RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 HDAC5Q9UQL6 1122 aa29.74■■■□□ 2.35
USP47-205ENST00000525257 ZHX2Q9Y6X8 837 aa29.74■■■□□ 2.35
USP47-205ENST00000525257 GRK4P32298 578 aa29.73■■■□□ 2.35
USP47-205ENST00000525257 TIMM10P62072 90 aa29.73■■■□□ 2.35
USP47-205ENST00000525257 SH3BP5LQ7L8J4 393 aa29.73■■■□□ 2.35
USP47-205ENST00000525257 COLQQ9Y215 455 aaPredicted RBP29.73■■■□□ 2.35
USP47-205ENST00000525257 MGAMO43451 1857 aa29.72■■■□□ 2.35
USP47-205ENST00000525257 BCRP11274 1271 aa29.72■■■□□ 2.35
USP47-205ENST00000525257 A0A0G2JLL6 359 aaPredicted RBP29.71■■■□□ 2.35
USP47-205ENST00000525257 H0YGN5 161 aa29.71■■■□□ 2.35
USP47-205ENST00000525257 CT47B1P0C2W7 299 aaPredicted RBP29.71■■■□□ 2.35
USP47-205ENST00000525257 SLURP2P0DP57 97 aa29.71■■■□□ 2.35
USP47-205ENST00000525257 PTPRAP18433 802 aa29.71■■■□□ 2.35
USP47-205ENST00000525257 FXR1P51114 621 aaKnown RBP eCLIP29.71■■■□□ 2.35
USP47-205ENST00000525257 PICALMQ13492 652 aa29.71■■■□□ 2.35
USP47-205ENST00000525257 GADL1Q6ZQY3 521 aa29.71■■■□□ 2.35
USP47-205ENST00000525257 PRRT2Q7Z6L0 340 aaPredicted RBP29.71■■■□□ 2.35
USP47-205ENST00000525257 DOCK1Q14185 1865 aa29.71■■■□□ 2.35
USP47-205ENST00000525257 DDTLA6NHG4 134 aaPredicted RBP29.7■■■□□ 2.35
USP47-205ENST00000525257 ZBTB22O15209 634 aa29.7■■■□□ 2.35
USP47-205ENST00000525257 BTDP43251 543 aa29.7■■■□□ 2.35
USP47-205ENST00000525257 FCGRTP55899 365 aa29.7■■■□□ 2.35
USP47-205ENST00000525257 PRKCZQ05513 592 aa29.7■■■□□ 2.35
USP47-205ENST00000525257 FASTKD5Q7L8L6 764 aaKnown RBP29.7■■■□□ 2.35
USP47-205ENST00000525257 SLF2Q8IX21 1173 aa29.7■■■□□ 2.35
USP47-205ENST00000525257 DDX4Q9NQI0 724 aaKnown RBP29.7■■■□□ 2.35
USP47-205ENST00000525257 BIN2Q9UBW5 565 aaPredicted RBP29.7■■■□□ 2.35
USP47-205ENST00000525257 PTPRFP10586 1907 aa29.69■■■□□ 2.34
USP47-205ENST00000525257 A0A1B0GUL7 405 aa29.69■■■□□ 2.34
USP47-205ENST00000525257 AFG3L2Q9Y4W6 797 aa29.69■■■□□ 2.34
USP47-205ENST00000525257 PDS5AQ29RF7 1337 aaKnown RBP29.69■■■□□ 2.34
USP47-205ENST00000525257 CCL5P13501 91 aa29.68■■■□□ 2.34
USP47-205ENST00000525257 TFCP2Q12800 502 aa29.68■■■□□ 2.34
USP47-205ENST00000525257 SPTY2D1Q68D10 685 aaPredicted RBP29.68■■■□□ 2.34
USP47-205ENST00000525257 XAGE2Q96GT9 111 aa29.68■■■□□ 2.34
USP47-205ENST00000525257 MROH7-TTC4A0A0A0MT08 1334 aa29.68■■■□□ 2.34
USP47-205ENST00000525257 PHIPQ8WWQ0 1821 aa29.67■■■□□ 2.34
USP47-205ENST00000525257 FAM163AQ96GL9 167 aaPredicted RBP29.67■■■□□ 2.34
USP47-205ENST00000525257 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.67■■■□□ 2.34
USP47-205ENST00000525257 GABRQQ9UN88 632 aa29.67■■■□□ 2.34
USP47-205ENST00000525257 SRGAP3O43295 1099 aa29.66■■■□□ 2.34
USP47-205ENST00000525257 MAP3K10Q02779 954 aa29.66■■■□□ 2.34
USP47-205ENST00000525257 NKX2-3Q8TAU0 364 aa29.66■■■□□ 2.34
USP47-205ENST00000525257 AKAP2Q9Y2D5 859 aa29.66■■■□□ 2.34
USP47-205ENST00000525257 TRIOBPQ9H2D6 2365 aa29.66■■■□□ 2.34
USP47-205ENST00000525257 TRIM75PA6NK02 468 aa29.65■■■□□ 2.34
USP47-205ENST00000525257 CTNND1O60716 968 aaKnown RBP29.65■■■□□ 2.34
USP47-205ENST00000525257 UBXN2AP68543 259 aa29.65■■■□□ 2.34
USP47-205ENST00000525257 MECOMQ03112 1051 aa29.65■■■□□ 2.34
USP47-205ENST00000525257 MVPQ14764 893 aaKnown RBP29.65■■■□□ 2.34
USP47-205ENST00000525257 ERICH6Q7L0X2 663 aa29.65■■■□□ 2.34
USP47-205ENST00000525257 CCDC84Q86UT8 332 aaPredicted RBP29.65■■■□□ 2.34
USP47-205ENST00000525257 RNF208Q9H0X6 261 aa29.65■■■□□ 2.34
USP47-205ENST00000525257 GJB1P08034 283 aa29.64■■■□□ 2.34
USP47-205ENST00000525257 GJA8P48165 433 aa29.64■■■□□ 2.34
USP47-205ENST00000525257 RARSP54136 660 aaKnown RBP29.64■■■□□ 2.34
USP47-205ENST00000525257 SLAIN1Q8ND83 568 aa29.64■■■□□ 2.34
USP47-205ENST00000525257 DPF3Q92784 378 aa29.64■■■□□ 2.34
USP47-205ENST00000525257 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP29.64■■■□□ 2.34
USP47-205ENST00000525257 GNAI3P08754 354 aa29.63■■■□□ 2.33
USP47-205ENST00000525257 ZNF384Q8TF68 577 aa29.63■■■□□ 2.33
USP47-205ENST00000525257 NEUROD6Q96NK8 337 aa29.63■■■□□ 2.33
USP47-205ENST00000525257 SLC45A1Q9Y2W3 748 aa29.63■■■□□ 2.33
USP47-205ENST00000525257 GPR75-ASB3A0A0A6YYF3 556 aa29.62■■■□□ 2.33
USP47-205ENST00000525257 RHBDL3P58872 404 aa29.62■■■□□ 2.33
USP47-205ENST00000525257 SMCR8Q8TEV9 937 aaPredicted RBP29.62■■■□□ 2.33
USP47-205ENST00000525257 FAM196BA6NMK8 535 aa29.61■■■□□ 2.33
USP47-205ENST00000525257 MTX1Q13505 466 aa29.61■■■□□ 2.33
USP47-205ENST00000525257 PI16Q6UXB8 463 aa29.61■■■□□ 2.33
USP47-205ENST00000525257 HMG20BQ9P0W2 317 aa29.61■■■□□ 2.33
USP47-205ENST00000525257 ADCY3O60266 1144 aa29.6■■■□□ 2.33
USP47-205ENST00000525257 CHRDL2Q6WN34 429 aa29.6■■■□□ 2.33
USP47-205ENST00000525257 UNC93B1Q9H1C4 597 aa29.6■■■□□ 2.33
USP47-205ENST00000525257 TNPO2O14787 897 aaKnown RBP29.59■■■□□ 2.33
USP47-205ENST00000525257 ELNP15502 786 aa29.59■■■□□ 2.33
USP47-205ENST00000525257 FLT3LGP49771 235 aa29.59■■■□□ 2.33
USP47-205ENST00000525257 GORABQ5T7V8 394 aa29.59■■■□□ 2.33
USP47-205ENST00000525257 UBE2Q1Q7Z7E8 422 aa29.59■■■□□ 2.33
USP47-205ENST00000525257 U2AF1L4Q8WU68 220 aaKnown RBP29.59■■■□□ 2.33
USP47-205ENST00000525257 ARHGAP45Q92619 1136 aa29.59■■■□□ 2.33
USP47-205ENST00000525257 XPO5Q9HAV4 1204 aaKnown RBP eCLIP29.59■■■□□ 2.33
USP47-205ENST00000525257 AGTPBP1Q9UPW5 1226 aa29.59■■■□□ 2.33
USP47-205ENST00000525257 TBC1D9Q6ZT07 1266 aa29.58■■■□□ 2.33
USP47-205ENST00000525257 SPATA5Q8NB90 893 aa29.58■■■□□ 2.33
USP47-205ENST00000525257 GSTO1P78417 241 aa29.57■■■□□ 2.32
USP47-205ENST00000525257 TREML2Q5T2D2 321 aa29.57■■■□□ 2.32
USP47-205ENST00000525257 NSUN4Q96CB9 384 aaKnown RBP29.57■■■□□ 2.32
USP47-205ENST00000525257 HTATIP2Q9BUP3 242 aa29.57■■■□□ 2.32
USP47-205ENST00000525257 ATAD5Q96QE3 1844 aa29.57■■■□□ 2.32
USP47-205ENST00000525257 RANBP2P49792 3224 aaKnown RBP29.56■■■□□ 2.32
USP47-205ENST00000525257 TBC1D12O60347 775 aa29.56■■■□□ 2.32
USP47-205ENST00000525257 ANKRD13CQ8N6S4 541 aa29.56■■■□□ 2.32
USP47-205ENST00000525257 RAI14Q9P0K7 980 aa29.56■■■□□ 2.32
USP47-205ENST00000525257 TAOK2Q9UL54 1235 aa29.56■■■□□ 2.32
USP47-205ENST00000525257 NPM3O75607 178 aaKnown RBP29.55■■■□□ 2.32
USP47-205ENST00000525257 FARP2O94887 1054 aaPredicted RBP29.55■■■□□ 2.32
USP47-205ENST00000525257 INHAP05111 366 aa29.55■■■□□ 2.32
USP47-205ENST00000525257 LDHCP07864 332 aa29.55■■■□□ 2.32
USP47-205ENST00000525257 LOC285556D6RIA3 1793 aa29.54■■■□□ 2.32
USP47-205ENST00000525257 SZT2Q5T011 3432 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms