RNA–Protein interactions for RNA: ENST00000522777.1

PCM1-216, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 682 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-216ENST00000522777 NME2P22392 152 aa9.37□□□□□ -0.91
PCM1-216ENST00000522777 AFF1P51825 1210 aaKnown RBP9.37□□□□□ -0.91
PCM1-216ENST00000522777 ARID5AQ03989 594 aa9.37□□□□□ -0.91
PCM1-216ENST00000522777 FAM160A1Q05DH4 1040 aa9.37□□□□□ -0.91
PCM1-216ENST00000522777 KANK3Q6NY19 840 aa9.37□□□□□ -0.91
PCM1-216ENST00000522777 MCF2L2Q86YR7 1114 aa9.37□□□□□ -0.91
PCM1-216ENST00000522777 ABCA6Q8N139 1617 aa9.37□□□□□ -0.91
PCM1-216ENST00000522777 SOX1O00570 391 aaPredicted RBP9.36□□□□□ -0.91
PCM1-216ENST00000522777 ATF4P18848 351 aaPredicted RBP9.36□□□□□ -0.91
PCM1-216ENST00000522777 IKBKEQ14164 716 aa9.36□□□□□ -0.91
PCM1-216ENST00000522777 HGSNATQ68CP4 663 aa9.36□□□□□ -0.91
PCM1-216ENST00000522777 SULF2Q8IWU5 870 aa9.36□□□□□ -0.91
PCM1-216ENST00000522777 CLIP1P30622 1438 aa9.36□□□□□ -0.91
PCM1-216ENST00000522777 SLURP2P0DP57 97 aa9.35□□□□□ -0.91
PCM1-216ENST00000522777 TROQ12816 1431 aaPredicted RBP9.35□□□□□ -0.91
PCM1-216ENST00000522777 C8orf86Q6ZUL3 223 aa9.35□□□□□ -0.91
PCM1-216ENST00000522777 CHSY3Q70JA7 882 aa9.35□□□□□ -0.91
PCM1-216ENST00000522777 TRIM42Q8IWZ5 723 aa9.35□□□□□ -0.91
PCM1-216ENST00000522777 IL22RA1Q8N6P7 574 aa9.35□□□□□ -0.91
PCM1-216ENST00000522777 NT5C1AQ9BXI3 368 aa9.35□□□□□ -0.91
PCM1-216ENST00000522777 SOX17Q9H6I2 414 aaPredicted RBP9.35□□□□□ -0.91
PCM1-216ENST00000522777 PPP1R1BQ9UD71 204 aaPredicted RBP9.35□□□□□ -0.91
PCM1-216ENST00000522777 SUPT16HQ9Y5B9 1047 aaKnown RBP9.35□□□□□ -0.91
PCM1-216ENST00000522777 PCDHB5Q9Y5E4 795 aa9.35□□□□□ -0.91
PCM1-216ENST00000522777 KIF14Q15058 1648 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 PTPRKQ15262 1439 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 SHISA8B8ZZ34 492 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 M0R082 166 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 OIP5O43482 229 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 CABP4P57796 275 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 SNAP47Q5SQN1 464 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 TXNDC11Q6PKC3 985 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 PDZD3Q86UT5 571 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 GOLM1Q8NBJ4 401 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 ZNF417Q8TAU3 575 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 EDARADDQ8WWZ3 215 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 GAL3ST3Q96A11 431 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 ZNF587Q96SQ5 575 aaPredicted RBP9.34□□□□□ -0.91
PCM1-216ENST00000522777 SAMM50Q9Y512 469 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 CPS1P31327 1500 aa9.34□□□□□ -0.91
PCM1-216ENST00000522777 FMN1Q68DA7 1419 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 FAM177BA6PVY3 158 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 TM4SF5O14894 197 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 CRKP46108 304 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 ZNF252P-AS1Q0IIN9 211 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 GALNT6Q8NCL4 622 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 GRIN3AQ8TCU5 1115 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 ARMC5Q96C12 935 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 NRSN2Q9GZP1 204 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 PRDM6Q9NQX0 595 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 UBP1Q9NZI7 540 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 CYP8B1Q9UNU6 501 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 PPME1Q9Y570 386 aa9.33□□□□□ -0.92
PCM1-216ENST00000522777 CEP170BQ9Y4F5 1589 aaPredicted RBP9.33□□□□□ -0.92
PCM1-216ENST00000522777 MROH2AA6NES4 1674 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 LILRB5O75023 590 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 ATP2B1P20020 1258 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 ARNTP27540 789 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 COL9A3Q14050 684 aaPredicted RBP9.32□□□□□ -0.92
PCM1-216ENST00000522777 GGT6Q6P531 493 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 BNC2Q6ZN30 1099 aaPredicted RBP9.32□□□□□ -0.92
PCM1-216ENST00000522777 FAM196AQ6ZSG2 479 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 CCDC84Q86UT8 332 aaPredicted RBP9.32□□□□□ -0.92
PCM1-216ENST00000522777 VPS37DQ86XT2 251 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 DHX38Q92620 1227 aaKnown RBP9.32□□□□□ -0.92
PCM1-216ENST00000522777 SEC16BQ96JE7 1060 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 BTBD6Q96KE9 485 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 SPATA32Q96LK8 384 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 LRRC3Q9BY71 257 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 LRRC4BQ9NT99 713 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 SHANK2Q9UPX8 1470 aa9.32□□□□□ -0.92
PCM1-216ENST00000522777 MYO3AQ8NEV4 1616 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 FAM221AA4D161 298 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 LINC01387J3KSC0 135 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 F13A1P00488 732 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 BCRP11274 1271 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 CDC25BP30305 580 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 SOX9P48436 509 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 SEPT6Q14141 434 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 LLGL2Q6P1M3 1020 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 WNT8BQ93098 351 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.31□□□□□ -0.92
PCM1-216ENST00000522777 MIR1-1HGQ9H1L0 117 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 GINM1Q9NU53 330 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 CACNA2D2Q9NY47 1150 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 ABCC1P33527 1531 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 EEA1Q15075 1411 aa9.31□□□□□ -0.92
PCM1-216ENST00000522777 SPAG9O60271 1321 aaKnown RBP9.31□□□□□ -0.92
PCM1-216ENST00000522777 ZNF142P52746 1687 aaPredicted RBP9.3□□□□□ -0.92
PCM1-216ENST00000522777 HOXB4P17483 251 aaPredicted RBP9.3□□□□□ -0.92
PCM1-216ENST00000522777 AP3B2Q13367 1082 aa9.3□□□□□ -0.92
PCM1-216ENST00000522777 MSL1Q68DK7 614 aa9.3□□□□□ -0.92
PCM1-216ENST00000522777 LYPD4Q6UWN0 246 aa9.3□□□□□ -0.92
PCM1-216ENST00000522777 FBXO27Q8NI29 283 aa9.3□□□□□ -0.92
PCM1-216ENST00000522777 EMILIN2Q9BXX0 1053 aa9.3□□□□□ -0.92
PCM1-216ENST00000522777 EFR3BQ9Y2G0 817 aa9.3□□□□□ -0.92
PCM1-216ENST00000522777 A2ML1A8K2U0 1454 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 NID1P14543 1247 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 GMPRP36959 345 aa9.29□□□□□ -0.92
PCM1-216ENST00000522777 NASPP49321 788 aaPredicted RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms