RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 ARMC2Q8NEN0 867 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 SELENOOQ9BVL4 669 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 TEX13AQ9BXU3 409 aaPredicted RBP15.38■□□□□ 0.05
PABPC1-208ENST00000519004 MYO6Q9UM54 1294 aa15.38■□□□□ 0.05
PABPC1-208ENST00000519004 MYBL2P10244 700 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 PDHBP11177 359 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 SKOR1P84550 965 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 ICA1Q05084 483 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 PDE4BQ07343 736 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 NRKQ7Z2Y5 1582 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 NME9Q86XW9 330 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 GSPT2Q8IYD1 628 aaKnown RBP15.37■□□□□ 0.05
PABPC1-208ENST00000519004 CCDC13Q8IYE1 715 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 CLASRPQ8N2M8 674 aaKnown RBP15.37■□□□□ 0.05
PABPC1-208ENST00000519004 LRRC2Q9BYS8 371 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 GOLGA6BA6NDN3 693 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 AKR1B15C9JRZ8 316 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-208ENST00000519004 SKAP2O75563 359 aaPredicted RBP15.37■□□□□ 0.05
PABPC1-208ENST00000519004 USPL1Q5W0Q7 1092 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 SH3GL3Q99963 347 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 POLR3EQ9NVU0 708 aa15.37■□□□□ 0.05
PABPC1-208ENST00000519004 ZNF18P17022 549 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 CMA1P23946 247 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 PNOCQ13519 176 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 CEP57Q86XR8 500 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 MAGEC3Q8TD91 643 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 NECTIN2Q92692 538 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 GPATCH3Q96I76 525 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 NBPF3Q9H094 633 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 CENPHQ9H3R5 247 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 ATP6V0A4Q9HBG4 840 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 SBNO1A3KN83 1393 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 PIK3C2BO00750 1634 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 TARSL2A2RTX5 802 aaKnown RBP15.36■□□□□ 0.05
PABPC1-208ENST00000519004 PPFIA3O75145 1194 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 CDC27P30260 824 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 PDCLQ13371 301 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 SNCBQ16143 134 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 OLFM4Q6UX06 510 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 CCDC26Q8TAB7 109 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 NAA15Q9BXJ9 866 aaKnown RBP15.36■□□□□ 0.05
PABPC1-208ENST00000519004 SPATS2LQ9NUQ6 558 aaKnown RBP15.36■□□□□ 0.05
PABPC1-208ENST00000519004 CEMIPQ8WUJ3 1361 aa15.36■□□□□ 0.05
PABPC1-208ENST00000519004 GOLGA8KD6RF30 607 aa15.35■□□□□ 0.05
PABPC1-208ENST00000519004 MPHOSPH10O00566 681 aaKnown RBP15.35■□□□□ 0.05
PABPC1-208ENST00000519004 TAF5LO75529 589 aa15.35■□□□□ 0.05
PABPC1-208ENST00000519004 NAP1L1P55209 391 aaKnown RBP15.35■□□□□ 0.05
PABPC1-208ENST00000519004 OS9Q13438 667 aaPredicted RBP15.35■□□□□ 0.05
PABPC1-208ENST00000519004 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.35■□□□□ 0.05
PABPC1-208ENST00000519004 ZMYND10O75800 440 aa15.35■□□□□ 0.05
PABPC1-208ENST00000519004 MICALCLQ6ZW33 695 aa15.35■□□□□ 0.05
PABPC1-208ENST00000519004 DNAJC5BQ9UF47 199 aa15.35■□□□□ 0.05
PABPC1-208ENST00000519004 COL15A1P39059 1388 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 NBPF7P0C2Y1 421 aaPredicted RBP15.34■□□□□ 0.05
PABPC1-208ENST00000519004 BMP6P22004 513 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 GCKP35557 465 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 SF3B2Q13435 895 aaKnown RBP15.34■□□□□ 0.05
PABPC1-208ENST00000519004 EIF4A2Q14240 407 aaKnown RBP15.34■□□□□ 0.05
PABPC1-208ENST00000519004 NAA25Q14CX7 972 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 ZC3H12AQ5D1E8 599 aaKnown RBP15.34■□□□□ 0.05
PABPC1-208ENST00000519004 CDCA2Q69YH5 1023 aaPredicted RBP15.34■□□□□ 0.05
PABPC1-208ENST00000519004 NBPF5PQ86XG9 351 aaPredicted RBP15.34■□□□□ 0.05
PABPC1-208ENST00000519004 PARP9Q8IXQ6 854 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 ACRBPQ8NEB7 543 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 KIF9Q9HAQ2 790 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 TTF2Q9UNY4 1162 aaKnown RBP15.34■□□□□ 0.05
PABPC1-208ENST00000519004 CARMIL3Q8ND23 1372 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 EZRP15311 586 aaKnown RBP15.34■□□□□ 0.05
PABPC1-208ENST00000519004 SLC8A3P57103 927 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 NR1I3Q14994 352 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 NAA35Q5VZE5 725 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 CCNI2Q6ZMN8 369 aaPredicted RBP15.34■□□□□ 0.05
PABPC1-208ENST00000519004 TRAPPC11Q7Z392 1133 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 MAB21L3Q8N8X9 362 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 MICAL1Q8TDZ2 1067 aa15.34■□□□□ 0.05
PABPC1-208ENST00000519004 KDM6AO15550 1401 aaPredicted RBP15.34■□□□□ 0.05
PABPC1-208ENST00000519004 ZEB2O60315 1214 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 SYKP43405 635 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 CCT2P78371 535 aaKnown RBP15.33■□□□□ 0.04
PABPC1-208ENST00000519004 RCSD1Q6JBY9 416 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 NCOA5Q9HCD5 579 aaKnown RBP15.33■□□□□ 0.04
PABPC1-208ENST00000519004 MYO1AQ9UBC5 1043 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 HPSEQ9Y251 543 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 ERCC6L2Q5T890 1561 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 FMR1Q06787 632 aaKnown RBP eCLIP15.33■□□□□ 0.047e-17■■■■■ 61.9
PABPC1-208ENST00000519004 RBL2Q08999 1139 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 TTMPQ5BVD1 217 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 RNF187Q5TA31 235 aaPredicted RBP15.33■□□□□ 0.04
PABPC1-208ENST00000519004 CYB5D1Q6P9G0 228 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 FOXP4Q8IVH2 680 aaPredicted RBP15.33■□□□□ 0.04
PABPC1-208ENST00000519004 MMS19Q96T76 1030 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 FSD1Q9BTV5 496 aa15.33■□□□□ 0.04
PABPC1-208ENST00000519004 TPX2Q9ULW0 747 aaKnown RBP15.33■□□□□ 0.04
PABPC1-208ENST00000519004 A6NNZ2 444 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 AP1G2O75843 785 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 POLR3DP05423 398 aaPredicted RBP15.32■□□□□ 0.04
PABPC1-208ENST00000519004 CDR1P51861 262 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 RWDD2BP57060 319 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 TUBB8Q3ZCM7 444 aa15.32■□□□□ 0.04
PABPC1-208ENST00000519004 METTL16Q86W50 562 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms