RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 DCDC2CA8MYV0 355 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 F6X3S4 739 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 DYNC1LI2O43237 492 aaPredicted RBP6.51□□□□□ -1.37
SKP1-205ENST00000519054 ZNF16P17020 682 aaPredicted RBP6.51□□□□□ -1.37
SKP1-205ENST00000519054 LMNB1P20700 586 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 ITGAEP38570 1179 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 LIG3P49916 1009 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 MAP7Q14244 749 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 SLC51AQ86UW1 340 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 SHISA5Q8N114 240 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 SHKBP1Q8TBC3 707 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 PRKAG2Q9UGJ0 569 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 PCDHB5Q9Y5E4 795 aa6.51□□□□□ -1.37
SKP1-205ENST00000519054 SCO2A0A1W2PP80 73 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 WDR64B1ANS9 1081 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 TGFB1P01137 390 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 NEFMP07197 916 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 ADMP35318 185 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 ERVK-24P63145 666 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 SEPT6Q14141 434 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 PPM1JQ5JR12 505 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.5□□□□□ -1.37
SKP1-205ENST00000519054 C12orf40Q86WS4 652 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 ZDHHC13Q8IUH4 622 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 SMYD4Q8IYR2 804 aaPredicted RBP6.5□□□□□ -1.37
SKP1-205ENST00000519054 GAL3ST3Q96A11 431 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 TBC1D32Q96NH3 1257 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 NOC4LQ9BVI4 516 aaKnown RBP6.5□□□□□ -1.37
SKP1-205ENST00000519054 PICK1Q9NRD5 415 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 RNF112Q9ULX5 631 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 TLR6Q9Y2C9 796 aa6.5□□□□□ -1.37
SKP1-205ENST00000519054 F13BP05160 661 aa6.49□□□□□ -1.37
SKP1-205ENST00000519054 RPS26P62854 115 aaKnown RBP6.49□□□□□ -1.37
SKP1-205ENST00000519054 INPP5AQ14642 412 aa6.49□□□□□ -1.37
SKP1-205ENST00000519054 SCARA3Q6AZY7 606 aa6.49□□□□□ -1.37
SKP1-205ENST00000519054 AGMOQ6ZNB7 445 aa6.49□□□□□ -1.37
SKP1-205ENST00000519054 ELMO3Q96BJ8 720 aa6.49□□□□□ -1.37
SKP1-205ENST00000519054 BCL11AQ9H165 835 aa6.49□□□□□ -1.37
SKP1-205ENST00000519054 SSU72Q9NP77 194 aaKnown RBP6.49□□□□□ -1.37
SKP1-205ENST00000519054 RLBP1P12271 317 aa6.48□□□□□ -1.37
SKP1-205ENST00000519054 TFE3P19532 575 aaPredicted RBP6.48□□□□□ -1.37
SKP1-205ENST00000519054 CDK8P49336 464 aa6.48□□□□□ -1.37
SKP1-205ENST00000519054 MRPL58Q14197 206 aaKnown RBP6.48□□□□□ -1.37
SKP1-205ENST00000519054 LRFN4Q6PJG9 635 aa6.48□□□□□ -1.37
SKP1-205ENST00000519054 ZAR1Q86SH2 424 aa6.48□□□□□ -1.37
SKP1-205ENST00000519054 RNF214Q8ND24 703 aa6.48□□□□□ -1.37
SKP1-205ENST00000519054 GIMAP7Q8NHV1 300 aa6.48□□□□□ -1.37
SKP1-205ENST00000519054 ISL2Q96A47 359 aa6.48□□□□□ -1.37
SKP1-205ENST00000519054 C1GALT1Q9NS00 363 aa6.48□□□□□ -1.37
SKP1-205ENST00000519054 ATG3Q9NT62 314 aa6.48□□□□□ -1.37
SKP1-205ENST00000519054 PRAMEF27A3QJZ7 478 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 PRR19A6NJB7 356 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 FAM170BA6NMN3 283 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 SSTR4P31391 388 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 CDK5R2Q13319 367 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 SEZ6L2Q6UXD5 910 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 PHC3Q8NDX5 983 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 GATA6Q92908 595 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 PLPPR2Q96GM1 343 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 OSBPL1AQ9BXW6 950 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 MIR1-1HGQ9H1L0 117 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 PCOLCE2Q9UKZ9 415 aa6.47□□□□□ -1.37
SKP1-205ENST00000519054 WIPI1Q5MNZ9 446 aaPredicted RBP6.46□□□□□ -1.38
SKP1-205ENST00000519054 HDXQ7Z353 690 aa6.46□□□□□ -1.38
SKP1-205ENST00000519054 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.46□□□□□ -1.38
SKP1-205ENST00000519054 JARID2Q92833 1246 aaPredicted RBP6.46□□□□□ -1.38
SKP1-205ENST00000519054 RBM47A0AV96 593 aaKnown RBP6.45□□□□□ -1.38
SKP1-205ENST00000519054 NTF4P34130 210 aa6.45□□□□□ -1.38
SKP1-205ENST00000519054 RING1Q06587 406 aa6.45□□□□□ -1.38
SKP1-205ENST00000519054 ZBTB37Q5TC79 503 aa6.45□□□□□ -1.38
SKP1-205ENST00000519054 ZNF765Q7L2R6 523 aa6.45□□□□□ -1.38
SKP1-205ENST00000519054 UBE3DQ7Z6J8 389 aa6.45□□□□□ -1.38
SKP1-205ENST00000519054 RELL1Q8IUW5 271 aa6.45□□□□□ -1.38
SKP1-205ENST00000519054 Q8N3U1 123 aa6.45□□□□□ -1.38
SKP1-205ENST00000519054 PIM2Q9P1W9 311 aa6.45□□□□□ -1.38
SKP1-205ENST00000519054 MINDY4BA8MYZ0 360 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 FANCGO15287 622 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 COBLO75128 1261 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 PF4P02776 101 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 FAM87AP0C7U9 286 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 GBP2P32456 591 aaPredicted RBP6.44□□□□□ -1.38
SKP1-205ENST00000519054 LRP8Q14114 963 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 ARTNQ5T4W7 220 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 CDC37L1Q7L3B6 337 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 CYFIP1Q7L576 1253 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 TMEM74Q96NL1 305 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 METTL22Q9BUU2 404 aaPredicted RBP6.44□□□□□ -1.38
SKP1-205ENST00000519054 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 SNCAIPQ9Y6H5 919 aa6.44□□□□□ -1.38
SKP1-205ENST00000519054 HYAL3O43820 417 aaPredicted RBP6.43□□□□□ -1.38
SKP1-205ENST00000519054 MED26O95402 600 aa6.43□□□□□ -1.38
SKP1-205ENST00000519054 HOXA10P31260 410 aaPredicted RBP6.43□□□□□ -1.38
SKP1-205ENST00000519054 GRIK1P39086 918 aa6.43□□□□□ -1.38
SKP1-205ENST00000519054 FAM160A1Q05DH4 1040 aa6.43□□□□□ -1.38
SKP1-205ENST00000519054 CAMK2GQ13555 558 aaPredicted RBP6.43□□□□□ -1.38
SKP1-205ENST00000519054 TSNAXIP1Q2TAA8 658 aa6.43□□□□□ -1.38
SKP1-205ENST00000519054 DUSP27Q5VZP5 1158 aa6.43□□□□□ -1.38
SKP1-205ENST00000519054 OGFOD3Q6PK18 319 aa6.43□□□□□ -1.38
SKP1-205ENST00000519054 BNC2Q6ZN30 1099 aaPredicted RBP6.43□□□□□ -1.38
SKP1-205ENST00000519054 TMEM87AQ8NBN3 555 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms