RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 NOL8Q76FK4 1167 aaKnown RBP17.89■□□□□ 0.45
SREK1-209ENST00000520953 NAV1Q8NEY1 1877 aa17.89■□□□□ 0.45
SREK1-209ENST00000520953 ZMYM6O95789 1325 aa17.89■□□□□ 0.45
SREK1-209ENST00000520953 FLT1P17948 1338 aa17.89■□□□□ 0.45
SREK1-209ENST00000520953 MYO3BQ8WXR4 1341 aa17.89■□□□□ 0.45
SREK1-209ENST00000520953 TIAM2Q8IVF5 1701 aa17.89■□□□□ 0.45
SREK1-209ENST00000520953 C9orf131Q5VYM1 1079 aa17.89■□□□□ 0.45
SREK1-209ENST00000520953 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
SREK1-209ENST00000520953 ZFPM1Q8IX07 1006 aa17.89■□□□□ 0.45
SREK1-209ENST00000520953 AGBL3Q8NEM8 1001 aa17.89■□□□□ 0.45
SREK1-209ENST00000520953 TDRD3Q9H7E2 651 aaKnown RBP17.89■□□□□ 0.45
SREK1-209ENST00000520953 MCM9Q9NXL9 1143 aa17.89■□□□□ 0.45
SREK1-209ENST00000520953 NEDD4P46934 1319 aa17.88■□□□□ 0.45
SREK1-209ENST00000520953 PPARAQ07869 468 aa17.88■□□□□ 0.45
SREK1-209ENST00000520953 TNIP1Q15025 636 aa17.88■□□□□ 0.45
SREK1-209ENST00000520953 LRRC2Q9BYS8 371 aa17.88■□□□□ 0.45
SREK1-209ENST00000520953 ZSWIM6Q9HCJ5 1215 aa17.88■□□□□ 0.45
SREK1-209ENST00000520953 ATP8A2Q9NTI2 1148 aa17.88■□□□□ 0.45
SREK1-209ENST00000520953 ECM29Q5VYK3 1845 aa17.88■□□□□ 0.45
SREK1-209ENST00000520953 SLURP2P0DP57 97 aa17.87■□□□□ 0.45
SREK1-209ENST00000520953 HDLBPQ00341 1268 aaKnown RBP17.87■□□□□ 0.45
SREK1-209ENST00000520953 DDX60LQ5H9U9 1706 aaKnown RBP17.87■□□□□ 0.45
SREK1-209ENST00000520953 FOCADQ5VW36 1801 aa17.87■□□□□ 0.45
SREK1-209ENST00000520953 NEK1Q96PY6 1258 aa17.87■□□□□ 0.45
SREK1-209ENST00000520953 MRIQ9BWK5 157 aa17.87■□□□□ 0.45
SREK1-209ENST00000520953 SCAF8Q9UPN6 1271 aaKnown RBP17.87■□□□□ 0.45
SREK1-209ENST00000520953 CLRN2A0PK11 232 aa17.86■□□□□ 0.45
SREK1-209ENST00000520953 SPDYE2BA6NHP3 402 aa17.86■□□□□ 0.45
SREK1-209ENST00000520953 SPDYE6P0CI01 402 aa17.86■□□□□ 0.45
SREK1-209ENST00000520953 PLCD1P51178 756 aa17.86■□□□□ 0.45
SREK1-209ENST00000520953 RBM26Q5T8P6 1007 aaKnown RBP17.86■□□□□ 0.45
SREK1-209ENST00000520953 TTC14Q96N46 770 aa17.86■□□□□ 0.45
SREK1-209ENST00000520953 NBPF9Q3BBW0 867 aa17.86■□□□□ 0.45
SREK1-209ENST00000520953 RUFY3Q7L099 469 aa17.86■□□□□ 0.45
SREK1-209ENST00000520953 SAMD7Q7Z3H4 446 aa17.86■□□□□ 0.45
SREK1-209ENST00000520953 OGFOD1Q8N543 542 aa17.86■□□□□ 0.45
SREK1-209ENST00000520953 DYNLL2Q96FJ2 89 aa17.86■□□□□ 0.45
SREK1-209ENST00000520953 LAMB1P07942 1786 aa17.85■□□□□ 0.45
SREK1-209ENST00000520953 PRDM1O75626 825 aa17.85■□□□□ 0.45
SREK1-209ENST00000520953 DDNO94850 711 aaPredicted RBP17.85■□□□□ 0.45
SREK1-209ENST00000520953 PLCG2P16885 1265 aa17.85■□□□□ 0.45
SREK1-209ENST00000520953 TCP10Q12799 353 aa17.85■□□□□ 0.45
SREK1-209ENST00000520953 NFKBIBQ15653 356 aa17.85■□□□□ 0.45
SREK1-209ENST00000520953 GIMAP6Q6P9H5 292 aa17.85■□□□□ 0.45
SREK1-209ENST00000520953 MICALL2Q8IY33 904 aa17.85■□□□□ 0.45
SREK1-209ENST00000520953 TM6SF1Q9BZW5 370 aa17.85■□□□□ 0.45
SREK1-209ENST00000520953 GPHNQ9NQX3 736 aaPredicted RBP17.85■□□□□ 0.45
SREK1-209ENST00000520953 FAM198AQ9UFP1 575 aa17.85■□□□□ 0.45
SREK1-209ENST00000520953 ASTN2O75129 1339 aaPredicted RBP17.85■□□□□ 0.45
SREK1-209ENST00000520953 MYH1P12882 1939 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 B4E1Z4 1266 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 RPS6KB1P23443 525 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 DLGAP5Q15398 846 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 BLOC1S2Q6QNY1 142 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 MYOZ2Q9NPC6 264 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 HDAC9Q9UKV0 1011 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 CYP46A1Q9Y6A2 500 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 AK2P54819 239 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 ANTXR2P58335 489 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 KRT32Q14532 448 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 C12orf60Q5U649 245 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 CYB5R4Q7L1T6 521 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 SLC44A5Q8NCS7 719 aa17.84■□□□□ 0.45
SREK1-209ENST00000520953 CNOT7Q9UIV1 285 aaKnown RBP17.84■□□□□ 0.45
SREK1-209ENST00000520953 ZNF280AP59817 542 aaPredicted RBP17.83■□□□□ 0.45
SREK1-209ENST00000520953 TBC1D10BQ4KMP7 808 aaPredicted RBP17.83■□□□□ 0.45
SREK1-209ENST00000520953 RRP12Q5JTH9 1297 aaKnown RBP17.83■□□□□ 0.45
SREK1-209ENST00000520953 AKNAD1Q5T1N1 836 aa17.83■□□□□ 0.45
SREK1-209ENST00000520953 MB21D2Q8IYB1 491 aaPredicted RBP17.83■□□□□ 0.45
SREK1-209ENST00000520953 SPRYD3Q8NCJ5 442 aa17.83■□□□□ 0.45
SREK1-209ENST00000520953 ZBED3Q96IU2 234 aaPredicted RBP17.83■□□□□ 0.45
SREK1-209ENST00000520953 PDRG1Q9NUG6 133 aa17.83■□□□□ 0.45
SREK1-209ENST00000520953 ANAPC4Q9UJX5 808 aa17.83■□□□□ 0.45
SREK1-209ENST00000520953 WNT10BO00744 389 aa17.83■□□□□ 0.44
SREK1-209ENST00000520953 PSMA5P28066 241 aa17.83■□□□□ 0.44
SREK1-209ENST00000520953 SNX21Q969T3 373 aa17.83■□□□□ 0.44
SREK1-209ENST00000520953 ARPP21Q9UBL0 812 aaPredicted RBP17.83■□□□□ 0.44
SREK1-209ENST00000520953 POLR3DP05423 398 aaPredicted RBP17.82■□□□□ 0.44
SREK1-209ENST00000520953 SBK1Q52WX2 424 aa17.82■□□□□ 0.44
SREK1-209ENST00000520953 SH3BP5LQ7L8J4 393 aa17.82■□□□□ 0.44
SREK1-209ENST00000520953 STAG1Q8WVM7 1258 aa17.82■□□□□ 0.44
SREK1-209ENST00000520953 OSBPL5Q9H0X9 879 aaPredicted RBP17.82■□□□□ 0.44
SREK1-209ENST00000520953 TOMM22Q9NS69 142 aa17.82■□□□□ 0.44
SREK1-209ENST00000520953 TCP10L2B9ZVM9 353 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 ST18O60284 1047 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 DTNBO60941 627 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 RPS12P25398 132 aaKnown RBP17.81■□□□□ 0.44
SREK1-209ENST00000520953 EXOSC10Q01780 885 aaKnown RBP17.81■□□□□ 0.44
SREK1-209ENST00000520953 CERS3Q8IU89 383 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 GPC2Q8N158 579 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 SLKQ9H2G2 1235 aaPredicted RBP17.81■□□□□ 0.44
SREK1-209ENST00000520953 ZNF70Q9UC06 446 aaPredicted RBP17.81■□□□□ 0.44
SREK1-209ENST00000520953 KDM4AO75164 1064 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 LARGE1O95461 756 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 EPS15P42566 896 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 TOB2Q14106 344 aaPredicted RBP17.81■□□□□ 0.44
SREK1-209ENST00000520953 MFSD6Q6ZSS7 791 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 Q6ZUG5 572 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 CDAN1Q8IWY9 1227 aa17.81■□□□□ 0.44
SREK1-209ENST00000520953 NCOA7Q8NI08 942 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms