RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 INPP5BP32019 993 aa15.7■□□□□ 0.1
TRAPPC4-205ENST00000525079 OTUD5Q96G74 571 aa15.7■□□□□ 0.1
TRAPPC4-205ENST00000525079 ANTXR1Q9H6X2 564 aa15.7■□□□□ 0.1
TRAPPC4-205ENST00000525079 SNCAIPQ9Y6H5 919 aa15.7■□□□□ 0.1
TRAPPC4-205ENST00000525079 RFX7Q2KHR2 1363 aa15.7■□□□□ 0.1
TRAPPC4-205ENST00000525079 IGF2BP3O00425 579 aaKnown RBP eCLIP15.69■□□□□ 0.1
TRAPPC4-205ENST00000525079 SMARCA5O60264 1052 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC4-205ENST00000525079 IDH1O75874 414 aaKnown RBP15.69■□□□□ 0.1
TRAPPC4-205ENST00000525079 ADGRA1Q86SQ6 560 aa15.69■□□□□ 0.1
TRAPPC4-205ENST00000525079 IFNL1Q8IU54 200 aa15.69■□□□□ 0.1
TRAPPC4-205ENST00000525079 SH3RF3Q8TEJ3 882 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC4-205ENST00000525079 NOL10Q9BSC4 688 aaKnown RBP15.69■□□□□ 0.1
TRAPPC4-205ENST00000525079 R3HDMLQ9H3Y0 253 aa15.69■□□□□ 0.1
TRAPPC4-205ENST00000525079 AATFQ9NY61 560 aaKnown RBP eCLIP15.69■□□□□ 0.1
TRAPPC4-205ENST00000525079 CYP7A1P22680 504 aa15.68■□□□□ 0.1
TRAPPC4-205ENST00000525079 INHBEP58166 350 aa15.68■□□□□ 0.1
TRAPPC4-205ENST00000525079 TEX11Q8IYF3 940 aa15.68■□□□□ 0.1
TRAPPC4-205ENST00000525079 PTPN18Q99952 460 aa15.68■□□□□ 0.1
TRAPPC4-205ENST00000525079 MAST2Q6P0Q8 1798 aa15.67■□□□□ 0.1
TRAPPC4-205ENST00000525079 DOCK2Q92608 1830 aa15.67■□□□□ 0.1
TRAPPC4-205ENST00000525079 DGKZQ13574 1117 aa15.67■□□□□ 0.1
TRAPPC4-205ENST00000525079 MS4A4AQ96JQ5 239 aa15.67■□□□□ 0.1
TRAPPC4-205ENST00000525079 CRBNQ96SW2 442 aa15.67■□□□□ 0.1
TRAPPC4-205ENST00000525079 ZNF112Q9UJU3 913 aa15.67■□□□□ 0.1
TRAPPC4-205ENST00000525079 SPDYE5A6NIY4 337 aa15.66■□□□□ 0.1
TRAPPC4-205ENST00000525079 BAG3O95817 575 aa15.66■□□□□ 0.1
TRAPPC4-205ENST00000525079 DYNLL1P63167 89 aaKnown RBP15.66■□□□□ 0.1
TRAPPC4-205ENST00000525079 ERO1BQ86YB8 467 aa15.66■□□□□ 0.1
TRAPPC4-205ENST00000525079 MAGEB6Q8N7X4 407 aa15.66■□□□□ 0.1
TRAPPC4-205ENST00000525079 DNAJC2Q99543 621 aaKnown RBP15.66■□□□□ 0.1
TRAPPC4-205ENST00000525079 LRRCC1Q9C099 1032 aa15.66■□□□□ 0.1
TRAPPC4-205ENST00000525079 MCOLN1Q9GZU1 580 aa15.66■□□□□ 0.1
TRAPPC4-205ENST00000525079 PCDHB15Q9Y5E8 787 aa15.66■□□□□ 0.1
TRAPPC4-205ENST00000525079 ATRNL1Q5VV63 1379 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 LAMB1P07942 1786 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 CCL15-CCL14A0A0B4J2E2 113 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 TESPA1A2RU30 521 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 FAM196BA6NMK8 535 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 GPR25O00155 361 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 MAP4K4O95819 1239 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 ALDH1A1P00352 501 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 GTF2A2P52657 109 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 CCL15Q16663 113 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 MIGA1Q8NAN2 632 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 TGFBRAP1Q8WUH2 860 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 ZNF296Q8WUU4 475 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 BRI3BPQ8WY22 251 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 EDC3Q96F86 508 aaKnown RBP15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 ABHD8Q96I13 439 aa15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 OSBPL5Q9H0X9 879 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC4-205ENST00000525079 PHF20L1A8MW92 1017 aa15.64■□□□□ 0.09
TRAPPC4-205ENST00000525079 GOLIM4O00461 696 aa15.64■□□□□ 0.09
TRAPPC4-205ENST00000525079 IRF6O14896 467 aa15.64■□□□□ 0.09
TRAPPC4-205ENST00000525079 PPP4CP60510 307 aa15.64■□□□□ 0.09
TRAPPC4-205ENST00000525079 MAP3K12Q12852 859 aa15.64■□□□□ 0.09
TRAPPC4-205ENST00000525079 OTUD7BQ6GQQ9 843 aa15.64■□□□□ 0.09
TRAPPC4-205ENST00000525079 MAPKAPK5Q8IW41 473 aa15.64■□□□□ 0.09
TRAPPC4-205ENST00000525079 BOLA2Q9H3K6 86 aa15.64■□□□□ 0.09
TRAPPC4-205ENST00000525079 DCTPP1Q9H773 170 aa15.64■□□□□ 0.09
TRAPPC4-205ENST00000525079 NPM3O75607 178 aaKnown RBP15.63■□□□□ 0.09
TRAPPC4-205ENST00000525079 PLCG2P16885 1265 aa15.63■□□□□ 0.09
TRAPPC4-205ENST00000525079 PPATQ06203 517 aa15.63■□□□□ 0.09
TRAPPC4-205ENST00000525079 PPIL2Q13356 520 aa15.63■□□□□ 0.09
TRAPPC4-205ENST00000525079 FKTNO75072 461 aa15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 CETPP11597 493 aa15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 MAP3K10Q02779 954 aa15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 CRHR2Q13324 411 aa15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 SNAPC2Q13487 334 aa15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 TTF1Q15361 905 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 SLC4A8Q2Y0W8 1093 aa15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 NOL9Q5SY16 702 aaKnown RBP15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 FAM43AQ8N2R8 423 aa15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 CFHR5Q9BXR6 569 aa15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 SAP30BPQ9UHR5 308 aaKnown RBP15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 CDK5RAP2Q96SN8 1893 aa15.62■□□□□ 0.09
TRAPPC4-205ENST00000525079 IGSF3O75054 1194 aa15.61■□□□□ 0.09
TRAPPC4-205ENST00000525079 ATP5JP18859 108 aa15.61■□□□□ 0.09
TRAPPC4-205ENST00000525079 SLC9C2Q5TAH2 1124 aa15.61■□□□□ 0.09
TRAPPC4-205ENST00000525079 CTU1Q7Z7A3 348 aaKnown RBP15.61■□□□□ 0.09
TRAPPC4-205ENST00000525079 CCDC84Q86UT8 332 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC4-205ENST00000525079 SCYL3Q8IZE3 742 aa15.61■□□□□ 0.09
TRAPPC4-205ENST00000525079 PICK1Q9NRD5 415 aa15.61■□□□□ 0.09
TRAPPC4-205ENST00000525079 PALD1Q9ULE6 856 aa15.61■□□□□ 0.09
TRAPPC4-205ENST00000525079 FLT1P17948 1338 aa15.61■□□□□ 0.09
TRAPPC4-205ENST00000525079 CCDC85CA6NKD9 419 aa15.6■□□□□ 0.09
TRAPPC4-205ENST00000525079 BTBD19C9JJ37 291 aa15.6■□□□□ 0.09
TRAPPC4-205ENST00000525079 PDE6AP16499 860 aa15.6■□□□□ 0.09
TRAPPC4-205ENST00000525079 USP5P45974 858 aa15.6■□□□□ 0.09
TRAPPC4-205ENST00000525079 TAF1CQ15572 869 aaPredicted RBP15.6■□□□□ 0.09
TRAPPC4-205ENST00000525079 SLFNL1Q499Z3 407 aa15.6■□□□□ 0.09
TRAPPC4-205ENST00000525079 PAG1Q9NWQ8 432 aa15.6■□□□□ 0.09
TRAPPC4-205ENST00000525079 ZHX2Q9Y6X8 837 aa15.6■□□□□ 0.09
TRAPPC4-205ENST00000525079 COL2A1P02458 1487 aaPredicted RBP15.59■□□□□ 0.09
TRAPPC4-205ENST00000525079 TBC1D12O60347 775 aa15.59■□□□□ 0.09
TRAPPC4-205ENST00000525079 CTNND1O60716 968 aaKnown RBP15.59■□□□□ 0.09
TRAPPC4-205ENST00000525079 PTPRAP18433 802 aa15.59■□□□□ 0.09
TRAPPC4-205ENST00000525079 RRP1BQ14684 758 aaKnown RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms