RNA–Protein interactions for RNA: ENST00000519259.5

SREK1-206, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 9,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-206ENST00000519259 PDCP20941 246 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 CERKLQ49MI3 558 aaPredicted RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 TBC1D10BQ4KMP7 808 aaPredicted RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 EAF2Q96CJ1 260 aaPredicted RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 CDCA5Q96FF9 252 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 SPINK5Q9NQ38 1064 aaPredicted RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 GGA3Q9NZ52 723 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 MRPL11Q9Y3B7 192 aaKnown RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 GTPBP4Q9BZE4 634 aaKnown RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 MINDY4BA8MYZ0 360 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 CTCFP49711 727 aaPredicted RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 HMGN5P82970 282 aaKnown RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 PICALMQ13492 652 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 WWC2Q6AWC2 1192 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 HSCBQ8IWL3 235 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 SMCR8Q8TEV9 937 aaPredicted RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 C7orf43Q8WVR3 580 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 JARID2Q92833 1246 aaPredicted RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 WDR18Q9BV38 432 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 MAP3K20Q9NYL2 800 aaKnown RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 PSMD14O00487 310 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 SDSP20132 328 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 BCAMP50895 628 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 SCARF1Q14162 830 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 RABEP1Q15276 862 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 TAF1CQ15572 869 aaPredicted RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 PKN2Q16513 984 aaKnown RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 NEDD1Q8NHV4 660 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 PUS3Q9BZE2 481 aaKnown RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 NAP1L2Q9ULW6 460 aaPredicted RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 SPDYE2BA6NHP3 402 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 TCP10L2B9ZVM9 353 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 BAG4O95429 457 aaKnown RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 SPDYE6P0CI01 402 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 ADD2P35612 726 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 FCGRTP55899 365 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 PYM1Q9BRP8 204 aaKnown RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 RAB34Q9BZG1 259 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 TM6SF1Q9BZW5 370 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 LRRC27Q9C0I9 530 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 NRBP1Q9UHY1 535 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 GAKO14976 1311 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 IFIT3O14879 490 aaKnown RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 WDR46O15213 610 aaKnown RBP4.47□□□□□ -1.69
SREK1-206ENST00000519259 CCDC96Q2M329 555 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 GOPCQ9HD26 462 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 PGAP2Q9UHJ9 254 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 DAGLAQ9Y4D2 1042 aa4.47□□□□□ -1.69
SREK1-206ENST00000519259 CELF2O95319 508 aaKnown RBP4.46□□□□□ -1.69
SREK1-206ENST00000519259 PDE6AP16499 860 aa4.46□□□□□ -1.69
SREK1-206ENST00000519259 PPIL2Q13356 520 aa4.46□□□□□ -1.69
SREK1-206ENST00000519259 DNAI2Q9GZS0 605 aa4.46□□□□□ -1.69
SREK1-206ENST00000519259 C6orf50Q9HD87 102 aa4.46□□□□□ -1.69
SREK1-206ENST00000519259 TOP1P11387 765 aaKnown RBP4.46□□□□□ -1.69
SREK1-206ENST00000519259 NBPF11Q86T75 865 aa4.46□□□□□ -1.69
SREK1-206ENST00000519259 STAG1Q8WVM7 1258 aa4.46□□□□□ -1.69
SREK1-206ENST00000519259 ZNF594Q96JF6 807 aaPredicted RBP4.46□□□□□ -1.69
SREK1-206ENST00000519259 CDHR1Q96JP9 859 aa4.46□□□□□ -1.69
SREK1-206ENST00000519259 SEC63Q9UGP8 760 aaKnown RBP4.46□□□□□ -1.69
SREK1-206ENST00000519259 CCDC171Q6TFL3 1326 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 COL22A1Q8NFW1 1626 aaPredicted RBP4.46□□□□□ -1.7
SREK1-206ENST00000519259 ASB14A6NK59 587 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 RAD21O60216 631 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 ABCB5Q2M3G0 1257 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 GNPTABQ3T906 1256 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 ZNF526Q8TF50 670 aaPredicted RBP4.46□□□□□ -1.7
SREK1-206ENST00000519259 KIF1BO60333 1816 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 PHKA1P46020 1223 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 LRP10Q7Z4F1 713 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 TDRD3Q9H7E2 651 aaKnown RBP4.46□□□□□ -1.7
SREK1-206ENST00000519259 NUCB1Q02818 461 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 PTF1AQ7RTS3 328 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 EXOC8Q8IYI6 725 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 JMYQ8N9B5 988 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 DEFB129Q9H1M3 183 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 CALML3P27482 149 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 MCM5P33992 734 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 GALNT17Q6IS24 598 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 CCDC43Q96MW1 224 aaKnown RBP4.46□□□□□ -1.7
SREK1-206ENST00000519259 SH2B1Q9NRF2 756 aaPredicted RBP4.46□□□□□ -1.7
SREK1-206ENST00000519259 RANBP6O60518 1105 aaKnown RBP4.46□□□□□ -1.7
SREK1-206ENST00000519259 NLGN2Q8NFZ4 835 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 NEK1Q96PY6 1258 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 JPH2Q9BR39 696 aaPredicted RBP4.46□□□□□ -1.7
SREK1-206ENST00000519259 C1orf115Q9H7X2 142 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 SLC45A1Q9Y2W3 748 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 WTAPQ15007 396 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 ZMYM1Q5SVZ6 1142 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 TTC22Q5TAA0 569 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 MAGEB6Q8N7X4 407 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 CSRNP1Q96S65 589 aa4.46□□□□□ -1.7
SREK1-206ENST00000519259 BIN2Q9UBW5 565 aaPredicted RBP4.46□□□□□ -1.7
SREK1-206ENST00000519259 SPDYE5A6NIY4 337 aa4.45□□□□□ -1.7
SREK1-206ENST00000519259 STRNO43815 780 aa4.45□□□□□ -1.7
SREK1-206ENST00000519259 MSCO60682 206 aa4.45□□□□□ -1.7
SREK1-206ENST00000519259 SMARCA1P28370 1054 aa4.45□□□□□ -1.7
SREK1-206ENST00000519259 ZRSR1Q15695 479 aaKnown RBP4.45□□□□□ -1.7
SREK1-206ENST00000519259 KCNV1Q6PIU1 500 aa4.45□□□□□ -1.7
SREK1-206ENST00000519259 IFNL3Q8IZI9 196 aa4.45□□□□□ -1.7
SREK1-206ENST00000519259 KCNH4Q9UQ05 1017 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms