RNA–Protein interactions for RNA: ENST00000524797.1

TRAPPC4-204, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,924 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-204ENST00000524797 OTUD5Q96G74 571 aa13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 MS4A4AQ96JQ5 239 aa13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 DDX4Q9NQI0 724 aaKnown RBP13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 LRP2BPQ9P2M1 347 aa13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 ATRNL1Q5VV63 1379 aa13.69□□□□□ -0.22
TRAPPC4-204ENST00000524797 CYP2E1P05181 493 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 INPP5BP32019 993 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 SH3BP5LQ7L8J4 393 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 ERO1BQ86YB8 467 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 PTPN18Q99952 460 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 PHIPQ8WWQ0 1821 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 ATAD5Q96QE3 1844 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 SIPA1L1O43166 1804 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 HMMRO75330 724 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 MAP4K4O95819 1239 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 ZAP70P43403 619 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 GTF2A2P52657 109 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 PICALMQ13492 652 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 OTUD7BQ6GQQ9 843 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 RHPN1Q8TCX5 695 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 BRI3BPQ8WY22 251 aa13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 PIH1D3Q9NQM4 214 aaKnown RBP13.68□□□□□ -0.22
TRAPPC4-204ENST00000524797 CCL15-CCL14A0A0B4J2E2 113 aa13.67□□□□□ -0.22
TRAPPC4-204ENST00000524797 FKTNO75072 461 aa13.67□□□□□ -0.22
TRAPPC4-204ENST00000524797 NPM3O75607 178 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-204ENST00000524797 PPIL2Q13356 520 aa13.67□□□□□ -0.22
TRAPPC4-204ENST00000524797 CCL15Q16663 113 aa13.67□□□□□ -0.22
TRAPPC4-204ENST00000524797 NOL9Q5SY16 702 aaKnown RBP13.67□□□□□ -0.22
TRAPPC4-204ENST00000524797 NAA16Q6N069 864 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-204ENST00000524797 AACSQ86V21 672 aa13.67□□□□□ -0.22
TRAPPC4-204ENST00000524797 COL2A1P02458 1487 aaPredicted RBP13.67□□□□□ -0.22
TRAPPC4-204ENST00000524797 DDTLA6NHG4 134 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-204ENST00000524797 IL1RAPL2Q9NP60 686 aa13.66□□□□□ -0.22
TRAPPC4-204ENST00000524797 PTPRFP10586 1907 aa13.66□□□□□ -0.22
TRAPPC4-204ENST00000524797 CCDC85CA6NKD9 419 aa13.66□□□□□ -0.22
TRAPPC4-204ENST00000524797 IGSF3O75054 1194 aa13.66□□□□□ -0.22
TRAPPC4-204ENST00000524797 ZSCAN29Q8IWY8 852 aaPredicted RBP13.66□□□□□ -0.22
TRAPPC4-204ENST00000524797 MYH1P12882 1939 aa13.65□□□□□ -0.22
TRAPPC4-204ENST00000524797 PHF20L1A8MW92 1017 aa13.65□□□□□ -0.22
TRAPPC4-204ENST00000524797 MAP3K10Q02779 954 aa13.65□□□□□ -0.22
TRAPPC4-204ENST00000524797 PPATQ06203 517 aa13.65□□□□□ -0.22
TRAPPC4-204ENST00000524797 CRHR2Q13324 411 aa13.65□□□□□ -0.22
TRAPPC4-204ENST00000524797 TEX11Q8IYF3 940 aa13.65□□□□□ -0.22
TRAPPC4-204ENST00000524797 SH3RF3Q8TEJ3 882 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC4-204ENST00000524797 KIF1BPQ96EK5 621 aa13.65□□□□□ -0.22
TRAPPC4-204ENST00000524797 NOL10Q9BSC4 688 aaKnown RBP13.65□□□□□ -0.22
TRAPPC4-204ENST00000524797 APBB1O00213 710 aa13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 IRF6O14896 467 aa13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 RAB11FIP3O75154 756 aa13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 CETPP11597 493 aa13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 ADGRA1Q86SQ6 560 aa13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 FAM43AQ8N2R8 423 aa13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 SLURP2P0DP57 97 aa13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 PPP4CP60510 307 aa13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 SNAPC2Q13487 334 aa13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 OSBPL5Q9H0X9 879 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 AATFQ9NY61 560 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 NDUFB9Q9Y6M9 179 aa13.64□□□□□ -0.23
TRAPPC4-204ENST00000524797 MYH7P12883 1935 aa13.63□□□□□ -0.23
TRAPPC4-204ENST00000524797 BAG3O95817 575 aa13.63□□□□□ -0.23
TRAPPC4-204ENST00000524797 PRKCSHP14314 528 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC4-204ENST00000524797 PKN2Q16513 984 aaKnown RBP13.63□□□□□ -0.23
TRAPPC4-204ENST00000524797 SCYL3Q8IZE3 742 aa13.63□□□□□ -0.23
TRAPPC4-204ENST00000524797 CLASRPQ8N2M8 674 aaKnown RBP13.63□□□□□ -0.23
TRAPPC4-204ENST00000524797 KCNH4Q9UQ05 1017 aa13.63□□□□□ -0.23
TRAPPC4-204ENST00000524797 BTBD19C9JJ37 291 aa13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 TBC1D12O60347 775 aa13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 PLCG2P16885 1265 aa13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 CYP7A1P22680 504 aa13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 TAF1CQ15572 869 aaPredicted RBP13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 ANTXR1Q9H6X2 564 aa13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 ZCCHC17Q9NP64 241 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 ZSWIM8A7E2V4 1837 aa13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 IDH1O75874 414 aaKnown RBP13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 ZFYVE28Q9HCC9 887 aa13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 NAV1Q8NEY1 1877 aa13.62□□□□□ -0.23
TRAPPC4-204ENST00000524797 IFIT2P09913 472 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-204ENST00000524797 DYNLL1P63167 89 aaKnown RBP13.61□□□□□ -0.23
TRAPPC4-204ENST00000524797 CD99L2Q8TCZ2 262 aa13.61□□□□□ -0.23
TRAPPC4-204ENST00000524797 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.61□□□□□ -0.23
TRAPPC4-204ENST00000524797 ERO1AQ96HE7 468 aa13.61□□□□□ -0.23
TRAPPC4-204ENST00000524797 PICK1Q9NRD5 415 aa13.61□□□□□ -0.23
TRAPPC4-204ENST00000524797 FAM196BA6NMK8 535 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 CTNND1O60716 968 aaKnown RBP13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 PTPRAP18433 802 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 MOGSQ13724 837 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 FBXO46Q6PJ61 603 aaPredicted RBP13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 MAPKAPK5Q8IW41 473 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 MAGEB6Q8N7X4 407 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 TGFBRAP1Q8WUH2 860 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 HPS5Q9UPZ3 1129 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 FLT1P17948 1338 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 DDX60LQ5H9U9 1706 aaKnown RBP13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 CXCL11O14625 94 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 SP3Q02447 781 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 MAP3K12Q12852 859 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 ANKRD23Q86SG2 305 aa13.6□□□□□ -0.23
TRAPPC4-204ENST00000524797 LOC285556D6RIA3 1793 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms