RNA–Protein interactions for RNA: ENST00000525334.5

TSPAN4-215, Transcript of tetraspanin 4, humanhuman

TSL 3

Gene TSPAN4, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-215ENST00000525334 LRRCC1Q9C099 1032 aa22.58■■□□□ 1.21
TSPAN4-215ENST00000525334 ANTXR1Q9H6X2 564 aa22.58■■□□□ 1.21
TSPAN4-215ENST00000525334 ATRNL1Q5VV63 1379 aa22.58■■□□□ 1.21
TSPAN4-215ENST00000525334 IGSF3O75054 1194 aa22.57■■□□□ 1.2
TSPAN4-215ENST00000525334 IDH1O75874 414 aaKnown RBP22.57■■□□□ 1.2
TSPAN4-215ENST00000525334 MAP4K4O95819 1239 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-215ENST00000525334 INHBEP58166 350 aa22.57■■□□□ 1.2
TSPAN4-215ENST00000525334 ZKSCAN4Q969J2 545 aaPredicted RBP22.57■■□□□ 1.2
TSPAN4-215ENST00000525334 CRBNQ96SW2 442 aa22.57■■□□□ 1.2
TSPAN4-215ENST00000525334 PCDHB15Q9Y5E8 787 aa22.57■■□□□ 1.2
TSPAN4-215ENST00000525334 SNCAIPQ9Y6H5 919 aa22.57■■□□□ 1.2
TSPAN4-215ENST00000525334 DDTLA6NHG4 134 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-215ENST00000525334 ZSCAN29Q8IWY8 852 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-215ENST00000525334 SH3RF3Q8TEJ3 882 aaPredicted RBP22.56■■□□□ 1.2
TSPAN4-215ENST00000525334 NOL10Q9BSC4 688 aaKnown RBP22.56■■□□□ 1.2
TSPAN4-215ENST00000525334 DCTPP1Q9H773 170 aa22.56■■□□□ 1.2
TSPAN4-215ENST00000525334 AATFQ9NY61 560 aaKnown RBP eCLIP22.56■■□□□ 1.2
TSPAN4-215ENST00000525334 SMARCA5O60264 1052 aaPredicted RBP22.55■■□□□ 1.2
TSPAN4-215ENST00000525334 NPM3O75607 178 aaKnown RBP22.55■■□□□ 1.2
TSPAN4-215ENST00000525334 BAG3O95817 575 aa22.55■■□□□ 1.2
TSPAN4-215ENST00000525334 INPP5BP32019 993 aa22.55■■□□□ 1.2
TSPAN4-215ENST00000525334 TEX11Q8IYF3 940 aa22.55■■□□□ 1.2
TSPAN4-215ENST00000525334 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.55■■□□□ 1.2
TSPAN4-215ENST00000525334 ABHD8Q96I13 439 aa22.55■■□□□ 1.2
TSPAN4-215ENST00000525334 ZNF112Q9UJU3 913 aa22.55■■□□□ 1.2
TSPAN4-215ENST00000525334 SPDYE5A6NIY4 337 aa22.54■■□□□ 1.2
TSPAN4-215ENST00000525334 TBC1D8O95759 1140 aa22.54■■□□□ 1.2
TSPAN4-215ENST00000525334 CYP7A1P22680 504 aa22.54■■□□□ 1.2
TSPAN4-215ENST00000525334 OTUD5Q96G74 571 aa22.54■■□□□ 1.2
TSPAN4-215ENST00000525334 PPP4CP60510 307 aa22.53■■□□□ 1.2
TSPAN4-215ENST00000525334 ERO1BQ86YB8 467 aa22.53■■□□□ 1.2
TSPAN4-215ENST00000525334 IFNL1Q8IU54 200 aa22.53■■□□□ 1.2
TSPAN4-215ENST00000525334 MAGEB6Q8N7X4 407 aa22.53■■□□□ 1.2
TSPAN4-215ENST00000525334 DNAJC2Q99543 621 aaKnown RBP22.53■■□□□ 1.2
TSPAN4-215ENST00000525334 OSBPL5Q9H0X9 879 aaPredicted RBP22.53■■□□□ 1.2
TSPAN4-215ENST00000525334 COL2A1P02458 1487 aaPredicted RBP22.53■■□□□ 1.2
TSPAN4-215ENST00000525334 IGF2BP3O00425 579 aaKnown RBP eCLIP22.52■■□□□ 1.2
TSPAN4-215ENST00000525334 PLCG2P16885 1265 aa22.52■■□□□ 1.2
TSPAN4-215ENST00000525334 MAP3K12Q12852 859 aa22.52■■□□□ 1.2
TSPAN4-215ENST00000525334 TTF1Q15361 905 aaPredicted RBP22.52■■□□□ 1.2
TSPAN4-215ENST00000525334 MS4A4AQ96JQ5 239 aa22.52■■□□□ 1.2
TSPAN4-215ENST00000525334 CFHR5Q9BXR6 569 aa22.52■■□□□ 1.2
TSPAN4-215ENST00000525334 MCOLN1Q9GZU1 580 aa22.52■■□□□ 1.2
TSPAN4-215ENST00000525334 TESPA1A2RU30 521 aaPredicted RBP22.51■■□□□ 1.19
TSPAN4-215ENST00000525334 GOLIM4O00461 696 aa22.51■■□□□ 1.19
TSPAN4-215ENST00000525334 ALDH1A1P00352 501 aa22.51■■□□□ 1.19
TSPAN4-215ENST00000525334 SLURP2P0DP57 97 aa22.51■■□□□ 1.19
TSPAN4-215ENST00000525334 DGKZQ13574 1117 aa22.51■■□□□ 1.19
TSPAN4-215ENST00000525334 CDK5RAP2Q96SN8 1893 aa22.51■■□□□ 1.19
TSPAN4-215ENST00000525334 FOCADQ5VW36 1801 aa22.5■■□□□ 1.19
TSPAN4-215ENST00000525334 PHF20L1A8MW92 1017 aa22.5■■□□□ 1.19
TSPAN4-215ENST00000525334 ATP5JP18859 108 aa22.5■■□□□ 1.19
TSPAN4-215ENST00000525334 DYNLL1P63167 89 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-215ENST00000525334 MAP3K10Q02779 954 aa22.5■■□□□ 1.19
TSPAN4-215ENST00000525334 NOM1Q5C9Z4 860 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-215ENST00000525334 NOL9Q5SY16 702 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-215ENST00000525334 MIGA1Q8NAN2 632 aa22.5■■□□□ 1.19
TSPAN4-215ENST00000525334 EDC3Q96F86 508 aaKnown RBP22.5■■□□□ 1.19
TSPAN4-215ENST00000525334 BOLA2Q9H3K6 86 aa22.5■■□□□ 1.19
TSPAN4-215ENST00000525334 GTF2A2P52657 109 aa22.49■■□□□ 1.19
TSPAN4-215ENST00000525334 PPIL2Q13356 520 aa22.49■■□□□ 1.19
TSPAN4-215ENST00000525334 TMED8Q6PL24 325 aaPredicted RBP22.49■■□□□ 1.19
TSPAN4-215ENST00000525334 TGFBRAP1Q8WUH2 860 aa22.49■■□□□ 1.19
TSPAN4-215ENST00000525334 BRI3BPQ8WY22 251 aa22.49■■□□□ 1.19
TSPAN4-215ENST00000525334 PTPN18Q99952 460 aa22.49■■□□□ 1.19
TSPAN4-215ENST00000525334 R3HDMLQ9H3Y0 253 aa22.49■■□□□ 1.19
TSPAN4-215ENST00000525334 CCL15-CCL14A0A0B4J2E2 113 aa22.48■■□□□ 1.19
TSPAN4-215ENST00000525334 GPR25O00155 361 aa22.48■■□□□ 1.19
TSPAN4-215ENST00000525334 IRF6O14896 467 aa22.48■■□□□ 1.19
TSPAN4-215ENST00000525334 PPATQ06203 517 aa22.48■■□□□ 1.19
TSPAN4-215ENST00000525334 CCL15Q16663 113 aa22.48■■□□□ 1.19
TSPAN4-215ENST00000525334 MAPKAPK5Q8IW41 473 aa22.48■■□□□ 1.19
TSPAN4-215ENST00000525334 ZNF296Q8WUU4 475 aaPredicted RBP22.48■■□□□ 1.19
TSPAN4-215ENST00000525334 PAG1Q9NWQ8 432 aa22.48■■□□□ 1.19
TSPAN4-215ENST00000525334 FLT1P17948 1338 aa22.48■■□□□ 1.19
TSPAN4-215ENST00000525334 TBC1D12O60347 775 aa22.47■■□□□ 1.19
TSPAN4-215ENST00000525334 HAUS7Q99871 368 aa22.47■■□□□ 1.19
TSPAN4-215ENST00000525334 SIPA1L1O43166 1804 aa22.46■■□□□ 1.19
TSPAN4-215ENST00000525334 FAM196BA6NMK8 535 aa22.46■■□□□ 1.19
TSPAN4-215ENST00000525334 PDE6AP16499 860 aa22.46■■□□□ 1.19
TSPAN4-215ENST00000525334 SNAPC2Q13487 334 aa22.46■■□□□ 1.19
TSPAN4-215ENST00000525334 SLC9C2Q5TAH2 1124 aa22.46■■□□□ 1.19
TSPAN4-215ENST00000525334 OTUD7BQ6GQQ9 843 aa22.46■■□□□ 1.19
TSPAN4-215ENST00000525334 CERS3Q8IU89 383 aa22.46■■□□□ 1.19
TSPAN4-215ENST00000525334 SCYL3Q8IZE3 742 aa22.46■■□□□ 1.19
TSPAN4-215ENST00000525334 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.46■■□□□ 1.191e-7■■■■■ 39.7
TSPAN4-215ENST00000525334 DOCK1Q14185 1865 aa22.45■■□□□ 1.19
TSPAN4-215ENST00000525334 CETPP11597 493 aa22.45■■□□□ 1.18
TSPAN4-215ENST00000525334 CTU1Q7Z7A3 348 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-215ENST00000525334 DHX36Q9H2U1 1008 aaKnown RBP22.45■■□□□ 1.18
TSPAN4-215ENST00000525334 ECHDC1Q9NTX5 307 aa22.45■■□□□ 1.18
TSPAN4-215ENST00000525334 RIOK1Q9BRS2 568 aaKnown RBP22.44■■□□□ 1.18
TSPAN4-215ENST00000525334 ZNF532Q9HCE3 1301 aa22.44■■□□□ 1.18
TSPAN4-215ENST00000525334 PICK1Q9NRD5 415 aa22.44■■□□□ 1.18
TSPAN4-215ENST00000525334 TCRBV5S4A2TA0A5A2 114 aa22.43■■□□□ 1.18
TSPAN4-215ENST00000525334 CTNND1O60716 968 aaKnown RBP22.43■■□□□ 1.18
TSPAN4-215ENST00000525334 CRHR2Q13324 411 aa22.43■■□□□ 1.18
TSPAN4-215ENST00000525334 FAM43AQ8N2R8 423 aa22.43■■□□□ 1.18
TSPAN4-215ENST00000525334 PI4KBQ9UBF8 816 aa22.43■■□□□ 1.18
TSPAN4-215ENST00000525334 SAP30BPQ9UHR5 308 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms