RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 SETSIPP0DME0 302 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 RPS6KB1P23443 525 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 GJB2P29033 226 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 MATR3P43243 847 aaKnown RBP eCLIP2.95□□□□□ -1.944e-7■■■■□ 19.4
PCM1-222ENST00000524226 GSDMDP57764 484 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 TIMM10P62072 90 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 STK3Q13188 491 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 IFI16Q16666 785 aaKnown RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 ZSCAN30Q86W11 494 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 MARCH10Q8NA82 808 aaPredicted RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 DDX23Q9BUQ8 820 aaKnown RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 DSCC1Q9BVC3 393 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 PLVAPQ9BX97 442 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 TM6SF1Q9BZW5 370 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 ANKRD2Q9GZV1 360 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 NSRP1Q9H0G5 558 aaKnown RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 NUP62CLQ9H1M0 184 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 SNRKQ9NRH2 765 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 LRP2BPQ9P2M1 347 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 NUP188Q5SRE5 1749 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 PABPN1LA6NDY0 278 aaKnown RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 CCDC69A6NI79 296 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 ZNF213O14771 459 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 RIMBP2O15034 1052 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 PRPF40AO75400 957 aaKnown RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 HCLS1P14317 486 aaPredicted RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 SFPQP23246 707 aaKnown RBP eCLIP2.95□□□□□ -1.94
PCM1-222ENST00000524226 EIF5P55010 431 aaKnown RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 PTH1RQ03431 593 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 CETN1Q12798 172 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 DPP8Q6V1X1 898 aaPredicted RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 LRP10Q7Z4F1 713 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 FAM114A1Q8IWE2 563 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 CCDC150Q8NCX0 1101 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 CCDC97Q96F63 343 aaPredicted RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 KAZALD1Q96I82 304 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 TSNARE1Q96NA8 513 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 KIF2CQ99661 725 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 PUS3Q9BZE2 481 aaKnown RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 STMN4Q9H169 189 aaPredicted RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 ANTXR1Q9H6X2 564 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 FAM114A2Q9NRY5 505 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 PALD1Q9ULE6 856 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 SHANK3Q9BYB0 1731 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 TOGARAM1Q9Y4F4 1720 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 UQCRHLA0A096LP55 91 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 ZEB2O60315 1214 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 BAG4O95429 457 aaKnown RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 IVLP07476 585 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 UQCRHP07919 91 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 ME1P48163 572 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 CASP7P55210 303 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 SEPT6Q14141 434 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 PLS1Q14651 629 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 CTR9Q6PD62 1173 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 CLEC4GQ6UXB4 293 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 ATG9AQ7Z3C6 839 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 ZBTB33Q86T24 672 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 ALS2CR12Q96Q35 445 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 GTPBP4Q9BZE4 634 aaKnown RBP2.95□□□□□ -1.94
PCM1-222ENST00000524226 CENPHQ9H3R5 247 aa2.95□□□□□ -1.94
PCM1-222ENST00000524226 CCDC196A0A1B0GTZ2 297 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 FSD2A1L4K1 749 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 BAG3O95817 575 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 TUBBP07437 444 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 CCDC172P0C7W6 258 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 GNAT2P19087 354 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 TDO2P48775 406 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 IFFO1Q0D2I5 559 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 LARP1BQ659C4 914 aaKnown RBP2.94□□□□□ -1.94
PCM1-222ENST00000524226 ELMSAN1Q6PJG2 1045 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 CCDC129Q6ZRS4 1044 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 ZNF34Q8IZ26 560 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 TTLL11Q8NHH1 800 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 NCOA7Q8NI08 942 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 SMCR8Q8TEV9 937 aaPredicted RBP2.94□□□□□ -1.94
PCM1-222ENST00000524226 MAP4K1Q92918 833 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 TTC14Q96N46 770 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 LRRC27Q9C0I9 530 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 TTC12Q9H892 705 aaPredicted RBP2.94□□□□□ -1.94
PCM1-222ENST00000524226 GRPEL1Q9HAV7 217 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 ANO10Q9NW15 660 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 SLIT2O94813 1529 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 NRAPQ86VF7 1730 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 ESPNB1AK53 854 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 STX6O43752 255 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 CD2BP2O95400 341 aaKnown RBP2.94□□□□□ -1.94
PCM1-222ENST00000524226 CSF1RP07333 972 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 PTPN14Q15678 1187 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 MAP3K11Q16584 847 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 SPOUT1Q5T280 376 aaKnown RBP2.94□□□□□ -1.94
PCM1-222ENST00000524226 SLC9C2Q5TAH2 1124 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 SUSD4Q5VX71 490 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 STXBP4Q6ZWJ1 553 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 NBPF11Q86T75 865 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 SPATA5Q8NB90 893 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 RNF214Q8ND24 703 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 APPBP2Q92624 585 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 SPATA32Q96LK8 384 aa2.94□□□□□ -1.94
PCM1-222ENST00000524226 SCAND2PQ9GZW5 306 aaPredicted RBP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms