RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 AKAP4Q5JQC9 854 aa9.15□□□□□ -0.94
SKP1-213ENST00000524288 ZAR1Q86SH2 424 aa9.15□□□□□ -0.94
SKP1-213ENST00000524288 FBXL6Q8N531 539 aa9.15□□□□□ -0.94
SKP1-213ENST00000524288 TGIF2Q9GZN2 237 aa9.15□□□□□ -0.94
SKP1-213ENST00000524288 PRKAG2Q9UGJ0 569 aa9.15□□□□□ -0.94
SKP1-213ENST00000524288 USP31Q70CQ4 1352 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 AOC2O75106 756 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 FBXO24O75426 580 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 FOSL1P15407 271 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 RACK1P63244 317 aaKnown RBP9.14□□□□□ -0.95
SKP1-213ENST00000524288 PDE3AQ14432 1141 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 MCTP1Q6DN14 999 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 DTHD1Q6ZMT9 781 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 HS2ST1Q7LGA3 356 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 DYMQ7RTS9 669 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 USP48Q86UV5 1035 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 TBC1D32Q96NH3 1257 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 WDR18Q9BV38 432 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 ACSS3Q9H6R3 686 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 AP4E1Q9UPM8 1137 aa9.14□□□□□ -0.95
SKP1-213ENST00000524288 ECEL1O95672 775 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 WNT11O96014 354 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 CYP27A1Q02318 531 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 PPP2R3AQ06190 1150 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 DRC1Q96MC2 740 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 TINF2Q9BSI4 451 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 SRCIN1Q9C0H9 1055 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 SEMA6CQ9H3T2 930 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 COPRSQ9NQ92 184 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 KRT82Q9NSB4 513 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 AKAP2Q9Y2D5 859 aa9.13□□□□□ -0.95
SKP1-213ENST00000524288 COL17A1Q9UMD9 1497 aaPredicted RBP9.13□□□□□ -0.95
SKP1-213ENST00000524288 RAB6AP20340 208 aa9.12□□□□□ -0.95
SKP1-213ENST00000524288 GSTT1P30711 240 aa9.12□□□□□ -0.95
SKP1-213ENST00000524288 FAAP100Q0VG06 881 aa9.12□□□□□ -0.95
SKP1-213ENST00000524288 FAM105AQ9NUU6 356 aa9.12□□□□□ -0.95
SKP1-213ENST00000524288 NFICP08651 508 aa9.11□□□□□ -0.95
SKP1-213ENST00000524288 ASPAP45381 313 aa9.11□□□□□ -0.95
SKP1-213ENST00000524288 IRAK1P51617 712 aa9.11□□□□□ -0.95
SKP1-213ENST00000524288 MSMPQ1L6U9 139 aa9.11□□□□□ -0.95
SKP1-213ENST00000524288 C3orf58Q8NDZ4 430 aa9.11□□□□□ -0.95
SKP1-213ENST00000524288 GATA6Q92908 595 aa9.11□□□□□ -0.95
SKP1-213ENST00000524288 TMEM39AQ9NV64 488 aa9.11□□□□□ -0.95
SKP1-213ENST00000524288 DDX41Q9UJV9 622 aaKnown RBP9.11□□□□□ -0.95
SKP1-213ENST00000524288 OAS3Q9Y6K5 1087 aaKnown RBP9.11□□□□□ -0.95
SKP1-213ENST00000524288 SLFN14P0C7P3 912 aa9.1□□□□□ -0.95
SKP1-213ENST00000524288 HOXA10P31260 410 aaPredicted RBP9.1□□□□□ -0.95
SKP1-213ENST00000524288 PRNPP04156 253 aa9.09□□□□□ -0.95
SKP1-213ENST00000524288 GSTP1P09211 210 aaKnown RBP9.09□□□□□ -0.95
SKP1-213ENST00000524288 ADMP35318 185 aa9.09□□□□□ -0.95
SKP1-213ENST00000524288 ST13P50502 369 aaKnown RBP9.09□□□□□ -0.95
SKP1-213ENST00000524288 MAP3K11Q16584 847 aa9.09□□□□□ -0.95
SKP1-213ENST00000524288 DUSP27Q5VZP5 1158 aa9.09□□□□□ -0.95
SKP1-213ENST00000524288 TPTE2Q6XPS3 522 aa9.09□□□□□ -0.95
SKP1-213ENST00000524288 ZNF654Q8IZM8 581 aa9.09□□□□□ -0.95
SKP1-213ENST00000524288 ATXN3LQ9H3M9 355 aa9.09□□□□□ -0.95
SKP1-213ENST00000524288 CCDC86Q9H6F5 360 aaKnown RBP9.09□□□□□ -0.95
SKP1-213ENST00000524288 GPN3Q9UHW5 284 aaPredicted RBP9.09□□□□□ -0.95
SKP1-213ENST00000524288 INPP5FQ9Y2H2 1132 aa9.09□□□□□ -0.95
SKP1-213ENST00000524288 CYP26A1O43174 497 aa9.08□□□□□ -0.96
SKP1-213ENST00000524288 ADAMTS4O75173 837 aa9.08□□□□□ -0.96
SKP1-213ENST00000524288 DNAJA1P31689 397 aaKnown RBP9.08□□□□□ -0.96
SKP1-213ENST00000524288 CCDC85BQ15834 202 aaPredicted RBP9.08□□□□□ -0.96
SKP1-213ENST00000524288 KIF4BQ2VIQ3 1234 aa9.08□□□□□ -0.96
SKP1-213ENST00000524288 SEZ6L2Q6UXD5 910 aa9.08□□□□□ -0.96
SKP1-213ENST00000524288 TANGO6Q9C0B7 1094 aa9.08□□□□□ -0.96
SKP1-213ENST00000524288 KBTBD4Q9NVX7 518 aa9.08□□□□□ -0.96
SKP1-213ENST00000524288 CRIM1Q9NZV1 1036 aa9.08□□□□□ -0.96
SKP1-213ENST00000524288 ANGEL1Q9UNK9 670 aaKnown RBP9.08□□□□□ -0.96
SKP1-213ENST00000524288 TMPRSS2O15393 492 aa9.07□□□□□ -0.96
SKP1-213ENST00000524288 ID3Q02535 119 aa9.07□□□□□ -0.96
SKP1-213ENST00000524288 SF3A1Q15459 793 aaKnown RBP9.07□□□□□ -0.96
SKP1-213ENST00000524288 VSIG10LQ86VR7 867 aa9.07□□□□□ -0.96
SKP1-213ENST00000524288 PPP1R9AQ9ULJ8 1098 aa9.07□□□□□ -0.96
SKP1-213ENST00000524288 LIG1P18858 919 aa9.06□□□□□ -0.96
SKP1-213ENST00000524288 ZNF157P51786 506 aaPredicted RBP9.06□□□□□ -0.96
SKP1-213ENST00000524288 ERMP1Q7Z2K6 904 aa9.06□□□□□ -0.96
SKP1-213ENST00000524288 SHISA5Q8N114 240 aa9.06□□□□□ -0.96
SKP1-213ENST00000524288 PIDD1Q9HB75 910 aa9.06□□□□□ -0.96
SKP1-213ENST00000524288 C1GALT1Q9NS00 363 aa9.06□□□□□ -0.96
SKP1-213ENST00000524288 BSDC1Q9NW68 430 aaPredicted RBP9.06□□□□□ -0.96
SKP1-213ENST00000524288 DAGLAQ9Y4D2 1042 aa9.06□□□□□ -0.96
SKP1-213ENST00000524288 FAM170BA6NMN3 283 aa9.05□□□□□ -0.96
SKP1-213ENST00000524288 MINDY4BA8MYZ0 360 aa9.05□□□□□ -0.96
SKP1-213ENST00000524288 ZNF862O60290 1169 aa9.05□□□□□ -0.96
SKP1-213ENST00000524288 CELA3AP09093 270 aa9.05□□□□□ -0.96
SKP1-213ENST00000524288 PDZD3Q86UT5 571 aa9.05□□□□□ -0.96
SKP1-213ENST00000524288 FBXL18Q96ME1 805 aa9.05□□□□□ -0.96
SKP1-213ENST00000524288 EMILIN2Q9BXX0 1053 aa9.05□□□□□ -0.96
SKP1-213ENST00000524288 PCDHGC5Q9Y5F6 944 aa9.05□□□□□ -0.96
SKP1-213ENST00000524288 PAX4O43316 350 aa9.04□□□□□ -0.96
SKP1-213ENST00000524288 NME2P22392 152 aa9.04□□□□□ -0.96
SKP1-213ENST00000524288 PAK2Q13177 524 aa9.04□□□□□ -0.96
SKP1-213ENST00000524288 GNL2Q13823 731 aaKnown RBP9.04□□□□□ -0.96
SKP1-213ENST00000524288 OGFOD3Q6PK18 319 aa9.04□□□□□ -0.96
SKP1-213ENST00000524288 ZNF765Q7L2R6 523 aa9.04□□□□□ -0.96
SKP1-213ENST00000524288 SULF2Q8IWU5 870 aa9.04□□□□□ -0.96
SKP1-213ENST00000524288 WDR89Q96FK6 387 aaPredicted RBP9.04□□□□□ -0.96
SKP1-213ENST00000524288 FANCD2OSQ96PS1 177 aa9.04□□□□□ -0.96
SKP1-213ENST00000524288 KRTAP9-2Q9BYQ4 174 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms