RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 NOGQ13253 232 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 MAP3K11Q16584 847 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 KIF4BQ2VIQ3 1234 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 CREB3L3Q68CJ9 461 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 C2orf69Q8N8R5 385 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 PLBD2Q8NHP8 589 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 SP7Q8TDD2 431 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 NUP62CLQ9H1M0 184 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 GBA2Q9HCG7 927 aaPredicted RBP10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 ANKIB1Q9P2G1 1089 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 PGAP2Q9UHJ9 254 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 SCAF8Q9UPN6 1271 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 MTMR6Q9Y217 621 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 MAP3K2Q9Y2U5 619 aa10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 RBM8AQ9Y5S9 174 aaKnown RBP10.15□□□□□ -0.78
CTNNA1-223ENST00000520520 MED23Q9ULK4 1368 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 LRRC37AA6NMS7 1700 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 TTLL13PA6NNM8 815 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 IRS4O14654 1257 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 TRPA1O75762 1119 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 UFL1O94874 794 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 TIE1P35590 1138 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 SOX10P56693 466 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 KIF23Q02241 960 aaPredicted RBP10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 RGMBQ6NW40 437 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 TMC4Q7Z404 712 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 RIC3Q7Z5B4 369 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 MYRIPQ8NFW9 859 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 FAM200AQ8TCP9 573 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 FBXW7Q969H0 707 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 EYA3Q99504 573 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 FSD1Q9BTV5 496 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 TMEM106CQ9BVX2 250 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 GDPD2Q9HCC8 539 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 SEC31BQ9NQW1 1179 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 GGA3Q9NZ52 723 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 POLR2AP24928 1970 aaKnown RBP10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 RTL9Q8NET4 1388 aa10.14□□□□□ -0.79
CTNNA1-223ENST00000520520 NECTIN1Q15223 517 aa10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 LARP1BQ659C4 914 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 SULF1Q8IWU6 871 aa10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 TBC1D16Q8TBP0 767 aa10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 DPF2Q92785 391 aa10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 MAP4K1Q92918 833 aa10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 HHIPL1Q96JK4 782 aa10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 MYD88Q99836 296 aa10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 ISCA1Q9BUE6 129 aa10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 ZC3H12CQ9C0D7 883 aaKnown RBP10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 SPTLC3Q9NUV7 552 aa10.13□□□□□ -0.79
CTNNA1-223ENST00000520520 HMGB1P09429 215 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 RPS6KB1P23443 525 aa10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 RPS8P62241 208 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 NMIQ13287 307 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 NOLC1Q14978 699 aaKnown RBP eCLIP10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 SF3B3Q15393 1217 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 TSGA10IPQ3SY00 556 aa10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 FOXD4L6Q3SYB3 417 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 ANGEL2Q5VTE6 544 aaKnown RBP10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 FOXD4L3Q6VB84 417 aaPredicted RBP10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 IL25Q9H293 177 aa10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 FAM13BQ9NYF5 915 aa10.12□□□□□ -0.79
CTNNA1-223ENST00000520520 TNRC18O15417 2968 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 FAM155AB1AL88 458 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 SLC27A2O14975 620 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 CTAGE5O15320 804 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 SLC34A2O95436 690 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 RPS12P25398 132 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 GTF2F1P35269 517 aaKnown RBP eCLIP10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 DNM1Q05193 864 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 MKRN3Q13064 507 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 SCARF1Q14162 830 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 DHX8Q14562 1220 aaKnown RBP10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 PRAMEF18Q5VWM3 479 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 CDCA5Q96FF9 252 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 CHAMP1Q96JM3 812 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 FUCA2Q9BTY2 467 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 TNMDQ9H2S6 317 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 ZSCAN16Q9H4T2 348 aaPredicted RBP10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 RNF186Q9NXI6 227 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 GGA1Q9UJY5 639 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 CFAP45Q9UL16 551 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 SPEF2Q9C093 1822 aa10.11□□□□□ -0.79
CTNNA1-223ENST00000520520 SCN9AQ15858 1988 aa10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 ATMINO43313 823 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 GTPBP6O43824 516 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 PLCB2Q00722 1185 aa10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 PTH1RQ03431 593 aa10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 TTLL12Q14166 644 aaPredicted RBP10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 ME3Q16798 604 aa10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 LRRFIP1Q32MZ4 808 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 ATL3Q6DD88 541 aa10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 MOB2Q70IA6 237 aa10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 CCDC102AQ96A19 550 aa10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 SPATA32Q96LK8 384 aa10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 LLPHQ9BRT6 129 aaKnown RBP10.1□□□□□ -0.79
CTNNA1-223ENST00000520520 H3BQV1 296 aa10.09□□□□□ -0.79
CTNNA1-223ENST00000520520 LARGE1O95461 756 aa10.09□□□□□ -0.79
CTNNA1-223ENST00000520520 SLC10A3P09131 477 aa10.09□□□□□ -0.79
CTNNA1-223ENST00000520520 VIL1P09327 827 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms