RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 PABPN1LA6NDY0 278 aaKnown RBP9.35□□□□□ -0.91
HMGB4-204ENST00000522796 ZSCAN12O43309 604 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 RPSAP08865 295 aaKnown RBP9.35□□□□□ -0.91
HMGB4-204ENST00000522796 USP5P45974 858 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 USP11P51784 963 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 RASSF7Q02833 373 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 ZCCHC8Q6NZY4 707 aaKnown RBP9.35□□□□□ -0.91
HMGB4-204ENST00000522796 CEP57L1Q8IYX8 460 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 SAMD14Q8IZD0 417 aaPredicted RBP9.35□□□□□ -0.91
HMGB4-204ENST00000522796 SYCP3Q8IZU3 236 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 CHCHD4Q8N4Q1 142 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 LRRCC1Q9C099 1032 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 ATP6V0A2Q9Y487 856 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 KIF14Q15058 1648 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 GRIN2AQ12879 1464 aa9.35□□□□□ -0.91
HMGB4-204ENST00000522796 MEFVO15553 781 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-204ENST00000522796 N4BP1O75113 896 aaKnown RBP9.34□□□□□ -0.91
HMGB4-204ENST00000522796 IFFO1Q0D2I5 559 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 DYNC1I2Q13409 638 aaKnown RBP9.34□□□□□ -0.91
HMGB4-204ENST00000522796 TRIM29Q14134 588 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 BTG3Q14201 252 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-204ENST00000522796 BEND6Q5SZJ8 279 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-204ENST00000522796 FAM117BQ6P1L5 589 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 PPP1R13BQ96KQ4 1090 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 CARD6Q9BX69 1037 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 CCDC68Q9H2F9 335 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 ZWILCHQ9H900 591 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 TUBGCP4Q9UGJ1 667 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 PPP1R12BO60237 982 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-204ENST00000522796 ETF1P62495 437 aaKnown RBP9.34□□□□□ -0.91
HMGB4-204ENST00000522796 ENOX2Q16206 610 aaKnown RBP9.34□□□□□ -0.91
HMGB4-204ENST00000522796 GBP3Q9H0R5 595 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 ALDH8A1Q9H2A2 487 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-204ENST00000522796 KIAA1522Q9P206 1035 aaPredicted RBP9.34□□□□□ -0.91
HMGB4-204ENST00000522796 TPCN1Q9ULQ1 816 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 ADAMTS8Q9UP79 889 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 CFTRP13569 1480 aa9.34□□□□□ -0.91
HMGB4-204ENST00000522796 TCOF1Q13428 1488 aaKnown RBP9.33□□□□□ -0.92
HMGB4-204ENST00000522796 PRXQ9BXM0 1461 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 IBSPP21815 317 aaPredicted RBP9.33□□□□□ -0.92
HMGB4-204ENST00000522796 RRM1P23921 792 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 HOXD11P31277 338 aaPredicted RBP9.33□□□□□ -0.92
HMGB4-204ENST00000522796 TXLNAP40222 546 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 MATR3P43243 847 aaKnown RBP eCLIP9.33□□□□□ -0.92
HMGB4-204ENST00000522796 TBC1D9Q6ZT07 1266 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 FAM228AQ86W67 206 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 LRRC49Q8IUZ0 686 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 SREK1Q8WXA9 508 aaKnown RBP9.33□□□□□ -0.92
HMGB4-204ENST00000522796 PRAM1Q96QH2 718 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 MAFFQ9ULX9 164 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 KDM5DQ9BY66 1539 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 A6NHS1 94 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 CCDC69A6NI79 296 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 POTEB2H3BUK9 544 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 PARP1P09874 1014 aaKnown RBP9.33□□□□□ -0.92
HMGB4-204ENST00000522796 LINGO3P0C6S8 592 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 ZFXP17010 805 aaPredicted RBP9.33□□□□□ -0.92
HMGB4-204ENST00000522796 GUCY1B3Q02153 619 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 DRP2Q13474 957 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 DDB1Q16531 1140 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 NUGGCQ68CJ6 796 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 GSDMAQ96QA5 445 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 EBF2Q9HAK2 575 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 SLC40A1Q9NP59 571 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 CHPF2Q9P2E5 772 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 ITGB1BP2Q9UKP3 347 aa9.33□□□□□ -0.92
HMGB4-204ENST00000522796 MBD5Q9P267 1494 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 SLC26A4O43511 780 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 ATP5JP18859 108 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 ZNF131P52739 623 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 CSE1LP55060 971 aaKnown RBP9.32□□□□□ -0.92
HMGB4-204ENST00000522796 GALNT17Q6IS24 598 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 SARM1Q6SZW1 724 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 LUZP1Q86V48 1076 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 DHTKD1Q96HY7 919 aaPredicted RBP9.32□□□□□ -0.92
HMGB4-204ENST00000522796 WDR70Q9NW82 654 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 MYO1AQ9UBC5 1043 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 L1RE1Q9UN81 338 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 ZNF652Q9Y2D9 606 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 SCINQ9Y6U3 715 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 MSH6P52701 1360 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 SETD1BQ9UPS6 1966 aaKnown RBP9.32□□□□□ -0.92
HMGB4-204ENST00000522796 MGRN1O60291 552 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 PENKP01210 267 aaPredicted RBP9.32□□□□□ -0.92
HMGB4-204ENST00000522796 PDHBP11177 359 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 RPL17P18621 184 aaKnown RBP9.32□□□□□ -0.92
HMGB4-204ENST00000522796 GSDMDP57764 484 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 PSME1Q06323 249 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 RC3H1Q5TC82 1133 aaKnown RBP9.32□□□□□ -0.92
HMGB4-204ENST00000522796 DCLK2Q8N568 766 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 WHAMMQ8TF30 809 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 LZICQ8WZA0 190 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 GOLGA1Q92805 767 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.32□□□□□ -0.92
HMGB4-204ENST00000522796 CENPHQ9H3R5 247 aa9.32□□□□□ -0.92
HMGB4-204ENST00000522796 HOOK1Q9UJC3 728 aaKnown RBP9.32□□□□□ -0.92
HMGB4-204ENST00000522796 LAMC3Q9Y6N6 1575 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 RNF40O75150 1001 aa9.31□□□□□ -0.92
HMGB4-204ENST00000522796 ABL1P00519 1130 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms