1-204ENST00000527413 PPATQ06203 517 aa16.71■□□□□ 0.27
SSSCA1-204ENST00000527413 PICALMQ13492 652 aa16.71■□□□□ 0.27
SSSCA1-204ENST00000527413 NOL9Q5SY16 702 aaKnown RBP16.71■□□□□ 0.27
SSSCA1-204ENST00000527413 SH3BP5LQ7L8J4 393 aa16.71■□□□□ 0.27
SSSCA1-204ENST00000527413 ERO1AQ96HE7 468 aa16.71■□□□□ 0.27
SSSCA1-204ENST00000527413 COL2A1P02458 1487 aaPredicted RBP16.71■□□□□ 0.27
SSSCA1-204ENST00000527413 DDTLA6NHG4 134 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 SOX10P56693 466 aa16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 MLLT1Q03111 559 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 ZSCAN29Q8IWY8 852 aaPredicted RBP16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 CD99L2Q8TCZ2 262 aa16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 ZCCHC17Q9NP64 241 aaKnown RBP16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 SNRKQ9NRH2 765 aa16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 TLR7Q9NYK1 1049 aaKnown RBP16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 LRP2BPQ9P2M1 347 aa16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 DBNLQ9UJU6 430 aaKnown RBP16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 TRIM17Q9Y577 477 aa16.7■□□□□ 0.26
SSSCA1-204ENST00000527413 RBBP6Q7Z6E9 1792 aaKnown RBP16.69■□□□□ 0.26
SSSCA1-204ENST00000527413 BTBD19C9JJ37 291 aa16.69■□□□□ 0.26
SSSCA1-204ENST00000527413 MAP4K4O95819 1239 aaPredicted RBP16.69■□□□□ 0.26
SSSCA1-204ENST00000527413 SP3Q02447 781 aa16.69■□□□□ 0.26
SSSCA1-204ENST00000527413 OTOP1Q7RTM1 612 aa16.69■□□□□ 0.26
SSSCA1-204ENST00000527413 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.69■□□□□ 0.26
SSSCA1-204ENST00000527413 ZNF512BQ96KM6 892 aaPredicted RBP16.69■□□□□ 0.26
SSSCA1-204ENST00000527413 ZFYVE28Q9HCC9 887 aa16.69■□□□□ 0.26
SSSCA1-204ENST00000527413 EXOC6BQ9Y2D4 811 aa16.69■□□□□ 0.26
SSSCA1-204ENST00000527413 TNRC18O15417 2968 aaPredicted RBP16.68■□□□□ 0.26
SSSCA1-204ENST00000527413 PHF20L1A8MW92 1017 aa16.68■□□□□ 0.26
SSSCA1-204ENST00000527413 NPM3O75607 178 aaKnown RBP16.68■□□□□ 0.26
SSSCA1-204ENST00000527413 ERC1Q8IUD2 1116 aa16.68■□□□□ 0.26
SSSCA1-204ENST00000527413 EAF2Q96CJ1 260 aaPredicted RBP16.68■□□□□ 0.26
SSSCA1-204ENST00000527413 CCDC8Q9H0W5 538 aaPredicted RBP16.68■□□□□ 0.26
SSSCA1-204ENST00000527413 RCAN3Q9UKA8 241 aa16.68■□□□□ 0.26
SSSCA1-204ENST00000527413 DDX19BQ9UMR2 479 aa16.68■□□□□ 0.26
SSSCA1-204ENST00000527413 KCNH4Q9UQ05 1017 aa16.68■□□□□ 0.26
SSSCA1-204ENST00000527413 MYH1P12882 1939 aa16.67■□□□□ 0.26
SSSCA1-204ENST00000527413 CYP2E1P05181 493 aaPredicted RBP16.67■□□□□ 0.26
SSSCA1-204ENST00000527413 ZAP70P43403 619 aa16.67■□□□□ 0.26
SSSCA1-204ENST00000527413 MAP3K10Q02779 954 aa16.67■□□□□ 0.26
SSSCA1-204ENST00000527413 NAA16Q6N069 864 aaPredicted RBP16.67■□□□□ 0.26
SSSCA1-204ENST00000527413 SCYL3Q8IZE3 742 aa16.67■□□□□ 0.26
SSSCA1-204ENST00000527413 NOL10Q9BSC4 688 aaKnown RBP16.67■□□□□ 0.26
SSSCA1-204ENST00000527413 COG6Q9Y2V7 657 aa16.67■□□□□ 0.26
SSSCA1-204ENST00000527413 MGAMO43451 1857 aa16.66■□□□□ 0.26
SSSCA1-204ENST00000527413 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
SSSCA1-204ENST00000527413 OSBPL5Q9H0X9 879 aaPredicted RBP16.66■□□□□ 0.26
SSSCA1-204ENST00000527413 LOC285556D6RIA3 1793 aa16.66■□□□□ 0.26
SSSCA1-204ENST00000527413 TLR2O60603 784 aa16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 IGSF3O75054 1194 aa16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 CAP1Q01518 475 aa16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 HSP90AB4PQ58FF6 505 aa16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 TEX11Q8IYF3 940 aa16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 SH3RF3Q8TEJ3 882 aaPredicted RBP16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 EFCC1Q9HA90 598 aa16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 PIH1D3Q9NQM4 214 aaKnown RBP16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 PICK1Q9NRD5 415 aa16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 AATFQ9NY61 560 aaKnown RBP eCLIP16.65■□□□□ 0.26
SSSCA1-204ENST00000527413 TBC1D12O60347 775 aa16.64■□□□□ 0.25
SSSCA1-204ENST00000527413 BAG3O95817 575 aa16.64■□□□□ 0.25
SSSCA1-204ENST00000527413 PTPRAP18433 802 aa16.64■□□□□ 0.25
SSSCA1-204ENST00000527413 MOGSQ13724 837 aa16.64■□□□□ 0.25
SSSCA1-204ENST00000527413 ADGRA1Q86SQ6 560 aa16.64■□□□□ 0.25
SSSCA1-204ENST00000527413 AACSQ86V21 672 aa16.64■□□□□ 0.25
SSSCA1-204ENST00000527413 RPAP2Q8IXW5 612 aaPredicted RBP16.64■□□□□ 0.25
SSSCA1-204ENST00000527413 ZBTB40Q9NUA8 1239 aa16.64■□□□□ 0.25
SSSCA1-204ENST00000527413 PTPN22Q9Y2R2 807 aa16.64■□□□□ 0.25
SSSCA1-204ENST00000527413 NAV1Q8NEY1 1877 aa16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 DDX60LQ5H9U9 1706 aaKnown RBP16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 FAM196BA6NMK8 535 aa16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 PDHXO00330 501 aa16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 CXCL11O14625 94 aa16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 CTNND1O60716 968 aaKnown RBP16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 HMMRO75330 724 aa16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 PLCG2P16885 1265 aa16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 RHPN1Q8TCX5 695 aa16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 IL1RAPL2Q9NP60 686 aa16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 ZHX2Q9Y6X8 837 aa16.63■□□□□ 0.25
SSSCA1-204ENST00000527413 MYH7P12883 1935 aa16.62■□□□□ 0.25
SSSCA1-204ENST00000527413 CENPFP49454 3210 aa16.62■□□□□ 0.25
SSSCA1-204ENST00000527413 A0A0G2JLL6 359 aaPredicted RBP16.62■□□□□ 0.25
SSSCA1-204ENST00000527413 PPP4CP60510 307 aa16.62■□□□□ 0.25
SSSCA1-204ENST00000527413 ARHGEF6Q15052 776 aa16.62■□□□□ 0.25
SSSCA1-204ENST00000527413 PRRT2Q7Z6L0 340 aaPredicted RBP16.62■□□□□ 0.25
SSSCA1-204ENST00000527413 CHMP4BQ9H444 224 aaKnown RBP16.62■□□□□ 0.25
SSSCA1-204ENST00000527413 AFG3L2Q9Y4W6 797 aa16.62■□□□□ 0.25
SSSCA1-204ENST00000527413 NDUFB9Q9Y6M9 179 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms