RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 RPAP1Q9BWH6 1393 aaPredicted RBP15.44■□□□□ 0.06
SMCO4-202ENST00000525141 AK9Q5TCS8 1911 aa15.43■□□□□ 0.06
SMCO4-202ENST00000525141 ENTPD3O75355 529 aa15.43■□□□□ 0.06
SMCO4-202ENST00000525141 BTDP43251 543 aa15.43■□□□□ 0.06
SMCO4-202ENST00000525141 GTF2A2P52657 109 aa15.43■□□□□ 0.06
SMCO4-202ENST00000525141 GORABQ5T7V8 394 aa15.43■□□□□ 0.06
SMCO4-202ENST00000525141 RFX7Q2KHR2 1363 aa15.43■□□□□ 0.06
SMCO4-202ENST00000525141 ATRNL1Q5VV63 1379 aa15.43■□□□□ 0.06
SMCO4-202ENST00000525141 CCL15-CCL14A0A0B4J2E2 113 aa15.42■□□□□ 0.06
SMCO4-202ENST00000525141 MYCNP04198 464 aaPredicted RBP15.42■□□□□ 0.06
SMCO4-202ENST00000525141 CYP2E1P05181 493 aaPredicted RBP15.42■□□□□ 0.06
SMCO4-202ENST00000525141 UQCRFS1P1P0C7P4 283 aa15.42■□□□□ 0.06
SMCO4-202ENST00000525141 MOGSQ13724 837 aa15.42■□□□□ 0.06
SMCO4-202ENST00000525141 PKN2Q16513 984 aaKnown RBP15.42■□□□□ 0.06
SMCO4-202ENST00000525141 CCL15Q16663 113 aa15.42■□□□□ 0.06
SMCO4-202ENST00000525141 DCAF15Q66K64 600 aa15.42■□□□□ 0.06
SMCO4-202ENST00000525141 OTUD7BQ6GQQ9 843 aa15.42■□□□□ 0.06
SMCO4-202ENST00000525141 DZIP1Q86YF9 867 aaKnown RBP15.42■□□□□ 0.06
SMCO4-202ENST00000525141 SIRT2Q8IXJ6 389 aa15.42■□□□□ 0.06
SMCO4-202ENST00000525141 HOOK2Q96ED9 719 aa15.42■□□□□ 0.06
SMCO4-202ENST00000525141 CCDC8Q9H0W5 538 aaPredicted RBP15.42■□□□□ 0.06
SMCO4-202ENST00000525141 TLR7Q9NYK1 1049 aaKnown RBP15.42■□□□□ 0.06
SMCO4-202ENST00000525141 COG6Q9Y2V7 657 aa15.42■□□□□ 0.06
SMCO4-202ENST00000525141 MROH7-TTC4A0A0A0MT08 1334 aa15.42■□□□□ 0.06
SMCO4-202ENST00000525141 BTBD19C9JJ37 291 aa15.41■□□□□ 0.06
SMCO4-202ENST00000525141 PPATQ06203 517 aa15.41■□□□□ 0.06
SMCO4-202ENST00000525141 PPIL2Q13356 520 aa15.41■□□□□ 0.06
SMCO4-202ENST00000525141 C20orf194Q5TEA3 1177 aa15.41■□□□□ 0.06
SMCO4-202ENST00000525141 ZNF512BQ96KM6 892 aaPredicted RBP15.41■□□□□ 0.06
SMCO4-202ENST00000525141 DBNLQ9UJU6 430 aaKnown RBP15.41■□□□□ 0.06
SMCO4-202ENST00000525141 ZAP70P43403 619 aa15.4■□□□□ 0.06
SMCO4-202ENST00000525141 RRP1P56182 461 aaKnown RBP15.4■□□□□ 0.06
SMCO4-202ENST00000525141 NOL9Q5SY16 702 aaKnown RBP15.4■□□□□ 0.06
SMCO4-202ENST00000525141 OTOP1Q7RTM1 612 aa15.4■□□□□ 0.06
SMCO4-202ENST00000525141 SLF2Q8IX21 1173 aa15.4■□□□□ 0.06
SMCO4-202ENST00000525141 CD99L2Q8TCZ2 262 aa15.4■□□□□ 0.06
SMCO4-202ENST00000525141 ZBTB40Q9NUA8 1239 aa15.4■□□□□ 0.06
SMCO4-202ENST00000525141 RAI14Q9P0K7 980 aa15.4■□□□□ 0.06
SMCO4-202ENST00000525141 KCNH4Q9UQ05 1017 aa15.4■□□□□ 0.06
SMCO4-202ENST00000525141 LDHCP07864 332 aa15.39■□□□□ 0.05
SMCO4-202ENST00000525141 CETPP11597 493 aa15.39■□□□□ 0.05
SMCO4-202ENST00000525141 SP3Q02447 781 aa15.39■□□□□ 0.05
SMCO4-202ENST00000525141 OS9Q13438 667 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-202ENST00000525141 PICALMQ13492 652 aa15.39■□□□□ 0.05
SMCO4-202ENST00000525141 CCDC158Q5M9N0 1113 aa15.39■□□□□ 0.05
SMCO4-202ENST00000525141 FBXO46Q6PJ61 603 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-202ENST00000525141 ADGRA1Q86SQ6 560 aa15.39■□□□□ 0.05
SMCO4-202ENST00000525141 PIH1D3Q9NQM4 214 aaKnown RBP15.39■□□□□ 0.05
SMCO4-202ENST00000525141 EXOC6BQ9Y2D4 811 aa15.39■□□□□ 0.05
SMCO4-202ENST00000525141 MYO5AQ9Y4I1 1855 aaKnown RBP15.39■□□□□ 0.05
SMCO4-202ENST00000525141 SOX10P56693 466 aa15.38■□□□□ 0.05
SMCO4-202ENST00000525141 PPP4CP60510 307 aa15.38■□□□□ 0.05
SMCO4-202ENST00000525141 SNAPC2Q13487 334 aa15.38■□□□□ 0.05
SMCO4-202ENST00000525141 RRP1BQ14684 758 aaKnown RBP15.38■□□□□ 0.05
SMCO4-202ENST00000525141 TTC39AQ5SRH9 613 aa15.38■□□□□ 0.05
SMCO4-202ENST00000525141 POTEHQ6S545 545 aa15.38■□□□□ 0.05
SMCO4-202ENST00000525141 SH3RF3Q8TEJ3 882 aaPredicted RBP15.38■□□□□ 0.05
SMCO4-202ENST00000525141 LRP2BPQ9P2M1 347 aa15.38■□□□□ 0.05
SMCO4-202ENST00000525141 TRIM17Q9Y577 477 aa15.38■□□□□ 0.05
SMCO4-202ENST00000525141 TBC1D12O60347 775 aa15.37■□□□□ 0.05
SMCO4-202ENST00000525141 GSTO1P78417 241 aa15.37■□□□□ 0.05
SMCO4-202ENST00000525141 MLLT1Q03111 559 aaPredicted RBP15.37■□□□□ 0.05
SMCO4-202ENST00000525141 TAF1CQ15572 869 aaPredicted RBP15.37■□□□□ 0.05
SMCO4-202ENST00000525141 GPAT2Q6NUI2 795 aa15.37■□□□□ 0.05
SMCO4-202ENST00000525141 ZFYVE28Q9HCC9 887 aa15.37■□□□□ 0.05
SMCO4-202ENST00000525141 NDUFB9Q9Y6M9 179 aa15.37■□□□□ 0.05
SMCO4-202ENST00000525141 FAM196BA6NMK8 535 aa15.36■□□□□ 0.05
SMCO4-202ENST00000525141 TLR2O60603 784 aa15.36■□□□□ 0.05
SMCO4-202ENST00000525141 PTPRAP18433 802 aa15.36■□□□□ 0.05
SMCO4-202ENST00000525141 ZSCAN29Q8IWY8 852 aaPredicted RBP15.36■□□□□ 0.05
SMCO4-202ENST00000525141 RPAP2Q8IXW5 612 aaPredicted RBP15.36■□□□□ 0.05
SMCO4-202ENST00000525141 ERO1AQ96HE7 468 aa15.36■□□□□ 0.05
SMCO4-202ENST00000525141 ANTXR1Q9H6X2 564 aa15.36■□□□□ 0.05
SMCO4-202ENST00000525141 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.36■□□□□ 0.05
SMCO4-202ENST00000525141 PTPN22Q9Y2R2 807 aa15.36■□□□□ 0.05
SMCO4-202ENST00000525141 AFG3L2Q9Y4W6 797 aa15.36■□□□□ 0.05
SMCO4-202ENST00000525141 CXCL11O14625 94 aa15.35■□□□□ 0.05
SMCO4-202ENST00000525141 MAP4K4O95819 1239 aaPredicted RBP15.35■□□□□ 0.05
SMCO4-202ENST00000525141 CTGFP29279 349 aa15.35■□□□□ 0.05
SMCO4-202ENST00000525141 C17orf99Q6UX52 265 aa15.35■□□□□ 0.05
SMCO4-202ENST00000525141 ANKRD23Q86SG2 305 aa15.35■□□□□ 0.05
SMCO4-202ENST00000525141 SCYL3Q8IZE3 742 aa15.35■□□□□ 0.05
SMCO4-202ENST00000525141 RHPN1Q8TCX5 695 aa15.35■□□□□ 0.05
SMCO4-202ENST00000525141 OSBPL5Q9H0X9 879 aaPredicted RBP15.35■□□□□ 0.05
SMCO4-202ENST00000525141 IL1RAPL2Q9NP60 686 aa15.35■□□□□ 0.05
SMCO4-202ENST00000525141 ZCCHC17Q9NP64 241 aaKnown RBP15.35■□□□□ 0.05
SMCO4-202ENST00000525141 ZHX2Q9Y6X8 837 aa15.35■□□□□ 0.05
SMCO4-202ENST00000525141 TNRC18O15417 2968 aaPredicted RBP15.35■□□□□ 0.05
SMCO4-202ENST00000525141 CTNND1O60716 968 aaKnown RBP15.34■□□□□ 0.05
SMCO4-202ENST00000525141 DYNLL1P63167 89 aaKnown RBP15.34■□□□□ 0.05
SMCO4-202ENST00000525141 JAG1P78504 1218 aa15.34■□□□□ 0.05
SMCO4-202ENST00000525141 NAA16Q6N069 864 aaPredicted RBP15.34■□□□□ 0.05
SMCO4-202ENST00000525141 CCDC84Q86UT8 332 aaPredicted RBP15.34■□□□□ 0.05
SMCO4-202ENST00000525141 ARHGAP39Q9C0H5 1083 aa15.34■□□□□ 0.05
SMCO4-202ENST00000525141 EFCC1Q9HA90 598 aa15.34■□□□□ 0.05
SMCO4-202ENST00000525141 AATFQ9NY61 560 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMCO4-202ENST00000525141 PDHXO00330 501 aa15.33■□□□□ 0.04
SMCO4-202ENST00000525141 AACSQ86V21 672 aa15.33■□□□□ 0.04
SMCO4-202ENST00000525141 TEX11Q8IYF3 940 aa15.33■□□□□ 0.04
SMCO4-202ENST00000525141 ADGRA2Q96PE1 1338 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms