RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 HDLBPQ00341 1268 aaKnown RBP9.78□□□□□ -0.84
CPNE3-206ENST00000523469 USP48Q86UV5 1035 aa9.78□□□□□ -0.84
CPNE3-206ENST00000523469 METTL16Q86W50 562 aaKnown RBP9.78□□□□□ -0.84
CPNE3-206ENST00000523469 ATXN3LQ9H3M9 355 aa9.78□□□□□ -0.84
CPNE3-206ENST00000523469 BMP3P12645 472 aa9.77□□□□□ -0.85
CPNE3-206ENST00000523469 TCF3P15923 654 aa9.77□□□□□ -0.85
CPNE3-206ENST00000523469 ASPAP45381 313 aa9.77□□□□□ -0.85
CPNE3-206ENST00000523469 SNAP47Q5SQN1 464 aa9.77□□□□□ -0.85
CPNE3-206ENST00000523469 FAM20CQ8IXL6 584 aa9.77□□□□□ -0.85
CPNE3-206ENST00000523469 JARID2Q92833 1246 aaPredicted RBP9.77□□□□□ -0.85
CPNE3-206ENST00000523469 FANCD2OSQ96PS1 177 aa9.77□□□□□ -0.85
CPNE3-206ENST00000523469 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.76□□□□□ -0.85
CPNE3-206ENST00000523469 EIF4A3P38919 411 aaKnown RBP9.76□□□□□ -0.85
CPNE3-206ENST00000523469 FAM160A1Q05DH4 1040 aa9.76□□□□□ -0.85
CPNE3-206ENST00000523469 HDXQ7Z353 690 aa9.76□□□□□ -0.85
CPNE3-206ENST00000523469 YIPF2Q9BWQ6 316 aa9.76□□□□□ -0.85
CPNE3-206ENST00000523469 KCNQ5Q9NR82 932 aa9.76□□□□□ -0.85
CPNE3-206ENST00000523469 DISC1Q9NRI5 854 aa9.76□□□□□ -0.85
CPNE3-206ENST00000523469 SNCAIPQ9Y6H5 919 aa9.76□□□□□ -0.85
CPNE3-206ENST00000523469 H2AFB1P0C5Y9 115 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 H2AFB2P0C5Z0 115 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 GARTP22102 1010 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 INPP5AQ14642 412 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 SGO2Q562F6 1265 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-206ENST00000523469 BNC2Q6ZN30 1099 aaPredicted RBP9.75□□□□□ -0.85
CPNE3-206ENST00000523469 NT5DC4Q86YG4 428 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 GOLM1Q8NBJ4 401 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 GATAD2BQ8WXI9 593 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 ELMO3Q96BJ8 720 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 PLPPR2Q96GM1 343 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 PIDD1Q9HB75 910 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 FAM105AQ9NUU6 356 aa9.75□□□□□ -0.85
CPNE3-206ENST00000523469 SUPT16HQ9Y5B9 1047 aaKnown RBP9.75□□□□□ -0.85
CPNE3-206ENST00000523469 FAM221AA4D161 298 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 DCDC2CA8MYV0 355 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 F13A1P00488 732 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 MAP4P27816 1152 aaKnown RBP9.74□□□□□ -0.85
CPNE3-206ENST00000523469 RING1Q06587 406 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 ZNF394Q53GI3 561 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 WIPI1Q5MNZ9 446 aaPredicted RBP9.74□□□□□ -0.85
CPNE3-206ENST00000523469 C9orf131Q5VYM1 1079 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 CDPF1Q6NVV7 123 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 FBXL19Q6PCT2 694 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 LRFN4Q6PJG9 635 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 PRR23CQ6ZRP0 262 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 ACSS3Q9H6R3 686 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 ADAMTS1Q9UHI8 967 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 DDX41Q9UJV9 622 aaKnown RBP9.74□□□□□ -0.85
CPNE3-206ENST00000523469 RAXQ9Y2V3 346 aa9.74□□□□□ -0.85
CPNE3-206ENST00000523469 CILPO75339 1184 aa9.73□□□□□ -0.85
CPNE3-206ENST00000523469 RPL6Q02878 288 aaKnown RBP9.73□□□□□ -0.85
CPNE3-206ENST00000523469 TTLL4Q14679 1199 aa9.73□□□□□ -0.85
CPNE3-206ENST00000523469 CYFIP1Q7L576 1253 aa9.73□□□□□ -0.85
CPNE3-206ENST00000523469 C12orf40Q86WS4 652 aa9.73□□□□□ -0.85
CPNE3-206ENST00000523469 CLEC10AQ8IUN9 316 aa9.73□□□□□ -0.85
CPNE3-206ENST00000523469 RNF214Q8ND24 703 aa9.73□□□□□ -0.85
CPNE3-206ENST00000523469 FBLIM1Q8WUP2 373 aa9.73□□□□□ -0.85
CPNE3-206ENST00000523469 ZNF296Q8WUU4 475 aaPredicted RBP9.73□□□□□ -0.85
CPNE3-206ENST00000523469 EZH1Q92800 747 aaPredicted RBP9.73□□□□□ -0.85
CPNE3-206ENST00000523469 KCNF1Q9H3M0 494 aa9.73□□□□□ -0.85
CPNE3-206ENST00000523469 PCDHGB7Q9Y5F8 929 aa9.73□□□□□ -0.85
CPNE3-206ENST00000523469 CSADQ9Y600 493 aa9.73□□□□□ -0.85
CPNE3-206ENST00000523469 FANCGO15287 622 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 GREM1O60565 184 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 BPNT1O95861 308 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 RAB6AP20340 208 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 RXRBP28702 533 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 RSPO4Q2I0M5 234 aaPredicted RBP9.72□□□□□ -0.85
CPNE3-206ENST00000523469 NKAPLQ5M9Q1 402 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 FAM196AQ6ZSG2 479 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 BEND4Q6ZU67 534 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 ZNF654Q8IZM8 581 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 FAM83CQ9BQN1 747 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 PICK1Q9NRD5 415 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 IGSF5Q9NSI5 407 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 STOML1Q9UBI4 398 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 TACC3Q9Y6A5 838 aa9.72□□□□□ -0.85
CPNE3-206ENST00000523469 GFRA2O00451 464 aa9.71□□□□□ -0.86
CPNE3-206ENST00000523469 CDK8P49336 464 aa9.71□□□□□ -0.86
CPNE3-206ENST00000523469 RACK1P63244 317 aaKnown RBP9.71□□□□□ -0.86
CPNE3-206ENST00000523469 PPM1JQ5JR12 505 aa9.71□□□□□ -0.86
CPNE3-206ENST00000523469 KIAA0825Q8IV33 1275 aa9.71□□□□□ -0.86
CPNE3-206ENST00000523469 SPON2Q9BUD6 331 aa9.71□□□□□ -0.86
CPNE3-206ENST00000523469 ROBO2Q9HCK4 1378 aa9.71□□□□□ -0.86
CPNE3-206ENST00000523469 FAM95CA0A1B0GW59 222 aa9.7□□□□□ -0.86
CPNE3-206ENST00000523469 MPP2Q14168 576 aa9.7□□□□□ -0.86
CPNE3-206ENST00000523469 MAP7Q14244 749 aa9.7□□□□□ -0.86
CPNE3-206ENST00000523469 SMYD4Q8IYR2 804 aaPredicted RBP9.7□□□□□ -0.86
CPNE3-206ENST00000523469 SEMA6CQ9H3T2 930 aa9.7□□□□□ -0.86
CPNE3-206ENST00000523469 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.7□□□□□ -0.86
CPNE3-206ENST00000523469 PRAMEF27A3QJZ7 478 aa9.69□□□□□ -0.86
CPNE3-206ENST00000523469 RNGTTO60942 597 aaKnown RBP9.69□□□□□ -0.86
CPNE3-206ENST00000523469 NEFMP07197 916 aa9.69□□□□□ -0.86
CPNE3-206ENST00000523469 NFICP08651 508 aa9.69□□□□□ -0.86
CPNE3-206ENST00000523469 HCLS1P14317 486 aaPredicted RBP9.69□□□□□ -0.86
CPNE3-206ENST00000523469 ZBTB37Q5TC79 503 aa9.69□□□□□ -0.86
CPNE3-206ENST00000523469 PAOXQ6QHF9 649 aa9.69□□□□□ -0.86
CPNE3-206ENST00000523469 NT5C1AQ9BXI3 368 aa9.69□□□□□ -0.86
CPNE3-206ENST00000523469 LRRC3Q9BY71 257 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms