RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 CHL1O00533 1208 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 FRAT2O75474 233 aaPredicted RBP6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 CYP2B6P20813 491 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 HIBADHP31937 336 aaKnown RBP6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 ATN1P54259 1190 aaPredicted RBP6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 CACNB3P54284 484 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 RTP1P59025 263 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 TRIM32Q13049 653 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 DDX60LQ5H9U9 1706 aaKnown RBP6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 CCDC174Q6PII3 467 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 VPS37DQ86XT2 251 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 CCAR1Q8IX12 1150 aaKnown RBP6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 SCYL3Q8IZE3 742 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 PROCA1Q8NCQ7 364 aaPredicted RBP6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 BADQ92934 168 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 KCNH6Q9H252 994 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 CXXC1Q9P0U4 656 aaPredicted RBP6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 GJD2Q9UKL4 321 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 ATP11BQ9Y2G3 1177 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 LAS1LQ9Y4W2 734 aaKnown RBP6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 CDH23Q9H251 3354 aa6.29□□□□□ -1.4
AC055854.1-202ENST00000519624 CCER2I3L3R5 266 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 TAF5LO75529 589 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 PTPRAP18433 802 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 RGS2P41220 211 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 CACNB2Q08289 660 aaPredicted RBP6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 IFIT5Q13325 482 aaKnown RBP6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 KRT24Q2M2I5 525 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 TAF7LQ5H9L4 462 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 LHX8Q68G74 356 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 POTEEQ6S8J3 1075 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 TDRD7Q8NHU6 1098 aaKnown RBP6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 LPAR1Q92633 364 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 PLA2G12BQ9BX93 195 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 TBC1D2Q9BYX2 928 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 CWC22Q9HCG8 908 aaKnown RBP6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 SPINK5Q9NQ38 1064 aaPredicted RBP6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 SUGT1Q9Y2Z0 365 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 AFG3L2Q9Y4W6 797 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 LRRFIP2Q9Y608 721 aaKnown RBP6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 LAMA2P24043 3122 aaKnown RBP6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 ALPK3Q96L96 1907 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 ARAP2Q8WZ64 1704 aa6.28□□□□□ -1.4
AC055854.1-202ENST00000519624 TRIM75PA6NK02 468 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 KBTBD13C9JR72 458 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 SMIM22K7EJ46 135 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 CSF1RP07333 972 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 BMP1P13497 986 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 IGFBP4P22692 258 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 MAPK4P31152 587 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 UBE4AQ14139 1066 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 CCDC85BQ15834 202 aaPredicted RBP6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 DUSP27Q5VZP5 1158 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 MFSD14CQ5VZR4 134 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 CCDC129Q6ZRS4 1044 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 UBE3BQ7Z3V4 1068 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 ARRDC4Q8NCT1 418 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 PHAXQ9H814 394 aaKnown RBP6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 MAP3K2Q9Y2U5 619 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 TACC3Q9Y6A5 838 aa6.27□□□□□ -1.41
AC055854.1-202ENST00000519624 PRR33A8MZF0 331 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 H7C1W4 665 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 SNAP23O00161 211 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 PLIN1O60240 522 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 CTNND1O60716 968 aaKnown RBP6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 GLRX3O76003 335 aaKnown RBP6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 CNGA1P29973 690 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 CCND3P30281 292 aaPredicted RBP6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 TMPOP42166 694 aaKnown RBP6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 FPGSQ05932 587 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 TCP10Q12799 353 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 SKIV2LQ15477 1246 aaKnown RBP6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 CSPP1Q1MSJ5 1256 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 CCDC57Q2TAC2 916 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 CAVIN4Q5BKX8 364 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 APOBEC3HQ6NTF7 200 aaKnown RBP6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 HHIPL2Q6UWX4 724 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 KSR2Q6VAB6 950 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 SLC39A5Q6ZMH5 540 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 LDHAL6AQ6ZMR3 332 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 GTF3C2Q8WUA4 911 aaPredicted RBP6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 APBA2Q99767 749 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 EPHX3Q9H6B9 360 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 MYH16Q9H6N6 1097 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 TSHZ2Q9NRE2 1034 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 CNNM1Q9NRU3 951 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 MORF4L1Q9UBU8 362 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 DDX20Q9UHI6 824 aaKnown RBP6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 CHMP3Q9Y3E7 222 aa6.26□□□□□ -1.41
AC055854.1-202ENST00000519624 NEURL1BA8MQ27 555 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 ERC2O15083 957 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 IGKV5-2P06315 115 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 RAG1P15918 1043 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 IRX3P78415 501 aaPredicted RBP6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 CHAF1AQ13111 956 aaPredicted RBP6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 RAB30Q15771 203 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 C1orf53Q5VUE5 145 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 CCDC30Q5VVM6 783 aa6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 ZSCAN29Q8IWY8 852 aaPredicted RBP6.25□□□□□ -1.41
AC055854.1-202ENST00000519624 GPRC5AQ8NFJ5 357 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms