RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 MAP3K10Q02779 954 aa22.53■■□□□ 1.2
TSPAN4-216ENST00000526055 NAA16Q6N069 864 aaPredicted RBP22.53■■□□□ 1.2
TSPAN4-216ENST00000526055 MIGA2Q7L4E1 593 aa22.53■■□□□ 1.2
TSPAN4-216ENST00000526055 MS4A4AQ96JQ5 239 aa22.53■■□□□ 1.2
TSPAN4-216ENST00000526055 ATRNL1Q5VV63 1379 aa22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 IGF2BP3O00425 579 aaKnown RBP eCLIP22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 PPATQ06203 517 aa22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 NOL9Q5SY16 702 aaKnown RBP22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 ZSCAN29Q8IWY8 852 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 ZFPM1Q8IX07 1006 aa22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 ZKSCAN4Q969J2 545 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 OTUD5Q96G74 571 aa22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 ABHD8Q96I13 439 aa22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 IL1RAPL2Q9NP60 686 aa22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 COL2A1P02458 1487 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-216ENST00000526055 GPR25O00155 361 aa22.51■■□□□ 1.19
TSPAN4-216ENST00000526055 PPP4CP60510 307 aa22.51■■□□□ 1.19
TSPAN4-216ENST00000526055 PPIL2Q13356 520 aa22.51■■□□□ 1.19
TSPAN4-216ENST00000526055 DGKZQ13574 1117 aa22.51■■□□□ 1.19
TSPAN4-216ENST00000526055 CERS3Q8IU89 383 aa22.51■■□□□ 1.19
TSPAN4-216ENST00000526055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.51■■□□□ 1.19
TSPAN4-216ENST00000526055 MCOLN1Q9GZU1 580 aa22.51■■□□□ 1.19
TSPAN4-216ENST00000526055 DDX4Q9NQI0 724 aaKnown RBP22.51■■□□□ 1.19
TSPAN4-216ENST00000526055 AK9Q5TCS8 1911 aa22.51■■□□□ 1.19
TSPAN4-216ENST00000526055 SH3BP5LQ7L8J4 393 aa22.5■■□□□ 1.19
TSPAN4-216ENST00000526055 ZNF296Q8WUU4 475 aaPredicted RBP22.5■■□□□ 1.19
TSPAN4-216ENST00000526055 MAST2Q6P0Q8 1798 aa22.5■■□□□ 1.19
TSPAN4-216ENST00000526055 TBC1D12O60347 775 aa22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 IFIT2P09913 472 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 CETPP11597 493 aa22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 INPP5BP32019 993 aa22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 SNAPC2Q13487 334 aa22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 PICALMQ13492 652 aa22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 CTU1Q7Z7A3 348 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 TEX11Q8IYF3 940 aa22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 CNKSR2Q8WXI2 1034 aa22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 ZCCHC17Q9NP64 241 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 PIH1D3Q9NQM4 214 aaKnown RBP22.49■■□□□ 1.19
TSPAN4-216ENST00000526055 CCL15-CCL14A0A0B4J2E2 113 aa22.48■■□□□ 1.19
TSPAN4-216ENST00000526055 DDTLA6NHG4 134 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-216ENST00000526055 FKTNO75072 461 aa22.48■■□□□ 1.19
TSPAN4-216ENST00000526055 TTF1Q15361 905 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-216ENST00000526055 PKN2Q16513 984 aaKnown RBP22.48■■□□□ 1.19
TSPAN4-216ENST00000526055 CCL15Q16663 113 aa22.48■■□□□ 1.19
TSPAN4-216ENST00000526055 BRI3BPQ8WY22 251 aa22.48■■□□□ 1.19
TSPAN4-216ENST00000526055 PTPN18Q99952 460 aa22.48■■□□□ 1.19
TSPAN4-216ENST00000526055 PHF20L1A8MW92 1017 aa22.47■■□□□ 1.19
TSPAN4-216ENST00000526055 IRF6O14896 467 aa22.47■■□□□ 1.19
TSPAN4-216ENST00000526055 MAP3K12Q12852 859 aa22.47■■□□□ 1.19
TSPAN4-216ENST00000526055 OSBPL5Q9H0X9 879 aaPredicted RBP22.47■■□□□ 1.19
TSPAN4-216ENST00000526055 DOCK2Q92608 1830 aa22.46■■□□□ 1.19
TSPAN4-216ENST00000526055 APBB1O00213 710 aa22.46■■□□□ 1.19
TSPAN4-216ENST00000526055 IDH1O75874 414 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-216ENST00000526055 SH3RF3Q8TEJ3 882 aaPredicted RBP22.46■■□□□ 1.19
TSPAN4-216ENST00000526055 DHX36Q9H2U1 1008 aaKnown RBP22.46■■□□□ 1.19
TSPAN4-216ENST00000526055 AATFQ9NY61 560 aaKnown RBP eCLIP22.46■■□□□ 1.19
TSPAN4-216ENST00000526055 KCNH4Q9UQ05 1017 aa22.46■■□□□ 1.19
TSPAN4-216ENST00000526055 CTNND1O60716 968 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-216ENST00000526055 RRP1P56182 461 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-216ENST00000526055 SCYL3Q8IZE3 742 aa22.45■■□□□ 1.18
TSPAN4-216ENST00000526055 LRRCC1Q9C099 1032 aa22.45■■□□□ 1.18
TSPAN4-216ENST00000526055 R3HDMLQ9H3Y0 253 aa22.45■■□□□ 1.18
TSPAN4-216ENST00000526055 CYP7A1P22680 504 aa22.44■■□□□ 1.18
TSPAN4-216ENST00000526055 CRHR2Q13324 411 aa22.44■■□□□ 1.18
TSPAN4-216ENST00000526055 ADGRA1Q86SQ6 560 aa22.44■■□□□ 1.18
TSPAN4-216ENST00000526055 PICK1Q9NRD5 415 aa22.44■■□□□ 1.18
TSPAN4-216ENST00000526055 CXCL11O14625 94 aa22.43■■□□□ 1.18
TSPAN4-216ENST00000526055 ZFYVE28Q9HCC9 887 aa22.43■■□□□ 1.18
TSPAN4-216ENST00000526055 PI4KBQ9UBF8 816 aa22.43■■□□□ 1.18
TSPAN4-216ENST00000526055 HERC5Q9UII4 1024 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-216ENST00000526055 TAF1CQ15572 869 aaPredicted RBP22.42■■□□□ 1.18
TSPAN4-216ENST00000526055 MAGEB6Q8N7X4 407 aa22.42■■□□□ 1.18
TSPAN4-216ENST00000526055 ANTXR1Q9H6X2 564 aa22.42■■□□□ 1.18
TSPAN4-216ENST00000526055 DCTPP1Q9H773 170 aa22.42■■□□□ 1.18
TSPAN4-216ENST00000526055 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.42■■□□□ 1.182e-8■■■■■ 42.5
TSPAN4-216ENST00000526055 ATP5JP18859 108 aa22.41■■□□□ 1.18
TSPAN4-216ENST00000526055 FAM43AQ8N2R8 423 aa22.41■■□□□ 1.18
TSPAN4-216ENST00000526055 ERO1AQ96HE7 468 aa22.41■■□□□ 1.18
TSPAN4-216ENST00000526055 FLT1P17948 1338 aa22.4■■□□□ 1.18
TSPAN4-216ENST00000526055 BTBD19C9JJ37 291 aa22.4■■□□□ 1.18
TSPAN4-216ENST00000526055 PTPRAP18433 802 aa22.4■■□□□ 1.18
TSPAN4-216ENST00000526055 ANKRD23Q86SG2 305 aa22.4■■□□□ 1.18
TSPAN4-216ENST00000526055 TGFBRAP1Q8WUH2 860 aa22.4■■□□□ 1.18
TSPAN4-216ENST00000526055 YTHDC1Q96MU7 727 aaKnown RBP22.4■■□□□ 1.18
TSPAN4-216ENST00000526055 TBC1D2Q9BYX2 928 aa22.4■■□□□ 1.18
TSPAN4-216ENST00000526055 NDUFB9Q9Y6M9 179 aa22.4■■□□□ 1.18
TSPAN4-216ENST00000526055 MYO5AQ9Y4I1 1855 aaKnown RBP22.39■■□□□ 1.18
TSPAN4-216ENST00000526055 METTL16Q86W50 562 aaKnown RBP22.39■■□□□ 1.17
TSPAN4-216ENST00000526055 FOXP4Q8IVH2 680 aaPredicted RBP22.39■■□□□ 1.17
TSPAN4-216ENST00000526055 CCDC85CA6NKD9 419 aa22.38■■□□□ 1.17
TSPAN4-216ENST00000526055 SP3Q02447 781 aa22.38■■□□□ 1.17
TSPAN4-216ENST00000526055 MAPKAPK5Q8IW41 473 aa22.38■■□□□ 1.17
TSPAN4-216ENST00000526055 DNAJC2Q99543 621 aaKnown RBP22.38■■□□□ 1.17
TSPAN4-216ENST00000526055 ZHX2Q9Y6X8 837 aa22.38■■□□□ 1.17
TSPAN4-216ENST00000526055 GOLIM4O00461 696 aa22.37■■□□□ 1.17
TSPAN4-216ENST00000526055 TLR2O60603 784 aa22.37■■□□□ 1.17
TSPAN4-216ENST00000526055 DYNLL1P63167 89 aaKnown RBP22.37■■□□□ 1.17
TSPAN4-216ENST00000526055 ARHGEF6Q15052 776 aa22.37■■□□□ 1.17
TSPAN4-216ENST00000526055 SLC9C2Q5TAH2 1124 aa22.37■■□□□ 1.17
TSPAN4-216ENST00000526055 FBXO46Q6PJ61 603 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms