RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 PCDH1Q08174 1060 aa9.27□□□□□ -0.93
TVP23C-206ENST00000521179 SUZ12Q15022 739 aaKnown RBP9.27□□□□□ -0.93
TVP23C-206ENST00000521179 ZNF423Q2M1K9 1284 aa9.27□□□□□ -0.93
TVP23C-206ENST00000521179 HGSNATQ68CP4 663 aa9.27□□□□□ -0.93
TVP23C-206ENST00000521179 SHISA2Q6UWI4 295 aa9.27□□□□□ -0.93
TVP23C-206ENST00000521179 CD163Q86VB7 1156 aa9.27□□□□□ -0.93
TVP23C-206ENST00000521179 CARD10Q9BWT7 1032 aa9.27□□□□□ -0.93
TVP23C-206ENST00000521179 FGD6Q6ZV73 1430 aa9.27□□□□□ -0.93
TVP23C-206ENST00000521179 PTPN23Q9H3S7 1636 aa9.27□□□□□ -0.93
TVP23C-206ENST00000521179 ADGBQ8N7X0 1667 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 C1QTNF9BB2RNN3 333 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 CHRNA4P43681 627 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 NRG1Q02297 640 aaPredicted RBP9.26□□□□□ -0.93
TVP23C-206ENST00000521179 C19orf57Q0VDD7 668 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 PLA2G4EQ3MJ16 856 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 DTHD1Q6ZMT9 781 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 C3orf58Q8NDZ4 430 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 SLC7A3Q8WY07 619 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 C12orf49Q9H741 205 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 RRP7BPQ9NSQ0 103 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 RNF19AQ9NV58 838 aa9.26□□□□□ -0.93
TVP23C-206ENST00000521179 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
TVP23C-206ENST00000521179 TAGLNQ01995 201 aaKnown RBP9.25□□□□□ -0.93
TVP23C-206ENST00000521179 FOXD4L6Q3SYB3 417 aaPredicted RBP9.25□□□□□ -0.93
TVP23C-206ENST00000521179 FOXD4L3Q6VB84 417 aaPredicted RBP9.25□□□□□ -0.93
TVP23C-206ENST00000521179 TMEM130Q8N3G9 435 aa9.25□□□□□ -0.93
TVP23C-206ENST00000521179 MRPL18Q9H0U6 180 aaKnown RBP9.25□□□□□ -0.93
TVP23C-206ENST00000521179 KCNK4Q9NYG8 393 aa9.25□□□□□ -0.93
TVP23C-206ENST00000521179 PARP2Q9UGN5 583 aa9.25□□□□□ -0.93
TVP23C-206ENST00000521179 AK5Q9Y6K8 562 aa9.25□□□□□ -0.93
TVP23C-206ENST00000521179 ABCC5O15440 1437 aa9.24□□□□□ -0.93
TVP23C-206ENST00000521179 B3GALT4O96024 378 aa9.24□□□□□ -0.93
TVP23C-206ENST00000521179 GSTT1P30711 240 aa9.24□□□□□ -0.93
TVP23C-206ENST00000521179 DAB2P98082 770 aa9.24□□□□□ -0.93
TVP23C-206ENST00000521179 ADGRE1Q14246 886 aa9.24□□□□□ -0.93
TVP23C-206ENST00000521179 BCL2L13Q9BXK5 485 aa9.24□□□□□ -0.93
TVP23C-206ENST00000521179 FAM8A1Q9UBU6 413 aa9.24□□□□□ -0.93
TVP23C-206ENST00000521179 TCOF1Q13428 1488 aaKnown RBP9.23□□□□□ -0.93
TVP23C-206ENST00000521179 ADAM11O75078 769 aa9.23□□□□□ -0.93
TVP23C-206ENST00000521179 DIEXFQ68CQ4 756 aaKnown RBP9.23□□□□□ -0.93
TVP23C-206ENST00000521179 FOXD4L4Q8WXT5 416 aaPredicted RBP9.23□□□□□ -0.93
TVP23C-206ENST00000521179 PLXNC1O60486 1568 aa9.23□□□□□ -0.93
TVP23C-206ENST00000521179 ZMYM3Q14202 1370 aa9.23□□□□□ -0.93
TVP23C-206ENST00000521179 DAPK1P53355 1430 aa9.22□□□□□ -0.93
TVP23C-206ENST00000521179 CNTLNQ9NXG0 1405 aa9.22□□□□□ -0.93
TVP23C-206ENST00000521179 MAST1Q9Y2H9 1570 aa9.22□□□□□ -0.93
TVP23C-206ENST00000521179 DDX3YO15523 660 aaKnown RBP9.22□□□□□ -0.93
TVP23C-206ENST00000521179 EIF4BP23588 611 aaKnown RBP9.22□□□□□ -0.93
TVP23C-206ENST00000521179 ITGAEP38570 1179 aa9.22□□□□□ -0.93
TVP23C-206ENST00000521179 FAAP100Q0VG06 881 aa9.22□□□□□ -0.93
TVP23C-206ENST00000521179 MBTPS1Q14703 1052 aa9.22□□□□□ -0.93
TVP23C-206ENST00000521179 TMC4Q7Z404 712 aa9.22□□□□□ -0.93
TVP23C-206ENST00000521179 ANKRD24Q8TF21 1146 aa9.22□□□□□ -0.93
TVP23C-206ENST00000521179 SETD1BQ9UPS6 1966 aaKnown RBP9.22□□□□□ -0.93
TVP23C-206ENST00000521179 WASHC2CQ9Y4E1 1318 aa9.22□□□□□ -0.93
TVP23C-206ENST00000521179 XPCQ01831 940 aaPredicted RBP9.21□□□□□ -0.94
TVP23C-206ENST00000521179 ZNF326Q5BKZ1 582 aaKnown RBP9.21□□□□□ -0.94
TVP23C-206ENST00000521179 NRSN2Q9GZP1 204 aa9.21□□□□□ -0.94
TVP23C-206ENST00000521179 USP21Q9UK80 565 aa9.21□□□□□ -0.94
TVP23C-206ENST00000521179 PPM1HQ9ULR3 514 aa9.21□□□□□ -0.94
TVP23C-206ENST00000521179 AKAP2Q9Y2D5 859 aa9.21□□□□□ -0.94
TVP23C-206ENST00000521179 SETD1AO15047 1707 aaKnown RBP9.21□□□□□ -0.94
TVP23C-206ENST00000521179 ANKRD30AQ9BXX3 1397 aa9.21□□□□□ -0.94
TVP23C-206ENST00000521179 DNMT1P26358 1616 aaKnown RBP9.2□□□□□ -0.94
TVP23C-206ENST00000521179 C3P01024 1663 aa9.2□□□□□ -0.94
TVP23C-206ENST00000521179 CLTCQ00610 1675 aaKnown RBP9.2□□□□□ -0.94
TVP23C-206ENST00000521179 F8W735 103 aaPredicted RBP9.2□□□□□ -0.94
TVP23C-206ENST00000521179 WISP1O95388 367 aa9.2□□□□□ -0.94
TVP23C-206ENST00000521179 GSTM4Q03013 218 aa9.2□□□□□ -0.94
TVP23C-206ENST00000521179 PSMD2Q13200 908 aa9.2□□□□□ -0.94
TVP23C-206ENST00000521179 DUOXA2Q1HG44 320 aa9.2□□□□□ -0.94
TVP23C-206ENST00000521179 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.2□□□□□ -0.94
TVP23C-206ENST00000521179 DDX54Q8TDD1 881 aaKnown RBP9.2□□□□□ -0.94
TVP23C-206ENST00000521179 GIPC2Q8TF65 315 aa9.2□□□□□ -0.94
TVP23C-206ENST00000521179 ZNF335Q9H4Z2 1342 aaPredicted RBP9.2□□□□□ -0.94
TVP23C-206ENST00000521179 KIF15Q9NS87 1388 aa9.2□□□□□ -0.94
TVP23C-206ENST00000521179 USP17L7P0C7H9 530 aa9.19□□□□□ -0.94
TVP23C-206ENST00000521179 NLRP12P59046 1061 aa9.19□□□□□ -0.94
TVP23C-206ENST00000521179 KIAA1211Q6ZU35 1233 aa9.19□□□□□ -0.94
TVP23C-206ENST00000521179 WFDC12Q8WWY7 111 aa9.19□□□□□ -0.94
TVP23C-206ENST00000521179 SHANK2Q9UPX8 1470 aa9.19□□□□□ -0.94
TVP23C-206ENST00000521179 DUOX2Q9NRD8 1548 aa9.19□□□□□ -0.94
TVP23C-206ENST00000521179 CROCC2H7BZ55 1655 aa9.18□□□□□ -0.94
TVP23C-206ENST00000521179 IGHA1P01876 353 aa9.18□□□□□ -0.94
TVP23C-206ENST00000521179 ZNF16P17020 682 aaPredicted RBP9.18□□□□□ -0.94
TVP23C-206ENST00000521179 GATA4P43694 442 aa9.18□□□□□ -0.94
TVP23C-206ENST00000521179 NCOA1Q15788 1441 aa9.18□□□□□ -0.94
TVP23C-206ENST00000521179 TXNRD3Q86VQ6 643 aa9.18□□□□□ -0.94
TVP23C-206ENST00000521179 RGS22Q8NE09 1264 aa9.18□□□□□ -0.94
TVP23C-206ENST00000521179 UBASH3BQ8TF42 649 aa9.18□□□□□ -0.94
TVP23C-206ENST00000521179 TRIM56Q9BRZ2 755 aaKnown RBP9.18□□□□□ -0.94
TVP23C-206ENST00000521179 AKTIPQ9H8T0 292 aa9.18□□□□□ -0.94
TVP23C-206ENST00000521179 TMEM39AQ9NV64 488 aa9.18□□□□□ -0.94
TVP23C-206ENST00000521179 CCDC9Q9Y3X0 531 aaKnown RBP9.18□□□□□ -0.94
TVP23C-206ENST00000521179 UHRF1BP1Q6BDS2 1440 aa9.17□□□□□ -0.94
TVP23C-206ENST00000521179 RBM47A0AV96 593 aaKnown RBP9.17□□□□□ -0.94
TVP23C-206ENST00000521179 CYP11A1P05108 521 aa9.17□□□□□ -0.94
TVP23C-206ENST00000521179 NOS3P29474 1203 aa9.17□□□□□ -0.94
TVP23C-206ENST00000521179 FAM161BQ96MY7 647 aa9.17□□□□□ -0.94
TVP23C-206ENST00000521179 NECAB3Q96P71 396 aaPredicted RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms