RNA–Protein interactions for RNA: ENST00000523215.1

ERGIC1-211, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 3,621 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-211ENST00000523215 RAB21Q9UL25 225 aa12.06□□□□□ -0.48
ERGIC1-211ENST00000523215 IRS2Q9Y4H2 1338 aa12.06□□□□□ -0.48
ERGIC1-211ENST00000523215 PTPDC1A2A3K4 754 aa12.06□□□□□ -0.48
ERGIC1-211ENST00000523215 MAP2K7O14733 419 aa12.06□□□□□ -0.48
ERGIC1-211ENST00000523215 LIFRP42702 1097 aa12.06□□□□□ -0.48
ERGIC1-211ENST00000523215 NBPF5PQ86XG9 351 aaPredicted RBP12.06□□□□□ -0.48
ERGIC1-211ENST00000523215 ZNF513Q8N8E2 541 aaPredicted RBP12.06□□□□□ -0.48
ERGIC1-211ENST00000523215 TRIML1Q8N9V2 468 aa12.06□□□□□ -0.48
ERGIC1-211ENST00000523215 SRRTQ9BXP5 876 aaKnown RBP12.06□□□□□ -0.48
ERGIC1-211ENST00000523215 LRRC10BA6NIK2 292 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 COBLL1Q53SF7 1204 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 FERMT3Q86UX7 667 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 NKX2-3Q8TAU0 364 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 TNFRSF25Q93038 417 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 PPP1R13BQ96KQ4 1090 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 USP27XA6NNY8 438 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 M0R2C6 588 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 A1BGP04217 495 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 CCAR1Q8IX12 1150 aaKnown RBP12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 CCDC112Q8NEF3 446 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 ZNF396Q96N95 335 aaPredicted RBP12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 PAG1Q9NWQ8 432 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 PCDH11XQ9BZA7 1347 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 PCDH11YQ9BZA8 1340 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 VPS37CA5D8V6 355 aaPredicted RBP12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 SATB1Q01826 763 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 MAMSTRQ6ZN01 415 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 VSTM4Q8IW00 320 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 ZNF594Q96JF6 807 aaPredicted RBP12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 MED15Q96RN5 788 aa12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 PUS3Q9BZE2 481 aaKnown RBP12.05□□□□□ -0.48
ERGIC1-211ENST00000523215 TADA3O75528 432 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 MAP3K9P80192 1104 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 UBE3CQ15386 1083 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 ZKSCAN8Q15776 578 aaPredicted RBP12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 FOXR2Q6PJQ5 311 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 APBB1IPQ7Z5R6 666 aaPredicted RBP12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 MRPS27Q92552 414 aaKnown RBP12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 SUGT1Q9Y2Z0 365 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 SIPA1L1O43166 1804 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 EYA2O00167 538 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 POLD1P28340 1107 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 CABP4P57796 275 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 TTC5Q8N0Z6 440 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 IGDCC4Q8TDY8 1250 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 PSME4Q14997 1843 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 PCCAP05165 728 aaPredicted RBP12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 BMP6P22004 513 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 CYP2C19P33261 490 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 TIMM10P62072 90 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 LRMPQ12912 555 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 STK3Q13188 491 aa12.04□□□□□ -0.48
ERGIC1-211ENST00000523215 CDKAL1Q5VV42 579 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 C17orf53Q8N3J3 647 aaPredicted RBP12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 SLAIN2Q9P270 581 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 CLIP2Q9UDT6 1046 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 ROBO3Q96MS0 1386 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 TUBB4BP68371 445 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 FUT2Q10981 343 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 MYSM1Q5VVJ2 828 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 MSANTD4Q8NCY6 345 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 ZNF804BA4D1E1 1349 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 TAF1P21675 1872 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 LOC285556D6RIA3 1793 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 KIF28PB7ZC32 967 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 MORC3Q14149 939 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 CEP135Q66GS9 1140 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 LRRC2Q9BYS8 371 aa12.03□□□□□ -0.48
ERGIC1-211ENST00000523215 FOXD4Q12950 439 aaPredicted RBP12.02□□□□□ -0.48
ERGIC1-211ENST00000523215 TUBB2AQ13885 445 aa12.02□□□□□ -0.48
ERGIC1-211ENST00000523215 TUBB2BQ9BVA1 445 aa12.02□□□□□ -0.48
ERGIC1-211ENST00000523215 SCARF1Q14162 830 aa12.02□□□□□ -0.49
ERGIC1-211ENST00000523215 DNAJC25Q9H1X3 360 aa12.02□□□□□ -0.49
ERGIC1-211ENST00000523215 TACC3Q9Y6A5 838 aa12.02□□□□□ -0.49
ERGIC1-211ENST00000523215 ATP8B3O60423 1300 aa12.02□□□□□ -0.49
ERGIC1-211ENST00000523215 SETDB1Q15047 1291 aa12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 OSBP2Q969R2 916 aa12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 DDX11Q96FC9 970 aa12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 FTOQ9C0B1 505 aaKnown RBP eCLIP12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 VWA3AA6NCI4 1184 aa12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 BHMG1C9JSJ3 638 aaPredicted RBP12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 SHC4Q6S5L8 630 aa12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 CWC25Q9NXE8 425 aaPredicted RBP12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 DNAI1Q9UI46 699 aa12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 ZC3H4Q9UPT8 1303 aaKnown RBP12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 GOLIM4O00461 696 aa12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 WDHD1O75717 1129 aaPredicted RBP12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 ADD2P35612 726 aa12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 APPBP2Q92624 585 aa12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 TFIP11Q9UBB9 837 aaKnown RBP12.01□□□□□ -0.49
ERGIC1-211ENST00000523215 A0A1B0GTH6 734 aa12□□□□□ -0.49
ERGIC1-211ENST00000523215 GOLGA6CA6NDK9 693 aa12□□□□□ -0.49
ERGIC1-211ENST00000523215 GOLGA6BA6NDN3 693 aa12□□□□□ -0.49
ERGIC1-211ENST00000523215 CCP110O43303 1012 aa12□□□□□ -0.49
ERGIC1-211ENST00000523215 GOLGA6DP0CG33 693 aa12□□□□□ -0.49
ERGIC1-211ENST00000523215 NDUFA8P51970 172 aa12□□□□□ -0.49
ERGIC1-211ENST00000523215 CCDC158Q5M9N0 1113 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms