RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SMARCA4P51532 1647 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 ARNTP27540 789 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 GSTT1P30711 240 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 FMR1Q06787 632 aaKnown RBP eCLIP5.39□□□□□ -1.552e-19■□□□□ 8.5
CSDE1-208ENST00000524652 ZNF252P-AS1Q0IIN9 211 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 CDK5R2Q13319 367 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 TTLL4Q14679 1199 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 KCNB2Q92953 911 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 LGR6Q9HBX8 967 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 CACNA2D2Q9NY47 1150 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 PPM1HQ9ULR3 514 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 SLC5A6Q9Y289 635 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 AKAP2Q9Y2D5 859 aa5.39□□□□□ -1.55
CSDE1-208ENST00000524652 CC2D2AQ9P2K1 1620 aa5.38□□□□□ -1.55
CSDE1-208ENST00000524652 FAM87AP0C7U9 286 aa5.38□□□□□ -1.55
CSDE1-208ENST00000524652 HCLS1P14317 486 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-208ENST00000524652 ERVK-24P63145 666 aa5.38□□□□□ -1.55
CSDE1-208ENST00000524652 ZC3H12AQ5D1E8 599 aaKnown RBP5.38□□□□□ -1.55
CSDE1-208ENST00000524652 ZSCAN29Q8IWY8 852 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-208ENST00000524652 STK35Q8TDR2 534 aa5.38□□□□□ -1.55
CSDE1-208ENST00000524652 ANKRD24Q8TF21 1146 aa5.38□□□□□ -1.55
CSDE1-208ENST00000524652 BCL7CQ8WUZ0 217 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-208ENST00000524652 NECAB3Q96P71 396 aaPredicted RBP5.38□□□□□ -1.55
CSDE1-208ENST00000524652 MKNK2Q9HBH9 465 aa5.38□□□□□ -1.55
CSDE1-208ENST00000524652 PCOLCE2Q9UKZ9 415 aa5.38□□□□□ -1.55
CSDE1-208ENST00000524652 GIPC1O14908 333 aa5.37□□□□□ -1.55
CSDE1-208ENST00000524652 MAP1SQ66K74 1059 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-208ENST00000524652 SCARA3Q6AZY7 606 aa5.37□□□□□ -1.55
CSDE1-208ENST00000524652 RNF214Q8ND24 703 aa5.37□□□□□ -1.55
CSDE1-208ENST00000524652 NETO1Q8TDF5 533 aa5.37□□□□□ -1.55
CSDE1-208ENST00000524652 ASB16Q96NS5 453 aa5.37□□□□□ -1.55
CSDE1-208ENST00000524652 CEP44Q9C0F1 390 aa5.37□□□□□ -1.55
CSDE1-208ENST00000524652 TIMELESSQ9UNS1 1208 aa5.37□□□□□ -1.55
CSDE1-208ENST00000524652 SAMM50Q9Y512 469 aa5.37□□□□□ -1.55
CSDE1-208ENST00000524652 MROH2BQ7Z745 1585 aa5.37□□□□□ -1.55
CSDE1-208ENST00000524652 ENC1O14682 589 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 RNGTTO60942 597 aaKnown RBP5.36□□□□□ -1.55
CSDE1-208ENST00000524652 TRIM37O94972 964 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 NEFMP07197 916 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 YBX3P16989 372 aaKnown RBP eCLIP5.36□□□□□ -1.552e-24■■□□□ 11.8
CSDE1-208ENST00000524652 JUNBP17275 347 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-208ENST00000524652 ITGB5P18084 799 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 MAPK8P45983 427 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 KCNA1Q09470 495 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 COL19A1Q14993 1142 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 ALG1LQ6GMV1 187 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 WFDC3Q8IUB2 231 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 GPBAR1Q8TDU6 330 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 ISL2Q96A47 359 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 ACSBG1Q96GR2 724 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 DUSP23Q9BVJ7 150 aa5.36□□□□□ -1.55
CSDE1-208ENST00000524652 WIZO95785 1651 aa5.35□□□□□ -1.55
CSDE1-208ENST00000524652 BAZ1AQ9NRL2 1556 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-208ENST00000524652 IFI16Q16666 785 aaKnown RBP5.35□□□□□ -1.55
CSDE1-208ENST00000524652 TPTE2Q6XPS3 522 aa5.35□□□□□ -1.55
CSDE1-208ENST00000524652 PLD6Q8N2A8 252 aaKnown RBP5.35□□□□□ -1.55
CSDE1-208ENST00000524652 ASIC4Q96FT7 647 aa5.35□□□□□ -1.55
CSDE1-208ENST00000524652 CBX8Q9HC52 389 aa5.35□□□□□ -1.55
CSDE1-208ENST00000524652 IVNS1ABPQ9Y6Y0 642 aa5.35□□□□□ -1.55
CSDE1-208ENST00000524652 CEACAM5P06731 702 aa5.34□□□□□ -1.55
CSDE1-208ENST00000524652 BMP6P22004 513 aa5.34□□□□□ -1.55
CSDE1-208ENST00000524652 ATP2B2Q01814 1243 aa5.34□□□□□ -1.55
CSDE1-208ENST00000524652 PRKCQQ04759 706 aa5.34□□□□□ -1.55
CSDE1-208ENST00000524652 PLCL1Q15111 1095 aa5.34□□□□□ -1.55
CSDE1-208ENST00000524652 ZNF574Q6ZN55 896 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-208ENST00000524652 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.34□□□□□ -1.55
CSDE1-208ENST00000524652 FAM181AQ8N9Y4 354 aa5.34□□□□□ -1.55
CSDE1-208ENST00000524652 OSBPL7Q9BZF2 842 aa5.34□□□□□ -1.55
CSDE1-208ENST00000524652 SSU72Q9NP77 194 aaKnown RBP5.34□□□□□ -1.55
CSDE1-208ENST00000524652 VAV3Q9UKW4 847 aa5.34□□□□□ -1.55
CSDE1-208ENST00000524652 SPG7Q9UQ90 795 aa5.34□□□□□ -1.55
CSDE1-208ENST00000524652 BTBD11A6QL63 1104 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 LEFTY1O75610 366 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 NTF4P34130 210 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 OXCT1P55809 520 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 RING1Q06587 406 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 LRRC14Q15048 493 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 LLGL2Q6P1M3 1020 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 SPRED2Q7Z698 418 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 FAM8A1Q9UBU6 413 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 CYP8B1Q9UNU6 501 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 PEG3Q9GZU2 1588 aa5.33□□□□□ -1.56
CSDE1-208ENST00000524652 TMEM265A0A087WTH1 108 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 PATL2C9JE40 543 aaKnown RBP5.32□□□□□ -1.56
CSDE1-208ENST00000524652 FANCGO15287 622 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 FBXO24O75426 580 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 PAGE1O75459 146 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 FUT4P22083 530 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 ZNF792Q3KQV3 632 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 ARHGAP27Q6ZUM4 889 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 TOP6BLQ8N6T0 577 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 KCT2Q8NC54 265 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 HRASLS5Q96KN8 279 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 SETDB2Q96T68 719 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 C12orf49Q9H741 205 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 U3KQE9 123 aa5.32□□□□□ -1.56
CSDE1-208ENST00000524652 IGF2BP3O00425 579 aaKnown RBP eCLIP5.31□□□□□ -1.56
CSDE1-208ENST00000524652 BIN1O00499 593 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 PAPLNO95428 1278 aa5.31□□□□□ -1.56
CSDE1-208ENST00000524652 CD8BP10966 210 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms