RNA–Protein interactions for RNA: ENST00000521835.1

DENND3-217, Transcript of DENN domain containing 3, humanhuman

TSL 1 (best)

Gene DENND3, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-217ENST00000521835 CCDC94Q9BW85 323 aaPredicted RBP14.03□□□□□ -0.16
DENND3-217ENST00000521835 TEX13AQ9BXU3 409 aaPredicted RBP14.03□□□□□ -0.16
DENND3-217ENST00000521835 CASP1P29466 404 aa14.02□□□□□ -0.16
DENND3-217ENST00000521835 BRAPQ7Z569 592 aa14.02□□□□□ -0.16
DENND3-217ENST00000521835 DIS3L2Q8IYB7 885 aaKnown RBP14.02□□□□□ -0.16
DENND3-217ENST00000521835 LPIN2Q92539 896 aa14.02□□□□□ -0.16
DENND3-217ENST00000521835 UBAC1Q9BSL1 405 aa14.02□□□□□ -0.16
DENND3-217ENST00000521835 FAM205CA6NFA0 338 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 IGHMBP2P38935 993 aaKnown RBP14.02□□□□□ -0.17
DENND3-217ENST00000521835 NKX1-1Q15270 411 aaPredicted RBP14.02□□□□□ -0.17
DENND3-217ENST00000521835 TAF3Q5VWG9 929 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 SHC4Q6S5L8 630 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 DPF2Q92785 391 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 ZNF215Q9UL58 517 aaPredicted RBP14.02□□□□□ -0.17
DENND3-217ENST00000521835 KCPQ6ZWJ8 1503 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 CDKL5O76039 1030 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 WTAPQ15007 396 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 SAFBQ15424 915 aaKnown RBP eCLIP14.02□□□□□ -0.17
DENND3-217ENST00000521835 LONRF3Q496Y0 759 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 SYT10Q6XYQ8 523 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.02□□□□□ -0.17
DENND3-217ENST00000521835 LY9Q9HBG7 655 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 POLR3EQ9NVU0 708 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 RNF216Q9NWF9 866 aaPredicted RBP14.02□□□□□ -0.17
DENND3-217ENST00000521835 TACC3Q9Y6A5 838 aa14.02□□□□□ -0.17
DENND3-217ENST00000521835 TMEM232C9JQI7 657 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 YEATS4O95619 227 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 AFMP43652 599 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 EVX2Q03828 476 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 NCBP1Q09161 790 aaKnown RBP14.01□□□□□ -0.17
DENND3-217ENST00000521835 RTN1Q16799 776 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 AXDND1Q5T1B0 1012 aaPredicted RBP14.01□□□□□ -0.17
DENND3-217ENST00000521835 OXER1Q8TDS5 423 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 STX17P56962 302 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 FANCCQ00597 558 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 MRFAP1L1Q96HT8 127 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 CABP5Q9NP86 173 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 VPS54Q9P1Q0 977 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 BCCIPQ9P287 314 aaKnown RBP eCLIP14.01□□□□□ -0.17
DENND3-217ENST00000521835 LAMA4Q16363 1823 aa14.01□□□□□ -0.17
DENND3-217ENST00000521835 POLR2DO15514 142 aaKnown RBP14□□□□□ -0.17
DENND3-217ENST00000521835 UBASH3AP57075 661 aa14□□□□□ -0.17
DENND3-217ENST00000521835 DYNLL1P63167 89 aaKnown RBP14□□□□□ -0.17
DENND3-217ENST00000521835 TRIM22Q8IYM9 498 aa14□□□□□ -0.17
DENND3-217ENST00000521835 ADAMTSL3P82987 1691 aa14□□□□□ -0.17
DENND3-217ENST00000521835 CRKLP46109 303 aaKnown RBP14□□□□□ -0.17
DENND3-217ENST00000521835 CCZ1BP86790 482 aa14□□□□□ -0.17
DENND3-217ENST00000521835 CCZ1P86791 482 aaPredicted RBP14□□□□□ -0.17
DENND3-217ENST00000521835 AKAP17AQ02040 695 aaKnown RBP14□□□□□ -0.17
DENND3-217ENST00000521835 SLC39A14Q15043 492 aa14□□□□□ -0.17
DENND3-217ENST00000521835 USP49Q70CQ1 688 aa14□□□□□ -0.17
DENND3-217ENST00000521835 NBPF11Q86T75 865 aa14□□□□□ -0.17
DENND3-217ENST00000521835 SOS2Q07890 1332 aaPredicted RBP14□□□□□ -0.17
DENND3-217ENST00000521835 COL18A1P39060 1754 aa14□□□□□ -0.17
DENND3-217ENST00000521835 UQCRFS1P1P0C7P4 283 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 SART3Q15020 963 aaKnown RBP13.99□□□□□ -0.17
DENND3-217ENST00000521835 ELF2Q15723 593 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 FAM182BQ5T319 152 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 OLFM4Q6UX06 510 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 VGLL2Q8N8G2 317 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.99□□□□□ -0.17
DENND3-217ENST00000521835 UTP14AQ9BVJ6 771 aaKnown RBP13.99□□□□□ -0.17
DENND3-217ENST00000521835 NACAP1Q9BZK3 213 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 FANCLQ9NW38 375 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 KCNH3Q9ULD8 1083 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 PCDHA5Q9Y5H7 936 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 SMTNL1A8MU46 457 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 NLRP12P59046 1061 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 AKNAD1Q5T1N1 836 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 ARMCX5Q6P1M9 558 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 JMYQ8N9B5 988 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 IGDCC4Q8TDY8 1250 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 CPLX3Q8WVH0 158 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 PCDHB6Q9Y5E3 794 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 GSG1L2A8MUP6 293 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 KCNQ2O43526 872 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 CAVIN2O95810 425 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 PRR29P0C7W0 189 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 TRIM28Q13263 835 aaKnown RBP13.99□□□□□ -0.17
DENND3-217ENST00000521835 UBE3CQ15386 1083 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 ADGRA1Q86SQ6 560 aa13.99□□□□□ -0.17
DENND3-217ENST00000521835 CGNQ9P2M7 1197 aaKnown RBP13.99□□□□□ -0.17
DENND3-217ENST00000521835 STRCP1A6NGW2 1772 aa13.98□□□□□ -0.17
DENND3-217ENST00000521835 A0A1W2PQ27 194 aa13.98□□□□□ -0.17
DENND3-217ENST00000521835 A0A1W2PQ64 194 aa13.98□□□□□ -0.17
DENND3-217ENST00000521835 A0A1W2PQD8 194 aa13.98□□□□□ -0.17
DENND3-217ENST00000521835 PATL2C9JE40 543 aaKnown RBP13.98□□□□□ -0.17
DENND3-217ENST00000521835 CMA1P23946 247 aa13.98□□□□□ -0.17
DENND3-217ENST00000521835 CHRNDQ07001 517 aa13.98□□□□□ -0.17
DENND3-217ENST00000521835 DHX58Q96C10 678 aa13.98□□□□□ -0.17
DENND3-217ENST00000521835 TFCP2L1Q9NZI6 479 aa13.98□□□□□ -0.17
DENND3-217ENST00000521835 CCAR2Q8N163 923 aaKnown RBP13.98□□□□□ -0.17
DENND3-217ENST00000521835 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.98□□□□□ -0.17
DENND3-217ENST00000521835 UTRNP46939 3433 aa13.98□□□□□ -0.17
DENND3-217ENST00000521835 ADAMTS7Q9UKP4 1686 aa13.98□□□□□ -0.17
DENND3-217ENST00000521835 ATL3Q6DD88 541 aa13.97□□□□□ -0.17
DENND3-217ENST00000521835 HOMEZQ8IX15 550 aa13.97□□□□□ -0.17
DENND3-217ENST00000521835 SMYD4Q8IYR2 804 aaPredicted RBP13.97□□□□□ -0.17
DENND3-217ENST00000521835 FAM217BQ9NTX9 383 aaPredicted RBP13.97□□□□□ -0.17
DENND3-217ENST00000521835 SERTAD1Q9UHV2 236 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms