RNA–Protein interactions for RNA: ENST00000523931.1

NDRG1-228, Transcript of N-myc downstream regulated 1, humanhuman

TSL 3

Gene NDRG1, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-228ENST00000523931 E9PSI1 815 aa12.51□□□□□ -0.41
NDRG1-228ENST00000523931 H7C1W4 665 aa12.51□□□□□ -0.41
NDRG1-228ENST00000523931 PLIN1O60240 522 aa12.51□□□□□ -0.41
NDRG1-228ENST00000523931 COL6A1P12109 1028 aa12.51□□□□□ -0.41
NDRG1-228ENST00000523931 HDLBPQ00341 1268 aaKnown RBP12.51□□□□□ -0.41
NDRG1-228ENST00000523931 NOL9Q5SY16 702 aaKnown RBP12.51□□□□□ -0.41
NDRG1-228ENST00000523931 KSR2Q6VAB6 950 aa12.51□□□□□ -0.41
NDRG1-228ENST00000523931 PI4KAP1Q8N8J0 262 aa12.51□□□□□ -0.41
NDRG1-228ENST00000523931 PLA2G12BQ9BX93 195 aa12.51□□□□□ -0.41
NDRG1-228ENST00000523931 SLC45A1Q9Y2W3 748 aa12.51□□□□□ -0.41
NDRG1-228ENST00000523931 CDH23Q9H251 3354 aa12.5□□□□□ -0.41
NDRG1-228ENST00000523931 MUC6Q6W4X9 2439 aa12.5□□□□□ -0.41
NDRG1-228ENST00000523931 A0A0G2JLL6 359 aaPredicted RBP12.5□□□□□ -0.41
NDRG1-228ENST00000523931 CSF1RP07333 972 aa12.5□□□□□ -0.41
NDRG1-228ENST00000523931 HNRNPUQ00839 825 aaKnown RBP eCLIP12.5□□□□□ -0.41
NDRG1-228ENST00000523931 GRIK5Q16478 980 aa12.5□□□□□ -0.41
NDRG1-228ENST00000523931 PRRT2Q7Z6L0 340 aaPredicted RBP12.5□□□□□ -0.41
NDRG1-228ENST00000523931 USP38Q8NB14 1042 aa12.5□□□□□ -0.41
NDRG1-228ENST00000523931 STK31Q9BXU1 1019 aa12.5□□□□□ -0.41
NDRG1-228ENST00000523931 PRKAG2Q9UGJ0 569 aa12.5□□□□□ -0.41
NDRG1-228ENST00000523931 ZNF112Q9UJU3 913 aa12.5□□□□□ -0.41
NDRG1-228ENST00000523931 DNAH12Q6ZR08 3092 aa12.5□□□□□ -0.41
NDRG1-228ENST00000523931 PRKAR2AP13861 404 aaKnown RBP12.49□□□□□ -0.41
NDRG1-228ENST00000523931 HIBADHP31937 336 aaKnown RBP12.49□□□□□ -0.41
NDRG1-228ENST00000523931 GYG1P46976 350 aa12.49□□□□□ -0.41
NDRG1-228ENST00000523931 SMAD3P84022 425 aaKnown RBP12.49□□□□□ -0.41
NDRG1-228ENST00000523931 SLFN5Q08AF3 891 aa12.49□□□□□ -0.41
NDRG1-228ENST00000523931 IFIT5Q13325 482 aaKnown RBP12.49□□□□□ -0.41
NDRG1-228ENST00000523931 SHHQ15465 462 aa12.49□□□□□ -0.41
NDRG1-228ENST00000523931 FAM110CQ1W6H9 321 aa12.49□□□□□ -0.41
NDRG1-228ENST00000523931 ZDHHC15Q96MV8 337 aa12.49□□□□□ -0.41
NDRG1-228ENST00000523931 PICK1Q9NRD5 415 aa12.49□□□□□ -0.41
NDRG1-228ENST00000523931 CHMP3Q9Y3E7 222 aa12.49□□□□□ -0.41
NDRG1-228ENST00000523931 ZHX2Q9Y6X8 837 aa12.49□□□□□ -0.41
NDRG1-228ENST00000523931 SYNGAP1Q96PV0 1343 aa12.48□□□□□ -0.41
NDRG1-228ENST00000523931 MYO9BQ13459 2157 aa12.48□□□□□ -0.41
NDRG1-228ENST00000523931 VAMP4O75379 141 aa12.48□□□□□ -0.41
NDRG1-228ENST00000523931 CHAF1AQ13111 956 aaPredicted RBP12.48□□□□□ -0.41
NDRG1-228ENST00000523931 ADAMTS19Q8TE59 1207 aa12.48□□□□□ -0.41
NDRG1-228ENST00000523931 TRIB2Q92519 343 aa12.48□□□□□ -0.41
NDRG1-228ENST00000523931 CDCA7LQ96GN5 454 aa12.48□□□□□ -0.41
NDRG1-228ENST00000523931 GCKRQ14397 625 aa12.47□□□□□ -0.41
NDRG1-228ENST00000523931 C9orf50Q5SZB4 431 aa12.47□□□□□ -0.41
NDRG1-228ENST00000523931 APOBEC3HQ6NTF7 200 aaKnown RBP12.47□□□□□ -0.41
NDRG1-228ENST00000523931 TBC1D22AQ8WUA7 517 aa12.47□□□□□ -0.41
NDRG1-228ENST00000523931 FAM151AQ8WW52 585 aa12.47□□□□□ -0.41
NDRG1-228ENST00000523931 IQSEC3Q9UPP2 1182 aaPredicted RBP12.47□□□□□ -0.41
NDRG1-228ENST00000523931 PTPRFP10586 1907 aa12.47□□□□□ -0.41
NDRG1-228ENST00000523931 MAST2Q6P0Q8 1798 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 FRAT2O75474 233 aaPredicted RBP12.46□□□□□ -0.41
NDRG1-228ENST00000523931 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 TCP10Q12799 353 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 TAF7LQ5H9L4 462 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 MAP3K21Q5TCX8 1036 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 VPS37DQ86XT2 251 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 SCYL3Q8IZE3 742 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 IL27Q8NEV9 243 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 FAM84BQ96KN1 310 aaPredicted RBP12.46□□□□□ -0.41
NDRG1-228ENST00000523931 UHRF1Q96T88 793 aaPredicted RBP12.46□□□□□ -0.41
NDRG1-228ENST00000523931 C1QTNF1Q9BXJ1 281 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 CNNM1Q9NRU3 951 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 GJD2Q9UKL4 321 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 HCN4Q9Y3Q4 1203 aa12.46□□□□□ -0.41
NDRG1-228ENST00000523931 LTBP2Q14767 1821 aa12.46□□□□□ -0.42
NDRG1-228ENST00000523931 MAST3O60307 1309 aa12.45□□□□□ -0.42
NDRG1-228ENST00000523931 TRIM75PA6NK02 468 aa12.45□□□□□ -0.42
NDRG1-228ENST00000523931 PTPRAP18433 802 aa12.45□□□□□ -0.42
NDRG1-228ENST00000523931 CYP2B6P20813 491 aa12.45□□□□□ -0.42
NDRG1-228ENST00000523931 CASP7P55210 303 aa12.45□□□□□ -0.42
NDRG1-228ENST00000523931 UBE4AQ14139 1066 aa12.45□□□□□ -0.42
NDRG1-228ENST00000523931 LDHAL6AQ6ZMR3 332 aa12.45□□□□□ -0.42
NDRG1-228ENST00000523931 TRMT2AQ8IZ69 625 aaKnown RBP12.45□□□□□ -0.42
NDRG1-228ENST00000523931 ATXN2LQ8WWM7 1075 aaKnown RBP12.45□□□□□ -0.42
NDRG1-228ENST00000523931 SENP6Q9GZR1 1112 aaPredicted RBP12.45□□□□□ -0.42
NDRG1-228ENST00000523931 AGTPBP1Q9UPW5 1226 aa12.45□□□□□ -0.42
NDRG1-228ENST00000523931 AFG3L2Q9Y4W6 797 aa12.45□□□□□ -0.42
NDRG1-228ENST00000523931 ZBED9Q6R2W3 1325 aa12.44□□□□□ -0.42
NDRG1-228ENST00000523931 GCLCP48506 637 aaPredicted RBP12.44□□□□□ -0.42
NDRG1-228ENST00000523931 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
NDRG1-228ENST00000523931 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
NDRG1-228ENST00000523931 ASB2Q96Q27 587 aa12.44□□□□□ -0.42
NDRG1-228ENST00000523931 MRIQ9BWK5 157 aa12.44□□□□□ -0.42
NDRG1-228ENST00000523931 THEGQ9P2T0 379 aa12.44□□□□□ -0.42
NDRG1-228ENST00000523931 ARIH1Q9Y4X5 557 aaPredicted RBP12.44□□□□□ -0.42
NDRG1-228ENST00000523931 ZKSCAN1P17029 563 aaPredicted RBP12.43□□□□□ -0.42
NDRG1-228ENST00000523931 GRIN2CQ14957 1233 aa12.43□□□□□ -0.42
NDRG1-228ENST00000523931 CCDC57Q2TAC2 916 aa12.43□□□□□ -0.42
NDRG1-228ENST00000523931 LHX8Q68G74 356 aa12.43□□□□□ -0.42
NDRG1-228ENST00000523931 HHIPL2Q6UWX4 724 aa12.43□□□□□ -0.42
NDRG1-228ENST00000523931 PPM1EQ8WY54 764 aa12.43□□□□□ -0.42
NDRG1-228ENST00000523931 ZNF594Q96JF6 807 aaPredicted RBP12.43□□□□□ -0.42
NDRG1-228ENST00000523931 CACNA1AO00555 2505 aa12.42□□□□□ -0.42
NDRG1-228ENST00000523931 PLXNB2O15031 1838 aa12.42□□□□□ -0.42
NDRG1-228ENST00000523931 CCND3P30281 292 aaPredicted RBP12.42□□□□□ -0.42
NDRG1-228ENST00000523931 RTP1P59025 263 aa12.42□□□□□ -0.42
NDRG1-228ENST00000523931 MRPS5P82675 430 aaKnown RBP12.42□□□□□ -0.42
NDRG1-228ENST00000523931 CACNB2Q08289 660 aaPredicted RBP12.42□□□□□ -0.42
NDRG1-228ENST00000523931 NFIAQ12857 509 aa12.42□□□□□ -0.42
NDRG1-228ENST00000523931 TREML2Q5T2D2 321 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms