RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 CCDC27Q2M243 656 aa10.07□□□□□ -0.8
SHPRH-208ENST00000520752 CCDC30Q5VVM6 783 aa10.07□□□□□ -0.8
SHPRH-208ENST00000520752 TMCO3Q6UWJ1 677 aa10.07□□□□□ -0.8
SHPRH-208ENST00000520752 ANKRD23Q86SG2 305 aa10.07□□□□□ -0.8
SHPRH-208ENST00000520752 KCNF1Q9H3M0 494 aa10.07□□□□□ -0.8
SHPRH-208ENST00000520752 CCDC87Q9NVE4 849 aa10.07□□□□□ -0.8
SHPRH-208ENST00000520752 DCTN4Q9UJW0 460 aa10.07□□□□□ -0.8
SHPRH-208ENST00000520752 KCNH4Q9UQ05 1017 aa10.07□□□□□ -0.8
SHPRH-208ENST00000520752 LAMC1P11047 1609 aa10.07□□□□□ -0.8
SHPRH-208ENST00000520752 NDUFB5O43674 189 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 PDGFAP04085 211 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 RPLP1P05386 114 aaKnown RBP10.06□□□□□ -0.8
SHPRH-208ENST00000520752 USP5P45974 858 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 VEGFBP49765 207 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 MARSP56192 900 aaKnown RBP10.06□□□□□ -0.8
SHPRH-208ENST00000520752 ICA1Q05084 483 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 TRAF1Q13077 416 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 NEK11Q8NG66 645 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 GPR152Q8TDT2 470 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 DNAAF4Q8WXU2 420 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 EDEM1Q92611 657 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 ABHD17AQ96GS6 310 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 SRRTQ9BXP5 876 aaKnown RBP10.06□□□□□ -0.8
SHPRH-208ENST00000520752 ZSCAN16Q9H4T2 348 aaPredicted RBP10.06□□□□□ -0.8
SHPRH-208ENST00000520752 STK26Q9P289 416 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 HCN2Q9UL51 889 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 ADAMTS8Q9UP79 889 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 ANKRD50Q9ULJ7 1429 aa10.06□□□□□ -0.8
SHPRH-208ENST00000520752 DCDC2BA2VCK2 349 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 EIF3CLB5ME19 914 aaKnown RBP10.05□□□□□ -0.8
SHPRH-208ENST00000520752 COQ9O75208 318 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 BCAR3O75815 825 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 CT47B1P0C2W7 299 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-208ENST00000520752 PCSK2P16519 638 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 DNM1Q05193 864 aaKnown RBP10.05□□□□□ -0.8
SHPRH-208ENST00000520752 ADCY2Q08462 1091 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 SFSWAPQ12872 951 aaKnown RBP10.05□□□□□ -0.8
SHPRH-208ENST00000520752 PPP2R5AQ15172 486 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 ZC3H12AQ5D1E8 599 aaKnown RBP10.05□□□□□ -0.8
SHPRH-208ENST00000520752 DNAJC21Q5F1R6 531 aaKnown RBP10.05□□□□□ -0.8
SHPRH-208ENST00000520752 FAM182BQ5T319 152 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 TTLL5Q6EMB2 1281 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 RGL4Q8IZJ4 473 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 C17orf53Q8N3J3 647 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-208ENST00000520752 SLC16A10Q8TF71 515 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 EIF3CQ99613 913 aaKnown RBP10.05□□□□□ -0.8
SHPRH-208ENST00000520752 RBCK1Q9BYM8 510 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 TMX4Q9H1E5 349 aaPredicted RBP10.05□□□□□ -0.8
SHPRH-208ENST00000520752 MARK1Q9P0L2 795 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 LCMT1Q9UIC8 334 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 POLIQ9UNA4 740 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 KCNMB2Q9Y691 235 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 UGGT2Q9NYU1 1516 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 CFAP74Q9C0B2 1584 aa10.05□□□□□ -0.8
SHPRH-208ENST00000520752 ATP10AO60312 1499 aa10.04□□□□□ -0.8
SHPRH-208ENST00000520752 EGFRP00533 1210 aa10.04□□□□□ -0.8
SHPRH-208ENST00000520752 MX1P20591 662 aa10.04□□□□□ -0.8
SHPRH-208ENST00000520752 CDC25BP30305 580 aa10.04□□□□□ -0.8
SHPRH-208ENST00000520752 CRYMQ14894 314 aa10.04□□□□□ -0.8
SHPRH-208ENST00000520752 SART3Q15020 963 aaKnown RBP10.04□□□□□ -0.8
SHPRH-208ENST00000520752 TPD52L1Q16890 204 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-208ENST00000520752 GIMAP7Q8NHV1 300 aa10.04□□□□□ -0.8
SHPRH-208ENST00000520752 MIEF2Q96C03 454 aa10.04□□□□□ -0.8
SHPRH-208ENST00000520752 NUDT16Q96DE0 195 aaKnown RBP10.04□□□□□ -0.8
SHPRH-208ENST00000520752 DDX11Q96FC9 970 aa10.04□□□□□ -0.8
SHPRH-208ENST00000520752 L2HGDHQ9H9P8 463 aa10.04□□□□□ -0.8
SHPRH-208ENST00000520752 STRN4Q9NRL3 753 aa10.04□□□□□ -0.8
SHPRH-208ENST00000520752 GNL3LQ9NVN8 582 aaKnown RBP10.04□□□□□ -0.8
SHPRH-208ENST00000520752 ZNF215Q9UL58 517 aaPredicted RBP10.04□□□□□ -0.8
SHPRH-208ENST00000520752 GPR25O00155 361 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 SETSIPP0DME0 302 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 FGFR3P22607 806 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 RWDD2BP57060 319 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 NEDD9Q14511 834 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 MVPQ14764 893 aaKnown RBP10.03□□□□□ -0.8
SHPRH-208ENST00000520752 AP1ARQ63HQ0 302 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 CCDC186Q7Z3E2 898 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 TADA2BQ86TJ2 420 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 GJD3Q8N144 294 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 CMTR1Q8N1G2 835 aaKnown RBP10.03□□□□□ -0.8
SHPRH-208ENST00000520752 GPR161Q8N6U8 529 aaKnown RBP10.03□□□□□ -0.8
SHPRH-208ENST00000520752 SMARCE1Q969G3 411 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 SH3GL3Q99963 347 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 SUDS3Q9H7L9 328 aaPredicted RBP10.03□□□□□ -0.8
SHPRH-208ENST00000520752 IFT57Q9NWB7 429 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 ETAA1Q9NY74 926 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 TRAK1Q9UPV9 953 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 FNDC3AQ9Y2H6 1198 aaKnown RBP10.03□□□□□ -0.8
SHPRH-208ENST00000520752 USP20Q9Y2K6 914 aa10.03□□□□□ -0.8
SHPRH-208ENST00000520752 CAVIN2O95810 425 aa10.02□□□□□ -0.81
SHPRH-208ENST00000520752 MAPK1P28482 360 aa10.02□□□□□ -0.81
SHPRH-208ENST00000520752 NFX1Q12986 1120 aaKnown RBP10.02□□□□□ -0.81
SHPRH-208ENST00000520752 PTPN14Q15678 1187 aa10.02□□□□□ -0.81
SHPRH-208ENST00000520752 TEX11Q8IYF3 940 aa10.02□□□□□ -0.81
SHPRH-208ENST00000520752 PANK1Q8TE04 598 aa10.02□□□□□ -0.81
SHPRH-208ENST00000520752 CARD11Q9BXL7 1154 aa10.02□□□□□ -0.81
SHPRH-208ENST00000520752 CLIP2Q9UDT6 1046 aa10.02□□□□□ -0.81
SHPRH-208ENST00000520752 ANAPC4Q9UJX5 808 aa10.02□□□□□ -0.81
SHPRH-208ENST00000520752 CCDC141Q6ZP82 1450 aa10.02□□□□□ -0.81
SHPRH-208ENST00000520752 COL17A1Q9UMD9 1497 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms