RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 UBE3BQ7Z3V4 1068 aa13.78□□□□□ -0.2
EXTL3-214ENST00000523271 TRMT112Q9UI30 125 aaKnown RBP13.78□□□□□ -0.2
EXTL3-214ENST00000523271 MYD88Q99836 296 aa13.78□□□□□ -0.2
EXTL3-214ENST00000523271 CALUO43852 315 aaPredicted RBP13.78□□□□□ -0.2
EXTL3-214ENST00000523271 TNFAIP3P21580 790 aa13.78□□□□□ -0.2
EXTL3-214ENST00000523271 STK24Q9Y6E0 443 aa13.78□□□□□ -0.2
EXTL3-214ENST00000523271 FGD5Q6ZNL6 1462 aa13.78□□□□□ -0.2
EXTL3-214ENST00000523271 ARHGEF9O43307 516 aa13.77□□□□□ -0.2
EXTL3-214ENST00000523271 RSBN1LQ6PCB5 846 aaPredicted RBP13.77□□□□□ -0.2
EXTL3-214ENST00000523271 CLSTN2Q9H4D0 955 aa13.77□□□□□ -0.2
EXTL3-214ENST00000523271 EFCC1Q9HA90 598 aa13.77□□□□□ -0.2
EXTL3-214ENST00000523271 ZNF277Q9NRM2 450 aaPredicted RBP13.77□□□□□ -0.2
EXTL3-214ENST00000523271 RAD50Q92878 1312 aa13.77□□□□□ -0.2
EXTL3-214ENST00000523271 ESYT2A0FGR8 921 aa13.77□□□□□ -0.2
EXTL3-214ENST00000523271 CCDC138Q96M89 665 aa13.77□□□□□ -0.2
EXTL3-214ENST00000523271 NFE2L2Q16236 605 aa13.77□□□□□ -0.2
EXTL3-214ENST00000523271 PROSER2Q86WR7 435 aaPredicted RBP13.77□□□□□ -0.2
EXTL3-214ENST00000523271 BIRC3Q13489 604 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 LRRC23Q53EV4 343 aaPredicted RBP13.77□□□□□ -0.21
EXTL3-214ENST00000523271 NUP58Q9BVL2 599 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 CCDC68Q9H2F9 335 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 POLE3Q9NRF9 147 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 STX2P32856 288 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 HAUS1Q96CS2 278 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 KRT12Q99456 494 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 RIOK1Q9BRS2 568 aaKnown RBP13.77□□□□□ -0.21
EXTL3-214ENST00000523271 IPO11Q9UI26 975 aaKnown RBP13.77□□□□□ -0.21
EXTL3-214ENST00000523271 SATB2Q9UPW6 733 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 RIPOR2Q9Y4F9 1068 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 NUTM2BA6NNL0 878 aaPredicted RBP13.77□□□□□ -0.21
EXTL3-214ENST00000523271 NUTM2EB1AL46 878 aaPredicted RBP13.77□□□□□ -0.21
EXTL3-214ENST00000523271 TYRO3Q06418 890 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 CFAP221Q4G0U5 840 aa13.77□□□□□ -0.21
EXTL3-214ENST00000523271 ARHGAP5Q13017 1502 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 ZC3H15Q8WU90 426 aaKnown RBP13.76□□□□□ -0.21
EXTL3-214ENST00000523271 DHX58Q96C10 678 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 TBC1D2Q9BYX2 928 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 RABEP2Q9H5N1 569 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 HGSO14964 777 aaPredicted RBP13.76□□□□□ -0.21
EXTL3-214ENST00000523271 LMNAP02545 664 aaKnown RBP13.76□□□□□ -0.21
EXTL3-214ENST00000523271 AKNAD1Q5T1N1 836 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 CNNM4Q6P4Q7 775 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 PDXDC1Q6P996 788 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 EEF1DP29692 281 aaKnown RBP13.76□□□□□ -0.21
EXTL3-214ENST00000523271 PEX19P40855 299 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 ASIC2Q16515 512 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 TRIM55Q9BYV6 548 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 ECHDC1Q9NTX5 307 aa13.76□□□□□ -0.21
EXTL3-214ENST00000523271 COPG1Q9Y678 874 aaKnown RBP13.76□□□□□ -0.21
EXTL3-214ENST00000523271 PPP2R5EQ16537 467 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 TACO1Q9BSH4 297 aaKnown RBP13.75□□□□□ -0.21
EXTL3-214ENST00000523271 POLR3CQ9BUI4 534 aaPredicted RBP13.75□□□□□ -0.21
EXTL3-214ENST00000523271 EXOC7Q9UPT5 735 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 LONP1P36776 959 aaKnown RBP13.75□□□□□ -0.21
EXTL3-214ENST00000523271 CARD10Q9BWT7 1032 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 DNAJC25Q9H1X3 360 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 SPTLC2O15270 562 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 SMARCA5O60264 1052 aaPredicted RBP13.75□□□□□ -0.21
EXTL3-214ENST00000523271 UQCRFS1P1P0C7P4 283 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 KCNH5Q8NCM2 988 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 HOMER3Q9NSC5 361 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 RGS16O15492 202 aaPredicted RBP13.75□□□□□ -0.21
EXTL3-214ENST00000523271 ST5P78524 1137 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 CDK19Q9BWU1 502 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 KLF18A0A0U1RQI7 1052 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 IQUBQ8NA54 791 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 EFHD1Q9BUP0 239 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 CCDC8Q9H0W5 538 aaPredicted RBP13.75□□□□□ -0.21
EXTL3-214ENST00000523271 DCUN1D2Q6PH85 259 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 CTAGE3PQ8IX95 158 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 OGFOD1Q8N543 542 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 USP6NLQ92738 828 aa13.75□□□□□ -0.21
EXTL3-214ENST00000523271 SNCBQ16143 134 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 PRAM1Q96QH2 718 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 CD2APQ9Y5K6 639 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 TMED1Q13445 227 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 IFNKQ9P0W0 207 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 SYNJ2O15056 1496 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 BCRP11274 1271 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 SESN3P58005 492 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 DEUP1Q05D60 604 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 IWS1Q96ST2 819 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 ABCC11Q96J66 1382 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 GNGT2O14610 69 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 ATL3Q6DD88 541 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 NUDCD3Q8IVD9 361 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 RSAD2Q8WXG1 361 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 RTEL1-TNFRSF6BF6WH68 1400 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 MARCKSP29966 332 aaPredicted RBP13.74□□□□□ -0.21
EXTL3-214ENST00000523271 STRN3Q13033 797 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 USP48Q86UV5 1035 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 CCDC105Q8IYK2 499 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 NOC4LQ9BVI4 516 aaKnown RBP13.74□□□□□ -0.21
EXTL3-214ENST00000523271 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
EXTL3-214ENST00000523271 BRAPQ7Z569 592 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 CNPY2Q9Y2B0 182 aa13.74□□□□□ -0.21
EXTL3-214ENST00000523271 ZRANB2O95218 330 aaKnown RBP eCLIP13.73□□□□□ -0.21
EXTL3-214ENST00000523271 PDE6AP16499 860 aa13.73□□□□□ -0.21
EXTL3-214ENST00000523271 SV2BQ7L1I2 683 aa13.73□□□□□ -0.21
EXTL3-214ENST00000523271 PPP1R42Q7Z4L9 355 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms