RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 MAP3K11Q16584 847 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 FBXO18Q8NFZ0 1043 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 IGDCC4Q8TDY8 1250 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 ARHGEF1Q92888 912 aaKnown RBP11.61□□□□□ -0.55
SPARC-202ENST00000520687 C8orf76Q96K31 380 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 BRIP1Q9BX63 1249 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 NUP62CLQ9H1M0 184 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 RNF181Q9P0P0 153 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 ORC3Q9UBD5 711 aaPredicted RBP11.61□□□□□ -0.55
SPARC-202ENST00000520687 HPS5Q9UPZ3 1129 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 LEMD3Q9Y2U8 911 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 A0A1B0GUL6 1792 aa11.61□□□□□ -0.55
SPARC-202ENST00000520687 A0A0G2JLW4 131 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 ERICH2A1L162 156 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 ZBTB43O43298 467 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 HIBADHP31937 336 aaKnown RBP11.6□□□□□ -0.55
SPARC-202ENST00000520687 TDO2P48775 406 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 METAP2P50579 478 aaKnown RBP eCLIP11.6□□□□□ -0.55
SPARC-202ENST00000520687 TMEM67Q5HYA8 995 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 C15orf52Q6ZUT6 534 aaKnown RBP11.6□□□□□ -0.55
SPARC-202ENST00000520687 CERS3Q8IU89 383 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 TBC1D10CQ8IV04 446 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 FAM84BQ96KN1 310 aaPredicted RBP11.6□□□□□ -0.55
SPARC-202ENST00000520687 ARMT1Q9H993 441 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 WBP1LQ9NX94 342 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 RTEL1Q9NZ71 1219 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 RAI14Q9P0K7 980 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 DOCK2Q92608 1830 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 STK36Q9NRP7 1315 aa11.6□□□□□ -0.55
SPARC-202ENST00000520687 KIF13BQ9NQT8 1826 aa11.59□□□□□ -0.55
SPARC-202ENST00000520687 ESPNB1AK53 854 aa11.59□□□□□ -0.55
SPARC-202ENST00000520687 YEATS4O95619 227 aa11.59□□□□□ -0.55
SPARC-202ENST00000520687 FDPSP14324 419 aaKnown RBP11.59□□□□□ -0.55
SPARC-202ENST00000520687 ADD1P35611 737 aaKnown RBP11.59□□□□□ -0.55
SPARC-202ENST00000520687 PRPF38BQ5VTL8 546 aaKnown RBP11.59□□□□□ -0.55
SPARC-202ENST00000520687 APOA5Q6Q788 366 aa11.59□□□□□ -0.55
SPARC-202ENST00000520687 BICDL1Q6ZP65 573 aa11.59□□□□□ -0.55
SPARC-202ENST00000520687 RBM43Q6ZSC3 357 aaKnown RBP11.59□□□□□ -0.55
SPARC-202ENST00000520687 CHST3Q7LGC8 479 aa11.59□□□□□ -0.55
SPARC-202ENST00000520687 CLSTN2Q9H4D0 955 aa11.59□□□□□ -0.55
SPARC-202ENST00000520687 NCOA5Q9HCD5 579 aaKnown RBP11.59□□□□□ -0.55
SPARC-202ENST00000520687 TFIP11Q9UBB9 837 aaKnown RBP11.59□□□□□ -0.55
SPARC-202ENST00000520687 A0A1W2PQ27 194 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 A0A1W2PQ64 194 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 A0A1W2PQD8 194 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 CCDC69A6NI79 296 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 IFIT3O14879 490 aaKnown RBP11.58□□□□□ -0.55
SPARC-202ENST00000520687 HSPA8P11142 646 aaKnown RBP11.58□□□□□ -0.55
SPARC-202ENST00000520687 NFXL1Q6ZNB6 911 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 C3orf67Q6ZVT6 689 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 KCNG4Q8TDN1 519 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 ESR2Q92731 530 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 CELF1Q92879 486 aaKnown RBP11.58□□□□□ -0.55
SPARC-202ENST00000520687 FUCA2Q9BTY2 467 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 TNMDQ9H2S6 317 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 LY9Q9HBG7 655 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 EPB41L4AQ9HCS5 686 aaPredicted RBP11.58□□□□□ -0.55
SPARC-202ENST00000520687 CCDC39Q9UFE4 941 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 SLC12A7Q9Y666 1083 aa11.58□□□□□ -0.55
SPARC-202ENST00000520687 LAMA4Q16363 1823 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 PDE4DIPQ5VU43 2346 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 TIAM2Q8IVF5 1701 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 KIAA1551Q9HCM1 1747 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 B4E1Z4 1266 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 SLC3A2P08195 630 aaKnown RBP11.58□□□□□ -0.56
SPARC-202ENST00000520687 TM4SF1P30408 202 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 GYG1P46976 350 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 TRIM29Q14134 588 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 CCDC73Q6ZRK6 1079 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 CYB5R4Q7L1T6 521 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 TMC4Q7Z404 712 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 ZSCAN30Q86W11 494 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 LCORLQ8N3X6 602 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 BICD2Q8TD16 824 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 POLR3EQ9NVU0 708 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 ZSWIM5Q9P217 1185 aa11.58□□□□□ -0.56
SPARC-202ENST00000520687 SRP68Q9UHB9 627 aaKnown RBP11.58□□□□□ -0.56
SPARC-202ENST00000520687 ARFGEF1Q9Y6D6 1849 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 GOLGA8AA7E2F4 631 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 SNAP23O00161 211 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 NPHP1O15259 732 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 FGRP09769 529 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 IFNAR1P17181 557 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 IARSP41252 1262 aaKnown RBP11.57□□□□□ -0.56
SPARC-202ENST00000520687 GSTO1P78417 241 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 PPARAQ07869 468 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 GRAPQ13588 217 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 CNBD1Q8NA66 436 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 WDR66Q8TBY9 1149 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 GRAPLQ8TC17 118 aaPredicted RBP11.57□□□□□ -0.56
SPARC-202ENST00000520687 RIOK1Q9BRS2 568 aaKnown RBP11.57□□□□□ -0.56
SPARC-202ENST00000520687 CRNKL1Q9BZJ0 848 aaKnown RBP11.57□□□□□ -0.56
SPARC-202ENST00000520687 ATP8A2Q9NTI2 1148 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 ABCF2Q9UG63 623 aa11.57□□□□□ -0.56
SPARC-202ENST00000520687 KDM4AO75164 1064 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 TPM3P06753 285 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 CALM1P0DP23 149 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 CALM2P0DP24 149 aa11.56□□□□□ -0.56
SPARC-202ENST00000520687 CALM3P0DP25 149 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms