RNA–Protein interactions for RNA: ENST00000521439.1

NUDCD1-204, Transcript of NudC domain containing 1, humanhuman

TSL 1 (best)

Gene NUDCD1, Length 1,172 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-204ENST00000521439 CCDC86Q9H6F5 360 aaKnown RBP10.38□□□□□ -0.75
NUDCD1-204ENST00000521439 UBP1Q9NZI7 540 aa10.38□□□□□ -0.75
NUDCD1-204ENST00000521439 ALX3O95076 343 aa10.37□□□□□ -0.75
NUDCD1-204ENST00000521439 DNAJA1P31689 397 aaKnown RBP10.37□□□□□ -0.75
NUDCD1-204ENST00000521439 HNRNPUQ00839 825 aaKnown RBP eCLIP10.37□□□□□ -0.75
NUDCD1-204ENST00000521439 PDE3AQ14432 1141 aa10.37□□□□□ -0.75
NUDCD1-204ENST00000521439 Q6ZS46 218 aa10.37□□□□□ -0.75
NUDCD1-204ENST00000521439 GPBAR1Q8TDU6 330 aa10.37□□□□□ -0.75
NUDCD1-204ENST00000521439 USP35Q9P2H5 1018 aa10.37□□□□□ -0.75
NUDCD1-204ENST00000521439 CILPO75339 1184 aa10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 H2AFB1P0C5Y9 115 aa10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 H2AFB2P0C5Z0 115 aa10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 ATF4P18848 351 aaPredicted RBP10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 APOBRQ0VD83 1088 aa10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 MPP2Q14168 576 aa10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 DZIP1LQ8IYY4 767 aaKnown RBP10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 AGGF1Q8N302 714 aaeCLIP10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 ACSBG1Q96GR2 724 aa10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 LRRC3Q9BY71 257 aa10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 TANGO6Q9C0B7 1094 aa10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 PRKAG2Q9UGJ0 569 aa10.36□□□□□ -0.75
NUDCD1-204ENST00000521439 CRKP46108 304 aa10.35□□□□□ -0.75
NUDCD1-204ENST00000521439 UBASH3BQ8TF42 649 aa10.35□□□□□ -0.75
NUDCD1-204ENST00000521439 NKD1Q969G9 470 aa10.35□□□□□ -0.75
NUDCD1-204ENST00000521439 SEC16BQ96JE7 1060 aa10.35□□□□□ -0.75
NUDCD1-204ENST00000521439 SEMA6BQ9H3T3 888 aa10.35□□□□□ -0.75
NUDCD1-204ENST00000521439 DYRK3O43781 588 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 ZNF862O60290 1169 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 IGSF3O75054 1194 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 BPNT1O95861 308 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 DLGAP3O95886 979 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 GLB1P16278 677 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 LIG1P18858 919 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 KIAA1211Q6ZU35 1233 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 SLITRK4Q8IW52 837 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 FBXO27Q8NI29 283 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 CEP41Q9BYV8 373 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 PCDHA4Q9UN74 947 aa10.34□□□□□ -0.75
NUDCD1-204ENST00000521439 TLR3O15455 904 aaKnown RBP10.33□□□□□ -0.76
NUDCD1-204ENST00000521439 RPL6Q02878 288 aaKnown RBP10.33□□□□□ -0.76
NUDCD1-204ENST00000521439 COL9A2Q14055 689 aaPredicted RBP10.33□□□□□ -0.76
NUDCD1-204ENST00000521439 CWF19L2Q2TBE0 894 aaKnown RBP10.33□□□□□ -0.76
NUDCD1-204ENST00000521439 KIF4BQ2VIQ3 1234 aa10.33□□□□□ -0.76
NUDCD1-204ENST00000521439 EXOSC6Q5RKV6 272 aaKnown RBP10.33□□□□□ -0.76
NUDCD1-204ENST00000521439 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.33□□□□□ -0.76
NUDCD1-204ENST00000521439 WDR89Q96FK6 387 aaPredicted RBP10.33□□□□□ -0.76
NUDCD1-204ENST00000521439 EFR3BQ9Y2G0 817 aa10.33□□□□□ -0.76
NUDCD1-204ENST00000521439 SEZ6Q53EL9 994 aa10.32□□□□□ -0.76
NUDCD1-204ENST00000521439 RNF208Q9H0X6 261 aa10.32□□□□□ -0.76
NUDCD1-204ENST00000521439 GINM1Q9NU53 330 aa10.32□□□□□ -0.76
NUDCD1-204ENST00000521439 AOC2O75106 756 aa10.31□□□□□ -0.76
NUDCD1-204ENST00000521439 SLFN14P0C7P3 912 aa10.31□□□□□ -0.76
NUDCD1-204ENST00000521439 ATP2B1P20020 1258 aa10.31□□□□□ -0.76
NUDCD1-204ENST00000521439 REC114Q7Z4M0 266 aa10.31□□□□□ -0.76
NUDCD1-204ENST00000521439 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.31□□□□□ -0.76
NUDCD1-204ENST00000521439 WDR18Q9BV38 432 aa10.31□□□□□ -0.76
NUDCD1-204ENST00000521439 RUSC1Q9BVN2 902 aa10.31□□□□□ -0.76
NUDCD1-204ENST00000521439 RAD18Q9NS91 495 aa10.31□□□□□ -0.76
NUDCD1-204ENST00000521439 PPP1R1BQ9UD71 204 aaPredicted RBP10.31□□□□□ -0.76
NUDCD1-204ENST00000521439 SYNGAP1Q96PV0 1343 aa10.31□□□□□ -0.76
NUDCD1-204ENST00000521439 MEGF11A6BM72 1044 aa10.3□□□□□ -0.76
NUDCD1-204ENST00000521439 FGRP09769 529 aa10.3□□□□□ -0.76
NUDCD1-204ENST00000521439 SOX9P48436 509 aa10.3□□□□□ -0.76
NUDCD1-204ENST00000521439 NASPP49321 788 aaPredicted RBP10.3□□□□□ -0.76
NUDCD1-204ENST00000521439 MCF2L2Q86YR7 1114 aa10.3□□□□□ -0.76
NUDCD1-204ENST00000521439 TMPRSS13Q9BYE2 586 aa10.3□□□□□ -0.76
NUDCD1-204ENST00000521439 SNCAIPQ9Y6H5 919 aa10.3□□□□□ -0.76
NUDCD1-204ENST00000521439 CDK8P49336 464 aa10.29□□□□□ -0.76
NUDCD1-204ENST00000521439 INPP5AQ14642 412 aa10.29□□□□□ -0.76
NUDCD1-204ENST00000521439 UVSSAQ2YD98 709 aa10.29□□□□□ -0.76
NUDCD1-204ENST00000521439 ANKRD34AQ69YU3 496 aa10.29□□□□□ -0.76
NUDCD1-204ENST00000521439 HDXQ7Z353 690 aa10.29□□□□□ -0.76
NUDCD1-204ENST00000521439 PLPPR2Q96GM1 343 aa10.29□□□□□ -0.76
NUDCD1-204ENST00000521439 UBL7Q96S82 380 aaPredicted RBP10.29□□□□□ -0.76
NUDCD1-204ENST00000521439 GFRA2O00451 464 aa10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 MCM4P33991 863 aa10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 ZNF165P49910 485 aa10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 ZC3H12AQ5D1E8 599 aaKnown RBP10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 WIPI1Q5MNZ9 446 aaPredicted RBP10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 NUTM2GQ5VZR2 741 aa10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 LRFN4Q6PJG9 635 aa10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 PRR23CQ6ZRP0 262 aa10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 UBXN4Q92575 508 aa10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 BRMS1Q9HCU9 246 aa10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 PCDHGC5Q9Y5F6 944 aa10.28□□□□□ -0.76
NUDCD1-204ENST00000521439 REXO1Q8N1G1 1221 aaKnown RBP10.27□□□□□ -0.77
NUDCD1-204ENST00000521439 ELMO3Q96BJ8 720 aa10.27□□□□□ -0.77
NUDCD1-204ENST00000521439 SUGCTQ9HAC7 445 aa10.27□□□□□ -0.77
NUDCD1-204ENST00000521439 CYP4F12Q9HCS2 524 aa10.27□□□□□ -0.77
NUDCD1-204ENST00000521439 DCDC2CA8MYV0 355 aa10.26□□□□□ -0.77
NUDCD1-204ENST00000521439 ITGB7P26010 798 aa10.26□□□□□ -0.77
NUDCD1-204ENST00000521439 FDX2Q6P4F2 183 aa10.26□□□□□ -0.77
NUDCD1-204ENST00000521439 SMG8Q8ND04 991 aaKnown RBP10.26□□□□□ -0.77
NUDCD1-204ENST00000521439 ARMC5Q96C12 935 aa10.26□□□□□ -0.77
NUDCD1-204ENST00000521439 STRIP2Q9ULQ0 834 aa10.26□□□□□ -0.77
NUDCD1-204ENST00000521439 POLR3KQ9Y2Y1 108 aaPredicted RBP10.26□□□□□ -0.77
NUDCD1-204ENST00000521439 SSBP05455 408 aaKnown RBP eCLIP10.25□□□□□ -0.77
NUDCD1-204ENST00000521439 ID3Q02535 119 aa10.25□□□□□ -0.77
NUDCD1-204ENST00000521439 AKAP4Q5JQC9 854 aa10.25□□□□□ -0.77
NUDCD1-204ENST00000521439 PRSS36Q5K4E3 855 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms