RNA–Protein interactions for RNA: ENST00000524534.5

PTPRK-217, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 2,441 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-217ENST00000524534 SGMS1Q86VZ5 419 aa13.21□□□□□ -0.3
PTPRK-217ENST00000524534 GPR161Q8N6U8 529 aaKnown RBP13.21□□□□□ -0.3
PTPRK-217ENST00000524534 KRI1Q8N9T8 703 aaKnown RBP13.21□□□□□ -0.3
PTPRK-217ENST00000524534 TC2NQ8N9U0 490 aa13.21□□□□□ -0.3
PTPRK-217ENST00000524534 WDR24Q96S15 920 aa13.21□□□□□ -0.3
PTPRK-217ENST00000524534 MAN1B1Q9UKM7 699 aa13.21□□□□□ -0.3
PTPRK-217ENST00000524534 MRFAP1Q9Y605 127 aa13.21□□□□□ -0.3
PTPRK-217ENST00000524534 UBR2Q8IWV8 1755 aa13.21□□□□□ -0.3
PTPRK-217ENST00000524534 UBN2Q6ZU65 1347 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 FOXN1O15353 648 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 ZBTB43O43298 467 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 SEC31AO94979 1220 aaKnown RBP13.2□□□□□ -0.3
PTPRK-217ENST00000524534 TRIM28Q13263 835 aaKnown RBP13.2□□□□□ -0.3
PTPRK-217ENST00000524534 TCIRG1Q13488 830 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 TRIM29Q14134 588 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 CHRNA2Q15822 529 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 RSRC2Q7L4I2 434 aaKnown RBP13.2□□□□□ -0.3
PTPRK-217ENST00000524534 MICU3Q86XE3 530 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 STK11IPQ8N1F8 1099 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 KIFC2Q96AC6 838 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 STK36Q9NRP7 1315 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 MYH7P12883 1935 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 TBC1D8O95759 1140 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 SARSP49591 514 aaKnown RBP13.2□□□□□ -0.3
PTPRK-217ENST00000524534 GNG11P61952 73 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 SPECC1LQ69YQ0 1117 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 CC2D1AQ6P1N0 951 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-217ENST00000524534 ENOX1Q8TC92 643 aaKnown RBP13.2□□□□□ -0.3
PTPRK-217ENST00000524534 ZNF512BQ96KM6 892 aaPredicted RBP13.2□□□□□ -0.3
PTPRK-217ENST00000524534 LY9Q9HBG7 655 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 HOOK1Q9UJC3 728 aaKnown RBP13.2□□□□□ -0.3
PTPRK-217ENST00000524534 RIC1Q4ADV7 1423 aa13.2□□□□□ -0.3
PTPRK-217ENST00000524534 B4E1Z4 1266 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 ERVV-2B6SEH9 535 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 SASH3O75995 380 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 PCCAP05165 728 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-217ENST00000524534 FMR1Q06787 632 aaKnown RBP eCLIP13.19□□□□□ -0.3
PTPRK-217ENST00000524534 UBE3CQ15386 1083 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 PROSER2Q86WR7 435 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-217ENST00000524534 MLKLQ8NB16 471 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 ECM29Q5VYK3 1845 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 GOLGA8AA7E2F4 631 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 PPP2R3AQ06190 1150 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 POSTNQ15063 836 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 TEX35Q5T0J7 233 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 SLC9C2Q5TAH2 1124 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 NOSTRINQ8IVI9 506 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 FAM177A1Q8N128 213 aaPredicted RBP13.19□□□□□ -0.3
PTPRK-217ENST00000524534 EPC1Q9H2F5 836 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 RIPOR2Q9Y4F9 1068 aa13.19□□□□□ -0.3
PTPRK-217ENST00000524534 FMNL1O95466 1100 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-217ENST00000524534 PTPREP23469 700 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 TOB1P50616 345 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-217ENST00000524534 IFIT5Q13325 482 aaKnown RBP13.18□□□□□ -0.3
PTPRK-217ENST00000524534 MORC3Q14149 939 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 TTF1Q15361 905 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-217ENST00000524534 TAF7LQ5H9L4 462 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 PDILTQ8N807 584 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 CABLES1Q8TDN4 633 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 DACH1Q9UI36 760 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 FBXO2Q9UK22 296 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-217ENST00000524534 NFE2L3Q9Y4A8 694 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 UBE2Q2LH0YL09 131 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 LIFRP42702 1097 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 ADKP55263 362 aaKnown RBP13.18□□□□□ -0.3
PTPRK-217ENST00000524534 SSRP1Q08945 709 aaKnown RBP13.18□□□□□ -0.3
PTPRK-217ENST00000524534 SPECC1Q5M775 1068 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 RABGGTAQ92696 567 aa13.18□□□□□ -0.3
PTPRK-217ENST00000524534 CCDC85AQ96PX6 553 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-217ENST00000524534 PIH1D3Q9NQM4 214 aaKnown RBP13.18□□□□□ -0.3
PTPRK-217ENST00000524534 AKAP11Q9UKA4 1901 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 PRR29P0C7W0 189 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 CDK11BP21127 795 aaKnown RBP13.17□□□□□ -0.3
PTPRK-217ENST00000524534 NR1I3Q14994 352 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 ALX1Q15699 326 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 HSP90AA4PQ58FG1 418 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 TMEM67Q5HYA8 995 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 NFXL1Q6ZNB6 911 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 TRIML1Q8N9V2 468 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 FAM89AQ96GI7 184 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 MED15Q96RN5 788 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 MYL10Q9BUA6 226 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 SLC26A6Q9BXS9 759 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 NID2Q14112 1375 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 TNS2Q63HR2 1409 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 MMP1P03956 469 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 APPP05067 770 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 IFNAR1P17181 557 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 GRIN1Q05586 938 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 METTL24Q5JXM2 366 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 NUTM2AQ8IVF1 878 aaPredicted RBP13.17□□□□□ -0.3
PTPRK-217ENST00000524534 ZNF579Q8NAF0 562 aaKnown RBP13.17□□□□□ -0.3
PTPRK-217ENST00000524534 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
PTPRK-217ENST00000524534 WASF1Q92558 559 aa13.17□□□□□ -0.3
PTPRK-217ENST00000524534 DDX17Q92841 729 aaKnown RBP13.17□□□□□ -0.3
PTPRK-217ENST00000524534 PARD6BQ9BYG5 372 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms