RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 KIAA0825Q8IV33 1275 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 DNAJC5GQ8N7S2 189 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 AGBL3Q8NEM8 1001 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 SH3RF3Q8TEJ3 882 aaPredicted RBP10.14□□□□□ -0.79
VAPB-206ENST00000520497 TEKT1Q969V4 418 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 ZDHHC15Q96MV8 337 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 NACAP1Q9BZK3 213 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 NAPBQ9H115 298 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 ZSWIM6Q9HCJ5 1215 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 DCP1AQ9NPI6 582 aaPredicted RBP10.14□□□□□ -0.79
VAPB-206ENST00000520497 ATP8A2Q9NTI2 1148 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 SERPINA10Q9UK55 444 aa10.14□□□□□ -0.79
VAPB-206ENST00000520497 SCN4AP35499 1836 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 ATAD5Q96QE3 1844 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 SPDYE2BA6NHP3 402 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 APPP05067 770 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 SPDYE6P0CI01 402 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 LMNB1P20700 586 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 PSMA5P28066 241 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 TDO2P48775 406 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 COL9A3Q14050 684 aaPredicted RBP10.13□□□□□ -0.79
VAPB-206ENST00000520497 SPDYE2Q495Y8 402 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 APOBEC3HQ6NTF7 200 aaKnown RBP10.13□□□□□ -0.79
VAPB-206ENST00000520497 JAKMIP1Q96N16 626 aaKnown RBP10.13□□□□□ -0.79
VAPB-206ENST00000520497 TTC14Q96N46 770 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 NOL10Q9BSC4 688 aaKnown RBP10.13□□□□□ -0.79
VAPB-206ENST00000520497 TBC1D2Q9BYX2 928 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 UPF3BQ9BZI7 483 aaKnown RBP10.13□□□□□ -0.79
VAPB-206ENST00000520497 ANAPC4Q9UJX5 808 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 ROBO3Q96MS0 1386 aa10.13□□□□□ -0.79
VAPB-206ENST00000520497 POTECB2RU33 542 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 E7EWF7 191 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 ZNF213O14771 459 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 CASTP20810 708 aaKnown RBP10.12□□□□□ -0.79
VAPB-206ENST00000520497 MCM2P49736 904 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 NEK4P51957 841 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 HAND2P61296 217 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 EVX2Q03828 476 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 MKRN4PQ13434 485 aaPredicted RBP10.12□□□□□ -0.79
VAPB-206ENST00000520497 TNIP1Q15025 636 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 SBK1Q52WX2 424 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 TBC1D10CQ8IV04 446 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 ARPP21Q9UBL0 812 aaPredicted RBP10.12□□□□□ -0.79
VAPB-206ENST00000520497 TACC3Q9Y6A5 838 aa10.12□□□□□ -0.79
VAPB-206ENST00000520497 COL2A1P02458 1487 aaPredicted RBP10.11□□□□□ -0.79
VAPB-206ENST00000520497 FLT1P17948 1338 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 ZNF541Q9H0D2 1346 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 WDHD1O75717 1129 aaPredicted RBP10.11□□□□□ -0.79
VAPB-206ENST00000520497 HSP90AA1P07900 732 aaKnown RBP10.11□□□□□ -0.79
VAPB-206ENST00000520497 RPS6KB1P23443 525 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 RPS12P25398 132 aaKnown RBP10.11□□□□□ -0.79
VAPB-206ENST00000520497 MMP14P50281 582 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 PPARAQ07869 468 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 CDC42EP5Q6NZY7 148 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 CTR9Q6PD62 1173 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 BLOC1S2Q6QNY1 142 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 RUFY3Q7L099 469 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 TEX11Q8IYF3 940 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 MTMR14Q8NCE2 650 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 TGFBRAP1Q8WUH2 860 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 STAG1Q8WVM7 1258 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 NEK1Q96PY6 1258 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 ALDH8A1Q9H2A2 487 aaPredicted RBP10.11□□□□□ -0.79
VAPB-206ENST00000520497 PCDHAC2Q9Y5I4 1007 aa10.11□□□□□ -0.79
VAPB-206ENST00000520497 USP17L12C9JPN9 530 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 USP17L21D6R901 530 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 HMGB1P09429 215 aaKnown RBP10.1□□□□□ -0.79
VAPB-206ENST00000520497 FGRP09769 529 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 USP17L8P0C7I0 530 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 CPA1P15085 419 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 USP5P45974 858 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 APLP1P51693 650 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 EIF6P56537 245 aaKnown RBP10.1□□□□□ -0.79
VAPB-206ENST00000520497 CFAP100Q494V2 611 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 AKNAD1Q5T1N1 836 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 MB21D2Q8IYB1 491 aaPredicted RBP10.1□□□□□ -0.79
VAPB-206ENST00000520497 RBM46Q8TBY0 533 aaKnown RBP10.1□□□□□ -0.79
VAPB-206ENST00000520497 DPF2Q92785 391 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 ZBED3Q96IU2 234 aaPredicted RBP10.1□□□□□ -0.79
VAPB-206ENST00000520497 IDI2Q9BXS1 227 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 DDX4Q9NQI0 724 aaKnown RBP10.1□□□□□ -0.79
VAPB-206ENST00000520497 HDAC9Q9UKV0 1011 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 CYP46A1Q9Y6A2 500 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 WDR90Q96KV7 1748 aa10.1□□□□□ -0.79
VAPB-206ENST00000520497 NEDD4P46934 1319 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 WDR19Q8NEZ3 1342 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 CYP2D7A0A087X1C5 515 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 SMIM22K7EJ46 135 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 K7ELQ4 463 aaPredicted RBP10.09□□□□□ -0.79
VAPB-206ENST00000520497 AK2P54819 239 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 ZNF280AP59817 542 aaPredicted RBP10.09□□□□□ -0.79
VAPB-206ENST00000520497 EXOSC10Q01780 885 aaKnown RBP10.09□□□□□ -0.79
VAPB-206ENST00000520497 CTDSPL2Q05D32 466 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 C12orf60Q5U649 245 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 MAPKAPK5Q8IW41 473 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 FBXL16Q8N461 479 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 OGFOD1Q8N543 542 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 NCOA7Q8NI08 942 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 NKX2-3Q8TAU0 364 aa10.09□□□□□ -0.79
VAPB-206ENST00000520497 PRMT6Q96LA8 375 aaPredicted RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms