RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 TGFBRAP1Q8WUH2 860 aa11.32□□□□□ -0.6
CLN8-203ENST00000518780 MAP4K1Q92918 833 aa11.32□□□□□ -0.6
CLN8-203ENST00000518780 DCP1AQ9NPI6 582 aaPredicted RBP11.32□□□□□ -0.6
CLN8-203ENST00000518780 ARPP21Q9UBL0 812 aaPredicted RBP11.32□□□□□ -0.6
CLN8-203ENST00000518780 PCDHAC2Q9Y5I4 1007 aa11.32□□□□□ -0.6
CLN8-203ENST00000518780 U3KPZ7 1027 aaPredicted RBP11.32□□□□□ -0.6
CLN8-203ENST00000518780 SCN4AP35499 1836 aa11.32□□□□□ -0.6
CLN8-203ENST00000518780 COL2A1P02458 1487 aaPredicted RBP11.32□□□□□ -0.6
CLN8-203ENST00000518780 CLRN2A0PK11 232 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 SUPT20HL1Q3ZLR7 823 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 C8orf34Q49A92 452 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 EAPPQ56P03 285 aaPredicted RBP11.31□□□□□ -0.6
CLN8-203ENST00000518780 CCDC129Q6ZRS4 1044 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 FOXP4Q8IVH2 680 aaPredicted RBP11.31□□□□□ -0.6
CLN8-203ENST00000518780 OSBPL5Q9H0X9 879 aaPredicted RBP11.31□□□□□ -0.6
CLN8-203ENST00000518780 NAPBQ9H115 298 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 DEFB129Q9H1M3 183 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 VEZTQ9HBM0 779 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 NMRK2Q9NPI5 230 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 ANO2Q9NQ90 1003 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 FLT1P17948 1338 aa11.31□□□□□ -0.6
CLN8-203ENST00000518780 ATRNL1Q5VV63 1379 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 PRKAB2O43741 272 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 FGAP02671 866 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 HLA-DOAP06340 250 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 SLC3A2P08195 630 aaKnown RBP11.3□□□□□ -0.6
CLN8-203ENST00000518780 PCP11498 1178 aaKnown RBP11.3□□□□□ -0.6
CLN8-203ENST00000518780 TDO2P48775 406 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 NFIAQ12857 509 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 RASA3Q14644 834 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 MAPKAPK5Q8IW41 473 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 SDR42E1Q8WUS8 393 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 LSG1Q9H089 658 aaKnown RBP11.3□□□□□ -0.6
CLN8-203ENST00000518780 EHD4Q9H223 541 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 ZNF287Q9HBT7 754 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 MCM9Q9NXL9 1143 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 PI4KBQ9UBF8 816 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 CLEC11AQ9Y240 323 aa11.3□□□□□ -0.6
CLN8-203ENST00000518780 TCP10L2B9ZVM9 353 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 USP17L12C9JPN9 530 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 USP17L21D6R901 530 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 TBC1D12O60347 775 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 POLR3DP05423 398 aaPredicted RBP11.29□□□□□ -0.6
CLN8-203ENST00000518780 PICALMQ13492 652 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 IMMTQ16891 758 aaKnown RBP11.29□□□□□ -0.6
CLN8-203ENST00000518780 C12orf60Q5U649 245 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 RNF20Q5VTR2 975 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 CHADLQ6NUI6 762 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 CTR9Q6PD62 1173 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 KRT26Q7Z3Y9 468 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 METTL16Q86W50 562 aaKnown RBP11.29□□□□□ -0.6
CLN8-203ENST00000518780 ZNF526Q8TF50 670 aaPredicted RBP11.29□□□□□ -0.6
CLN8-203ENST00000518780 IL25Q9H293 177 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 UPF2Q9HAU5 1272 aaKnown RBP11.29□□□□□ -0.6
CLN8-203ENST00000518780 DDX4Q9NQI0 724 aaKnown RBP11.29□□□□□ -0.6
CLN8-203ENST00000518780 HERC5Q9UII4 1024 aaKnown RBP11.29□□□□□ -0.6
CLN8-203ENST00000518780 ANAPC4Q9UJX5 808 aa11.29□□□□□ -0.6
CLN8-203ENST00000518780 ZNF213O14771 459 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 FOXP2O15409 715 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 MCCP23508 829 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 NF2P35240 595 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 CACNB3P54284 484 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 MAP3K10Q02779 954 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 VPS53Q5VIR6 699 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 ZSCAN29Q8IWY8 852 aaPredicted RBP11.28□□□□□ -0.6
CLN8-203ENST00000518780 USP26Q9BXU7 913 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 BACH2Q9BYV9 841 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 RNF41Q9H4P4 317 aaPredicted RBP11.28□□□□□ -0.6
CLN8-203ENST00000518780 EPB41L4AQ9HCS5 686 aaPredicted RBP11.28□□□□□ -0.6
CLN8-203ENST00000518780 SWAP70Q9UH65 585 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 CNTNAP1P78357 1384 aa11.28□□□□□ -0.6
CLN8-203ENST00000518780 MYH2Q9UKX2 1941 aa11.27□□□□□ -0.6
CLN8-203ENST00000518780 UNCXA6NJT0 531 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 KIF3CO14782 793 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 TOMM70O94826 608 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 ZKSCAN1P17029 563 aaPredicted RBP11.27□□□□□ -0.61
CLN8-203ENST00000518780 PTH1RQ03431 593 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 TCP10Q12799 353 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 NECTIN1Q15223 517 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 TSGA10IPQ3SY00 556 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 DCAF15Q66K64 600 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 ZNF784Q8NCA9 323 aaPredicted RBP11.27□□□□□ -0.61
CLN8-203ENST00000518780 SMC1BQ8NDV3 1235 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 IL27Q8NEV9 243 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 RBM46Q8TBY0 533 aaKnown RBP11.27□□□□□ -0.61
CLN8-203ENST00000518780 TEPSINQ96N21 525 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 CSRNP1Q96S65 589 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 SERPINB13Q9UIV8 391 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 PALD1Q9ULE6 856 aa11.27□□□□□ -0.61
CLN8-203ENST00000518780 RBM8AQ9Y5S9 174 aaKnown RBP11.27□□□□□ -0.61
CLN8-203ENST00000518780 ASTN2O75129 1339 aaPredicted RBP11.27□□□□□ -0.61
CLN8-203ENST00000518780 DDTLA6NHG4 134 aaPredicted RBP11.26□□□□□ -0.61
CLN8-203ENST00000518780 FGRP09769 529 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 HSPA4P34932 840 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 FKBP1BP68106 108 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 PDE4BQ07343 736 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 PPARAQ07869 468 aa11.26□□□□□ -0.61
CLN8-203ENST00000518780 FSTL1Q12841 308 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms