RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 PPP1R9BQ96SB3 815 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 TACC3Q9Y6A5 838 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 MAST2Q6P0Q8 1798 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 PCP11498 1178 aaKnown RBP18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 SGMS1Q86VZ5 419 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 STK11IPQ8N1F8 1099 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 ESR2Q92731 530 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 ZC3H12CQ9C0D7 883 aaKnown RBP18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 LY9Q9HBG7 655 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 GDPD2Q9HCC8 539 aa18.98■□□□□ 0.63
SNRNP35-204ENST00000527158 CCDC88AQ3V6T2 1871 aa18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 H0YIN7 160 aa18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 DNM1Q05193 864 aaKnown RBP18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 CTR9Q6PD62 1173 aa18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 DPP8Q6V1X1 898 aaPredicted RBP18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 FERMT3Q86UX7 667 aa18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 C2CD5Q86YS7 1000 aa18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 GPT2Q8TD30 523 aa18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 COA1Q9GZY4 146 aa18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 DCP1AQ9NPI6 582 aaPredicted RBP18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 LRRC37AA6NMS7 1700 aa18.97■□□□□ 0.63
SNRNP35-204ENST00000527158 CCDC69A6NI79 296 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 USP17L12C9JPN9 530 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 USP17L21D6R901 530 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 BAG6P46379 1132 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 NASPP49321 788 aaPredicted RBP18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 METAP2P50579 478 aaKnown RBP eCLIP18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 SYNE3Q6ZMZ3 975 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 TMTC2Q8N394 836 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 SLC12A7Q9Y666 1083 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 RIMBP2O15034 1052 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 ZBTB43O43298 467 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 SLC3A2P08195 630 aaKnown RBP18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 CAVIN1Q6NZI2 390 aaKnown RBP18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 CPLX2Q6PUV4 134 aaKnown RBP18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 APOA5Q6Q788 366 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 CERS3Q8IU89 383 aa18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 ZSCAN16Q9H4T2 348 aaPredicted RBP18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 ARPP21Q9UBL0 812 aaPredicted RBP18.96■□□□□ 0.63
SNRNP35-204ENST00000527158 KRT85P78386 507 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 MFSD14BQ5SR56 506 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 STYK1Q6J9G0 422 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 RAB11FIP4Q86YS3 637 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 SLF2Q8IX21 1173 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 UBAC1Q9BSL1 405 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 DUOX1Q9NRD9 1551 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 FIBPO43427 364 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 CDKL5O76039 1030 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 PPP4CP60510 307 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 WTAPQ15007 396 aa18.95■□□□□ 0.62
SNRNP35-204ENST00000527158 CHD4Q14839 1912 aa18.94■□□□□ 0.62
SNRNP35-204ENST00000527158 MROH7-TTC4A0A0A0MT08 1334 aa18.94■□□□□ 0.62
SNRNP35-204ENST00000527158 CYP2D7A0A087X1C5 515 aa18.94■□□□□ 0.62
SNRNP35-204ENST00000527158 USP5P45974 858 aa18.94■□□□□ 0.62
SNRNP35-204ENST00000527158 DIXDC1Q155Q3 683 aa18.94■□□□□ 0.62
SNRNP35-204ENST00000527158 GRIK5Q16478 980 aa18.94■□□□□ 0.62
SNRNP35-204ENST00000527158 SBK1Q52WX2 424 aa18.94■□□□□ 0.62
SNRNP35-204ENST00000527158 FAM205AQ6ZU69 1335 aa18.94■□□□□ 0.62
SNRNP35-204ENST00000527158 LTBP1Q14766 1721 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 HS1BP3Q53T59 392 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 MICU3Q86XE3 530 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 EYA3Q99504 573 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 ZKSCAN3Q9BRR0 538 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 SENP2Q9HC62 589 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 ORC3Q9UBD5 711 aaPredicted RBP18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 G3V3G9 751 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 PPFIA3O75145 1194 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 FGRP09769 529 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 FDPSP14324 419 aaKnown RBP18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 DCAF8Q5TAQ9 597 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 MCM9Q9NXL9 1143 aa18.93■□□□□ 0.62
SNRNP35-204ENST00000527158 GOLGA8AA7E2F4 631 aa18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 UBE2HP62256 183 aa18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 GTF2IP78347 998 aa18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 OLFM4Q6UX06 510 aa18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 SH3RF3Q8TEJ3 882 aaPredicted RBP18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 RANBP6O60518 1105 aaKnown RBP18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 GADD45BO75293 160 aaPredicted RBP18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 ADD1P35611 737 aaKnown RBP18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 RESTQ13127 1097 aa18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 AMOTL1Q8IY63 956 aa18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 CNKSR1Q969H4 720 aa18.92■□□□□ 0.62
SNRNP35-204ENST00000527158 KIAA1551Q9HCM1 1747 aa18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 PLCG2P16885 1265 aa18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 FOSBP53539 338 aa18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 PDE4BQ07343 736 aa18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 IQCA1Q86XH1 822 aa18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 SYAP1Q96A49 352 aaPredicted RBP18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 RTFDC1Q9BY42 306 aaPredicted RBP18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 SCAND2PQ9GZW5 306 aaPredicted RBP18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 SMIM22K7EJ46 135 aa18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 RXRAP19793 462 aa18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 ZSCAN23Q3MJ62 389 aa18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 FAM163AQ96GL9 167 aaPredicted RBP18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 C8orf76Q96K31 380 aa18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 SUGT1Q9Y2Z0 365 aa18.91■□□□□ 0.62
SNRNP35-204ENST00000527158 COL11A2P13942 1736 aaPredicted RBP18.9■□□□□ 0.62
SNRNP35-204ENST00000527158 GPR75-ASB3A0A0A6YYF3 556 aa18.9■□□□□ 0.62
SNRNP35-204ENST00000527158 ORC4O43929 436 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms