RNA–Protein interactions for RNA: ENST00000526080.1

PTPRU-209, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 424 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-209ENST00000526080 PRDX5P30044 214 aa17.34■□□□□ 0.37
PTPRU-209ENST00000526080 FLT3LGP49771 235 aa17.34■□□□□ 0.37
PTPRU-209ENST00000526080 ZFPM1Q8IX07 1006 aa17.34■□□□□ 0.37
PTPRU-209ENST00000526080 SCYL3Q8IZE3 742 aa17.34■□□□□ 0.37
PTPRU-209ENST00000526080 DOCK1Q14185 1865 aa17.33■□□□□ 0.37
PTPRU-209ENST00000526080 EVI5O60447 810 aa17.33■□□□□ 0.36
PTPRU-209ENST00000526080 PTPRAP18433 802 aa17.33■□□□□ 0.36
PTPRU-209ENST00000526080 RFX5P48382 616 aaPredicted RBP17.33■□□□□ 0.36
PTPRU-209ENST00000526080 MAP3K10Q02779 954 aa17.33■□□□□ 0.36
PTPRU-209ENST00000526080 AFG3L2Q9Y4W6 797 aa17.33■□□□□ 0.36
PTPRU-209ENST00000526080 EYSQ5T1H1 3165 aa17.33■□□□□ 0.36
PTPRU-209ENST00000526080 SALL1Q9NSC2 1324 aa17.32■□□□□ 0.36
PTPRU-209ENST00000526080 FASTKD5Q7L8L6 764 aaKnown RBP17.32■□□□□ 0.36
PTPRU-209ENST00000526080 LPIN2Q92539 896 aa17.32■□□□□ 0.36
PTPRU-209ENST00000526080 DEFB118Q96PH6 123 aa17.32■□□□□ 0.36
PTPRU-209ENST00000526080 SALL2Q9Y467 1007 aaPredicted RBP17.32■□□□□ 0.36
PTPRU-209ENST00000526080 ZHX2Q9Y6X8 837 aa17.32■□□□□ 0.36
PTPRU-209ENST00000526080 DNAH12Q6ZR08 3092 aa17.32■□□□□ 0.36
PTPRU-209ENST00000526080 AK9Q5TCS8 1911 aa17.31■□□□□ 0.36
PTPRU-209ENST00000526080 ZBTB22O15209 634 aa17.31■□□□□ 0.36
PTPRU-209ENST00000526080 SH3BP5LQ7L8J4 393 aa17.31■□□□□ 0.36
PTPRU-209ENST00000526080 GDF15Q99988 308 aa17.31■□□□□ 0.36
PTPRU-209ENST00000526080 IDI2Q9BXS1 227 aa17.31■□□□□ 0.36
PTPRU-209ENST00000526080 USP40Q9NVE5 1235 aa17.31■□□□□ 0.36
PTPRU-209ENST00000526080 STAP2Q9UGK3 403 aa17.31■□□□□ 0.36
PTPRU-209ENST00000526080 GAKO14976 1311 aa17.3■□□□□ 0.36
PTPRU-209ENST00000526080 EYA2O00167 538 aa17.3■□□□□ 0.36
PTPRU-209ENST00000526080 TNPO2O14787 897 aaKnown RBP17.3■□□□□ 0.36
PTPRU-209ENST00000526080 SLC5A1P13866 664 aa17.3■□□□□ 0.36
PTPRU-209ENST00000526080 BMP8BP34820 402 aa17.3■□□□□ 0.36
PTPRU-209ENST00000526080 GPR153Q6NV75 609 aa17.3■□□□□ 0.36
PTPRU-209ENST00000526080 ATG9AQ7Z3C6 839 aa17.3■□□□□ 0.36
PTPRU-209ENST00000526080 DIS3LQ8TF46 1054 aaKnown RBP17.3■□□□□ 0.36
PTPRU-209ENST00000526080 LOC285556D6RIA3 1793 aa17.3■□□□□ 0.36
PTPRU-209ENST00000526080 ENTPD3O75355 529 aa17.29■□□□□ 0.36
PTPRU-209ENST00000526080 TFRCP02786 760 aaKnown RBP17.29■□□□□ 0.36
PTPRU-209ENST00000526080 RGS3P49796 1198 aa17.29■□□□□ 0.36
PTPRU-209ENST00000526080 PAWRQ96IZ0 340 aaKnown RBP17.29■□□□□ 0.36
PTPRU-209ENST00000526080 USP44Q9H0E7 712 aa17.29■□□□□ 0.36
PTPRU-209ENST00000526080 LDHBP07195 334 aaKnown RBP17.28■□□□□ 0.36
PTPRU-209ENST00000526080 SLURP2P0DP57 97 aa17.28■□□□□ 0.36
PTPRU-209ENST00000526080 MNX1P50219 401 aaPredicted RBP17.28■□□□□ 0.36
PTPRU-209ENST00000526080 GADL1Q6ZQY3 521 aa17.28■□□□□ 0.36
PTPRU-209ENST00000526080 MRPL50Q8N5N7 158 aaKnown RBP17.28■□□□□ 0.36
PTPRU-209ENST00000526080 PICK1Q9NRD5 415 aa17.28■□□□□ 0.36
PTPRU-209ENST00000526080 AGTPBP1Q9UPW5 1226 aa17.28■□□□□ 0.36
PTPRU-209ENST00000526080 DOCK3Q8IZD9 2030 aa17.27■□□□□ 0.36
PTPRU-209ENST00000526080 ZEB1P37275 1124 aaPredicted RBP17.27■□□□□ 0.36
PTPRU-209ENST00000526080 FAM110CQ1W6H9 321 aa17.27■□□□□ 0.36
PTPRU-209ENST00000526080 NECAB2Q7Z6G3 386 aa17.27■□□□□ 0.36
PTPRU-209ENST00000526080 ANKLE1Q8NAG6 615 aa17.27■□□□□ 0.36
PTPRU-209ENST00000526080 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.27■□□□□ 0.36
PTPRU-209ENST00000526080 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.27■□□□□ 0.36
PTPRU-209ENST00000526080 MYH2Q9UKX2 1941 aa17.27■□□□□ 0.35
PTPRU-209ENST00000526080 DDX60LQ5H9U9 1706 aaKnown RBP17.27■□□□□ 0.35
PTPRU-209ENST00000526080 PTPRCP08575 1304 aa17.26■□□□□ 0.35
PTPRU-209ENST00000526080 DDTLA6NHG4 134 aaPredicted RBP17.26■□□□□ 0.35
PTPRU-209ENST00000526080 CTNND1O60716 968 aaKnown RBP17.26■□□□□ 0.35
PTPRU-209ENST00000526080 TREML2Q5T2D2 321 aa17.26■□□□□ 0.35
PTPRU-209ENST00000526080 SMCR8Q8TEV9 937 aaPredicted RBP17.26■□□□□ 0.35
PTPRU-209ENST00000526080 MRS2Q9HD23 443 aa17.26■□□□□ 0.35
PTPRU-209ENST00000526080 DDX4Q9NQI0 724 aaKnown RBP17.26■□□□□ 0.35
PTPRU-209ENST00000526080 PLXNB2O15031 1838 aa17.26■□□□□ 0.35
PTPRU-209ENST00000526080 SEMA3EO15041 775 aa17.25■□□□□ 0.35
PTPRU-209ENST00000526080 LRIT3Q3SXY7 679 aa17.25■□□□□ 0.35
PTPRU-209ENST00000526080 ANKRD13CQ8N6S4 541 aa17.25■□□□□ 0.35
PTPRU-209ENST00000526080 COA7Q96BR5 231 aa17.25■□□□□ 0.35
PTPRU-209ENST00000526080 DENND2AQ9ULE3 1009 aa17.25■□□□□ 0.35
PTPRU-209ENST00000526080 ZNF521Q96K83 1311 aa17.24■□□□□ 0.35
PTPRU-209ENST00000526080 TRIM75PA6NK02 468 aa17.24■□□□□ 0.35
PTPRU-209ENST00000526080 CIAO1O76071 339 aa17.24■□□□□ 0.35
PTPRU-209ENST00000526080 HMGCRP04035 888 aa17.24■□□□□ 0.35
PTPRU-209ENST00000526080 PHKA1P46020 1223 aa17.24■□□□□ 0.35
PTPRU-209ENST00000526080 ATP2B3Q16720 1220 aa17.24■□□□□ 0.35
PTPRU-209ENST00000526080 CCDC84Q86UT8 332 aaPredicted RBP17.24■□□□□ 0.35
PTPRU-209ENST00000526080 C7orf61Q8IZ16 206 aa17.24■□□□□ 0.35
PTPRU-209ENST00000526080 FAM163AQ96GL9 167 aaPredicted RBP17.24■□□□□ 0.35
PTPRU-209ENST00000526080 FBXO3Q9UK99 471 aa17.24■□□□□ 0.35
PTPRU-209ENST00000526080 LRRFIP2Q9Y608 721 aaKnown RBP17.24■□□□□ 0.35
PTPRU-209ENST00000526080 CDH23Q9H251 3354 aa17.23■□□□□ 0.35
PTPRU-209ENST00000526080 PDS5AQ29RF7 1337 aaKnown RBP17.23■□□□□ 0.35
PTPRU-209ENST00000526080 PROCA1Q8NCQ7 364 aaPredicted RBP17.23■□□□□ 0.35
PTPRU-209ENST00000526080 GNL3LQ9NVN8 582 aaKnown RBP17.23■□□□□ 0.35
PTPRU-209ENST00000526080 GJD2Q9UKL4 321 aa17.23■□□□□ 0.35
PTPRU-209ENST00000526080 PNMA3Q9UL41 463 aa17.23■□□□□ 0.35
PTPRU-209ENST00000526080 TBC1D12O60347 775 aa17.22■□□□□ 0.35
PTPRU-209ENST00000526080 Q7L0L9 218 aa17.22■□□□□ 0.35
PTPRU-209ENST00000526080 DEFB123Q8N688 67 aa17.22■□□□□ 0.35
PTPRU-209ENST00000526080 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
PTPRU-209ENST00000526080 ZMYND8Q9ULU4 1186 aaPredicted RBP17.22■□□□□ 0.35
PTPRU-209ENST00000526080 STXBP5LQ9Y2K9 1186 aa17.22■□□□□ 0.35
PTPRU-209ENST00000526080 COL2A1P02458 1487 aaPredicted RBP17.22■□□□□ 0.35
PTPRU-209ENST00000526080 PRUNE2Q8WUY3 3088 aa17.22■□□□□ 0.35
PTPRU-209ENST00000526080 RPTORQ8N122 1335 aa17.21■□□□□ 0.35
PTPRU-209ENST00000526080 ATAD5Q96QE3 1844 aa17.21■□□□□ 0.35
PTPRU-209ENST00000526080 RHBDL3P58872 404 aa17.21■□□□□ 0.35
PTPRU-209ENST00000526080 TRIM32Q13049 653 aa17.21■□□□□ 0.35
PTPRU-209ENST00000526080 ZSCAN29Q8IWY8 852 aaPredicted RBP17.21■□□□□ 0.35
PTPRU-209ENST00000526080 ZGPATQ8N5A5 531 aaKnown RBP17.21■□□□□ 0.35
PTPRU-209ENST00000526080 NBPF3Q9H094 633 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms