RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 LMNB1P20700 586 aa17.11■□□□□ 0.33
CLN8-204ENST00000519254 CRKP46108 304 aa17.11■□□□□ 0.33
CLN8-204ENST00000519254 TCHHQ07283 1943 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 EIF6P56537 245 aaKnown RBP17.1■□□□□ 0.33
CLN8-204ENST00000519254 FAM163AQ96GL9 167 aaPredicted RBP17.1■□□□□ 0.33
CLN8-204ENST00000519254 LRRC2Q9BYS8 371 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 SMC3Q9UQE7 1217 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 PCDHAC2Q9Y5I4 1007 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 GJA3Q9Y6H8 435 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 SRCAPQ6ZRS2 3230 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 USP5P45974 858 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 TNIP1Q15025 636 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 ALX1Q15699 326 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 HHIPL2Q6UWX4 724 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 AGXT2Q9BYV1 514 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 NBPF3Q9H094 633 aa17.1■□□□□ 0.33
CLN8-204ENST00000519254 FZD9O00144 591 aa17.09■□□□□ 0.33
CLN8-204ENST00000519254 ZNF213O14771 459 aa17.09■□□□□ 0.33
CLN8-204ENST00000519254 PPP4CP60510 307 aa17.09■□□□□ 0.33
CLN8-204ENST00000519254 TEX11Q8IYF3 940 aa17.09■□□□□ 0.33
CLN8-204ENST00000519254 ZNF541Q9H0D2 1346 aa17.09■□□□□ 0.33
CLN8-204ENST00000519254 TRAK2O60296 914 aa17.08■□□□□ 0.33
CLN8-204ENST00000519254 DTNBO60941 627 aa17.08■□□□□ 0.33
CLN8-204ENST00000519254 PLCG2P16885 1265 aa17.08■□□□□ 0.33
CLN8-204ENST00000519254 FOXD4L5Q5VV16 416 aaPredicted RBP17.08■□□□□ 0.33
CLN8-204ENST00000519254 TGFBRAP1Q8WUH2 860 aa17.08■□□□□ 0.33
CLN8-204ENST00000519254 FOXD4L4Q8WXT5 416 aaPredicted RBP17.08■□□□□ 0.33
CLN8-204ENST00000519254 BRF1Q92994 677 aa17.08■□□□□ 0.33
CLN8-204ENST00000519254 GMLQ99445 158 aa17.08■□□□□ 0.33
CLN8-204ENST00000519254 RNF181Q9P0P0 153 aa17.08■□□□□ 0.33
CLN8-204ENST00000519254 SBF1O95248 1867 aa17.08■□□□□ 0.32
CLN8-204ENST00000519254 ZMYM6O95789 1325 aa17.08■□□□□ 0.32
CLN8-204ENST00000519254 BAZ2AQ9UIF9 1905 aaKnown RBP17.08■□□□□ 0.32
CLN8-204ENST00000519254 GJB2P29033 226 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 RHBDL3P58872 404 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 CFAP100Q494V2 611 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 CERS3Q8IU89 383 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 MAPKAPK5Q8IW41 473 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 STK11IPQ8N1F8 1099 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 OGFOD1Q8N543 542 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 AGBL3Q8NEM8 1001 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 ZDHHC15Q96MV8 337 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 USP40Q9NVE5 1235 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 SERPINA10Q9UK55 444 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 HDAC9Q9UKV0 1011 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 MINDY4BA8MYZ0 360 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 USP17L8P0C7I0 530 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 SYT1P21579 422 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 HDLBPQ00341 1268 aaKnown RBP17.07■□□□□ 0.32
CLN8-204ENST00000519254 APOBEC3HQ6NTF7 200 aaKnown RBP17.07■□□□□ 0.32
CLN8-204ENST00000519254 CHST3Q7LGC8 479 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 MB21D2Q8IYB1 491 aaPredicted RBP17.07■□□□□ 0.32
CLN8-204ENST00000519254 FBXL16Q8N461 479 aa17.07■□□□□ 0.32
CLN8-204ENST00000519254 DCP1AQ9NPI6 582 aaPredicted RBP17.07■□□□□ 0.32
CLN8-204ENST00000519254 WDR33Q9C0J8 1336 aaKnown RBP17.07■□□□□ 0.32
CLN8-204ENST00000519254 DICER1Q9UPY3 1922 aaKnown RBP17.07■□□□□ 0.32
CLN8-204ENST00000519254 CYP2D7A0A087X1C5 515 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 CTDSPL2Q05D32 466 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 STK3Q13188 491 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 PICALMQ13492 652 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 GSE1Q14687 1217 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 GTF3C6Q969F1 213 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 CHAMP1Q96JM3 812 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 ATP8A2Q9NTI2 1148 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 MCM9Q9NXL9 1143 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 TIAM2Q8IVF5 1701 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 CDK5RAP2Q96SN8 1893 aa17.06■□□□□ 0.32
CLN8-204ENST00000519254 SHTN1A0MZ66 631 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 PTMSP20962 102 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 DEKP35659 375 aaKnown RBP17.05■□□□□ 0.32
CLN8-204ENST00000519254 GMPSP49915 693 aaPredicted RBP17.05■□□□□ 0.32
CLN8-204ENST00000519254 FGD1P98174 961 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 APOBRQ0VD83 1088 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 C9orf131Q5VYM1 1079 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 MCTP1Q6DN14 999 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 CDC42EP5Q6NZY7 148 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 TBC1D10CQ8IV04 446 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 NCOA7Q8NI08 942 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 MRIQ9BWK5 157 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 SAP30BPQ9UHR5 308 aaKnown RBP17.05■□□□□ 0.32
CLN8-204ENST00000519254 NAV1Q8NEY1 1877 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 USP17L12C9JPN9 530 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 USP17L21D6R901 530 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 GOLGA6L22H0YM25 854 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 STX6O43752 255 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 CACNB3P54284 484 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 ANTXR2P58335 489 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 GIMAP6Q6P9H5 292 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 CTR9Q6PD62 1173 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 FLT1P17948 1338 aa17.05■□□□□ 0.32
CLN8-204ENST00000519254 SMIM22K7EJ46 135 aa17.04■□□□□ 0.32
CLN8-204ENST00000519254 PFKFB2O60825 505 aa17.04■□□□□ 0.32
CLN8-204ENST00000519254 CYP2D6P10635 497 aa17.04■□□□□ 0.32
CLN8-204ENST00000519254 MCM5P33992 734 aa17.04■□□□□ 0.32
CLN8-204ENST00000519254 PPARAQ07869 468 aa17.04■□□□□ 0.32
CLN8-204ENST00000519254 DLGAP5Q15398 846 aa17.04■□□□□ 0.32
CLN8-204ENST00000519254 NKX2-3Q8TAU0 364 aa17.04■□□□□ 0.32
CLN8-204ENST00000519254 WDR19Q8NEZ3 1342 aa17.03■□□□□ 0.32
CLN8-204ENST00000519254 PRC1O43663 620 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms