RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 NSFL1CQ9UNZ2 370 aaKnown RBP9.83□□□□□ -0.84
CTHRC1-203ENST00000520337 IGKV5-2P06315 115 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 GNAI3P08754 354 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 PHKA2P46019 1235 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 CWF19L2Q2TBE0 894 aaKnown RBP9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 EML3Q32P44 896 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 POTEAQ6S8J7 498 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 FAM196AQ6ZSG2 479 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 SMC5Q8IY18 1101 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 ANKRD44Q8N8A2 993 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 ENAMQ9NRM1 1142 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 PHF24Q9UPV7 400 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 ZBTB1Q9Y2K1 713 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 UTYO14607 1347 aa9.82□□□□□ -0.84
CTHRC1-203ENST00000520337 NEURL1BA8MQ27 555 aa9.81□□□□□ -0.84
CTHRC1-203ENST00000520337 GNAI2P04899 355 aa9.81□□□□□ -0.84
CTHRC1-203ENST00000520337 NBPF7P0C2Y1 421 aaPredicted RBP9.81□□□□□ -0.84
CTHRC1-203ENST00000520337 RXRBP28702 533 aa9.81□□□□□ -0.84
CTHRC1-203ENST00000520337 CEP85Q6P2H3 762 aa9.81□□□□□ -0.84
CTHRC1-203ENST00000520337 LYPD4Q6UWN0 246 aa9.81□□□□□ -0.84
CTHRC1-203ENST00000520337 SKAP1Q86WV1 359 aa9.81□□□□□ -0.84
CTHRC1-203ENST00000520337 RPAP2Q8IXW5 612 aaPredicted RBP9.81□□□□□ -0.84
CTHRC1-203ENST00000520337 PGBD3Q8N328 593 aa9.81□□□□□ -0.84
CTHRC1-203ENST00000520337 CCDC87Q9NVE4 849 aa9.81□□□□□ -0.84
CTHRC1-203ENST00000520337 STAU1O95793 577 aaKnown RBP9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 CELA2BP08218 269 aaPredicted RBP9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 MX2P20592 715 aa9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 IL6STP40189 918 aaPredicted RBP9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 CRKLP46109 303 aaKnown RBP9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 EIF5P55010 431 aaKnown RBP9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 LINC00116Q8NCU8 138 aa9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 POM121Q96HA1 1249 aa9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 MYD88Q99836 296 aa9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 GPAMQ9HCL2 828 aa9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 LRRC4BQ9NT99 713 aa9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 LRRFIP2Q9Y608 721 aaKnown RBP9.8□□□□□ -0.84
CTHRC1-203ENST00000520337 BCORQ6W2J9 1755 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 GRM8O00222 908 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 PIK3CDO00329 1044 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 UBTFL1P0CB47 393 aaPredicted RBP9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 SKIP12755 728 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 SMTNP53814 917 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 KCNQ4P56696 695 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 ATP8B2P98198 1209 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 GCKRQ14397 625 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 EFHC2Q5JST6 749 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 ERICH6Q7L0X2 663 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 C1orf216Q8TAB5 229 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 KAZALD1Q96I82 304 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 ISCA1Q9BUE6 129 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 NOD1Q9Y239 953 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 RBM19Q9Y4C8 960 aaKnown RBP9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 MAP3K15Q6ZN16 1313 aa9.79□□□□□ -0.84
CTHRC1-203ENST00000520337 THBS1P07996 1170 aa9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 MSX1P28360 303 aa9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 MARSP56192 900 aaKnown RBP9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 NEXNQ0ZGT2 675 aa9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 TCIRG1Q13488 830 aa9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 TBC1D9Q6ZT07 1266 aa9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 SCARF2Q96GP6 870 aaPredicted RBP9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 NIFKQ9BYG3 293 aaKnown RBP9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 CRISPLD1Q9H336 500 aa9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 DCTPP1Q9H773 170 aa9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 C9orf78Q9NZ63 289 aaPredicted RBP9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 UBR3Q6ZT12 1888 aa9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 CNTNAP4Q9C0A0 1308 aa9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 MYH3P11055 1940 aa9.78□□□□□ -0.84
CTHRC1-203ENST00000520337 C4BP0C0L5 1744 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 TNS1Q9HBL0 1735 aaKnown RBP9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 PNMA6EA0A0J9YXQ4 647 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 ERVV-1B6SEH8 477 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 TRIM37O94972 964 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 MAP2K3P46734 347 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 CASP7P55210 303 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 TRIM28Q13263 835 aaKnown RBP9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 MTFR1Q15390 333 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 HLFQ16534 295 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 KIF6Q6ZMV9 814 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 GCC1Q96CN9 775 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 CCNL1Q9UK58 526 aaPredicted RBP9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 PCDHGA11Q9Y5H2 935 aa9.77□□□□□ -0.85
CTHRC1-203ENST00000520337 COL15A1P39059 1388 aa9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 TMEM229AB2RXF0 380 aa9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 BCRP11274 1271 aa9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 NUCB1Q02818 461 aa9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 MTX1Q13505 466 aa9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 UBAP2LQ14157 1087 aaKnown RBP9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 PPP1R42Q7Z4L9 355 aa9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 CCDC191Q8NCU4 936 aa9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 SSH3Q8TE77 659 aa9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 JARID2Q92833 1246 aaPredicted RBP9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 SUCLG2Q96I99 432 aa9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 CWC25Q9NXE8 425 aaPredicted RBP9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 C4AP0C0L4 1744 aa9.76□□□□□ -0.85
CTHRC1-203ENST00000520337 A6NJY4 79 aa9.75□□□□□ -0.85
CTHRC1-203ENST00000520337 CDK2AP1O14519 115 aa9.75□□□□□ -0.85
CTHRC1-203ENST00000520337 BACH1O14867 736 aa9.75□□□□□ -0.85
CTHRC1-203ENST00000520337 CAMTA2O94983 1202 aa9.75□□□□□ -0.85
CTHRC1-203ENST00000520337 PLA2G4AP47712 749 aa9.75□□□□□ -0.85
CTHRC1-203ENST00000520337 NCOA4Q13772 614 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms