RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 SAMM50Q9Y512 469 aa9.84□□□□□ -0.83
COPB1-204ENST00000526191 AK5Q9Y6K8 562 aa9.84□□□□□ -0.83
COPB1-204ENST00000526191 RNGTTO60942 597 aaKnown RBP9.83□□□□□ -0.84
COPB1-204ENST00000526191 ADAMTS4O75173 837 aa9.83□□□□□ -0.84
COPB1-204ENST00000526191 PCNX4Q63HM2 1172 aa9.83□□□□□ -0.84
COPB1-204ENST00000526191 LLGL2Q6P1M3 1020 aa9.83□□□□□ -0.84
COPB1-204ENST00000526191 ZNF765Q7L2R6 523 aa9.83□□□□□ -0.84
COPB1-204ENST00000526191 SMYD4Q8IYR2 804 aaPredicted RBP9.83□□□□□ -0.84
COPB1-204ENST00000526191 PARP2Q9UGN5 583 aa9.83□□□□□ -0.84
COPB1-204ENST00000526191 CSADQ9Y600 493 aa9.83□□□□□ -0.84
COPB1-204ENST00000526191 FOSL1P15407 271 aa9.82□□□□□ -0.84
COPB1-204ENST00000526191 CDK5R2Q13319 367 aa9.82□□□□□ -0.84
COPB1-204ENST00000526191 DTX1Q86Y01 620 aa9.82□□□□□ -0.84
COPB1-204ENST00000526191 METTL22Q9BUU2 404 aaPredicted RBP9.82□□□□□ -0.84
COPB1-204ENST00000526191 DCDC2CA8MYV0 355 aa9.81□□□□□ -0.84
COPB1-204ENST00000526191 TRIM37O94972 964 aa9.81□□□□□ -0.84
COPB1-204ENST00000526191 CPSF6Q16630 551 aaKnown RBP eCLIP9.81□□□□□ -0.84
COPB1-204ENST00000526191 SV2BQ7L1I2 683 aa9.81□□□□□ -0.84
COPB1-204ENST00000526191 ISL2Q96A47 359 aa9.81□□□□□ -0.84
COPB1-204ENST00000526191 CYP26A1O43174 497 aa9.8□□□□□ -0.84
COPB1-204ENST00000526191 ERVK-24P63145 666 aa9.8□□□□□ -0.84
COPB1-204ENST00000526191 FGD1P98174 961 aa9.8□□□□□ -0.84
COPB1-204ENST00000526191 TAGLNQ01995 201 aaKnown RBP9.8□□□□□ -0.84
COPB1-204ENST00000526191 LRRC14Q15048 493 aa9.8□□□□□ -0.84
COPB1-204ENST00000526191 MSMPQ1L6U9 139 aa9.8□□□□□ -0.84
COPB1-204ENST00000526191 CCDC27Q2M243 656 aa9.8□□□□□ -0.84
COPB1-204ENST00000526191 PPM1JQ5JR12 505 aa9.8□□□□□ -0.84
COPB1-204ENST00000526191 FBXO33Q7Z6M2 555 aa9.8□□□□□ -0.84
COPB1-204ENST00000526191 FAM161BQ96MY7 647 aa9.8□□□□□ -0.84
COPB1-204ENST00000526191 PTPN11Q06124 597 aaPredicted RBP9.79□□□□□ -0.84
COPB1-204ENST00000526191 MEI1Q5TIA1 1274 aa9.79□□□□□ -0.84
COPB1-204ENST00000526191 DUSP27Q5VZP5 1158 aa9.79□□□□□ -0.84
COPB1-204ENST00000526191 RNF214Q8ND24 703 aa9.79□□□□□ -0.84
COPB1-204ENST00000526191 PCDHA4Q9UN74 947 aa9.79□□□□□ -0.84
COPB1-204ENST00000526191 CYP8B1Q9UNU6 501 aa9.79□□□□□ -0.84
COPB1-204ENST00000526191 DAB2P98082 770 aa9.78□□□□□ -0.84
COPB1-204ENST00000526191 PSMD2Q13200 908 aa9.78□□□□□ -0.84
COPB1-204ENST00000526191 OGFOD3Q6PK18 319 aa9.78□□□□□ -0.84
COPB1-204ENST00000526191 C12orf40Q86WS4 652 aa9.78□□□□□ -0.84
COPB1-204ENST00000526191 LRRC4CQ9HCJ2 640 aa9.78□□□□□ -0.84
COPB1-204ENST00000526191 PCOLCE2Q9UKZ9 415 aa9.78□□□□□ -0.84
COPB1-204ENST00000526191 FAM87AP0C7U9 286 aa9.77□□□□□ -0.85
COPB1-204ENST00000526191 NTF4P34130 210 aa9.77□□□□□ -0.85
COPB1-204ENST00000526191 CYP27A1Q02318 531 aa9.77□□□□□ -0.85
COPB1-204ENST00000526191 CCDC85BQ15834 202 aaPredicted RBP9.77□□□□□ -0.85
COPB1-204ENST00000526191 TTBK2Q6IQ55 1244 aa9.77□□□□□ -0.85
COPB1-204ENST00000526191 UBE3DQ7Z6J8 389 aa9.77□□□□□ -0.85
COPB1-204ENST00000526191 GAL3ST3Q96A11 431 aa9.77□□□□□ -0.85
COPB1-204ENST00000526191 SSU72Q9NP77 194 aaKnown RBP9.77□□□□□ -0.85
COPB1-204ENST00000526191 XPCQ01831 940 aaPredicted RBP9.76□□□□□ -0.85
COPB1-204ENST00000526191 MAP3K11Q16584 847 aa9.76□□□□□ -0.85
COPB1-204ENST00000526191 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.76□□□□□ -0.85
COPB1-204ENST00000526191 LEFTY1O75610 366 aa9.75□□□□□ -0.85
COPB1-204ENST00000526191 CTSHP09668 335 aa9.75□□□□□ -0.85
COPB1-204ENST00000526191 GP2P55259 537 aaKnown RBP9.75□□□□□ -0.85
COPB1-204ENST00000526191 RING1Q06587 406 aa9.75□□□□□ -0.85
COPB1-204ENST00000526191 INPP5AQ14642 412 aa9.75□□□□□ -0.85
COPB1-204ENST00000526191 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.75□□□□□ -0.85
COPB1-204ENST00000526191 ZC3H7BQ9UGR2 993 aaKnown RBP9.75□□□□□ -0.85
COPB1-204ENST00000526191 OAS3Q9Y6K5 1087 aaKnown RBP9.75□□□□□ -0.85
COPB1-204ENST00000526191 CDK8P49336 464 aa9.74□□□□□ -0.85
COPB1-204ENST00000526191 LRFN4Q6PJG9 635 aa9.74□□□□□ -0.85
COPB1-204ENST00000526191 TMC4Q7Z404 712 aa9.74□□□□□ -0.85
COPB1-204ENST00000526191 ELMO3Q96BJ8 720 aa9.74□□□□□ -0.85
COPB1-204ENST00000526191 PSMG3-AS1Q96PY0 264 aa9.74□□□□□ -0.85
COPB1-204ENST00000526191 PICK1Q9NRD5 415 aa9.74□□□□□ -0.85
COPB1-204ENST00000526191 PCDHB5Q9Y5E4 795 aa9.74□□□□□ -0.85
COPB1-204ENST00000526191 WNT11O96014 354 aa9.73□□□□□ -0.85
COPB1-204ENST00000526191 ZBTB37Q5TC79 503 aa9.73□□□□□ -0.85
COPB1-204ENST00000526191 SCARA3Q6AZY7 606 aa9.73□□□□□ -0.85
COPB1-204ENST00000526191 U3KQE9 123 aa9.73□□□□□ -0.85
COPB1-204ENST00000526191 LIG3P49916 1009 aa9.72□□□□□ -0.85
COPB1-204ENST00000526191 SEPT6Q14141 434 aa9.72□□□□□ -0.85
COPB1-204ENST00000526191 CYP27C1Q4G0S4 372 aa9.72□□□□□ -0.85
COPB1-204ENST00000526191 NFXL1Q6ZNB6 911 aa9.72□□□□□ -0.85
COPB1-204ENST00000526191 TOP6BLQ8N6T0 577 aa9.72□□□□□ -0.85
COPB1-204ENST00000526191 PLPPR2Q96GM1 343 aa9.72□□□□□ -0.85
COPB1-204ENST00000526191 DUSP23Q9BVJ7 150 aa9.72□□□□□ -0.85
COPB1-204ENST00000526191 CCDC39Q9UFE4 941 aa9.72□□□□□ -0.85
COPB1-204ENST00000526191 NISCHQ9Y2I1 1504 aa9.72□□□□□ -0.85
COPB1-204ENST00000526191 PRAMEF27A3QJZ7 478 aa9.71□□□□□ -0.86
COPB1-204ENST00000526191 FAM181AQ8N9Y4 354 aa9.71□□□□□ -0.86
COPB1-204ENST00000526191 FANCGO15287 622 aa9.7□□□□□ -0.86
COPB1-204ENST00000526191 PRNPP04156 253 aa9.7□□□□□ -0.86
COPB1-204ENST00000526191 RPS26P62854 115 aaKnown RBP9.7□□□□□ -0.86
COPB1-204ENST00000526191 TAF1CQ15572 869 aaPredicted RBP9.7□□□□□ -0.86
COPB1-204ENST00000526191 WIPI1Q5MNZ9 446 aaPredicted RBP9.7□□□□□ -0.86
COPB1-204ENST00000526191 AGMOQ6ZNB7 445 aa9.7□□□□□ -0.86
COPB1-204ENST00000526191 BSDC1Q9NW68 430 aaPredicted RBP9.7□□□□□ -0.86
COPB1-204ENST00000526191 ERCC3P19447 782 aa9.69□□□□□ -0.86
COPB1-204ENST00000526191 VSIG10LQ86VR7 867 aa9.69□□□□□ -0.86
COPB1-204ENST00000526191 ANGEL1Q9UNK9 670 aaKnown RBP9.69□□□□□ -0.86
COPB1-204ENST00000526191 SORBS3O60504 671 aa9.68□□□□□ -0.86
COPB1-204ENST00000526191 TFE3P19532 575 aaPredicted RBP9.68□□□□□ -0.86
COPB1-204ENST00000526191 CYFIP1Q7L576 1253 aa9.68□□□□□ -0.86
COPB1-204ENST00000526191 HDXQ7Z353 690 aa9.68□□□□□ -0.86
COPB1-204ENST00000526191 TLR6Q9Y2C9 796 aa9.68□□□□□ -0.86
COPB1-204ENST00000526191 USP31Q70CQ4 1352 aa9.67□□□□□ -0.86
COPB1-204ENST00000526191 LMNB1P20700 586 aa9.67□□□□□ -0.86
COPB1-204ENST00000526191 ST13P50502 369 aaKnown RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms