RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CCNB3Q8WWL7 1395 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 MAP3K5Q99683 1374 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 TMEM238LA0A1B0GVL6 79 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 ATXN7O15265 892 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 PPM1GO15355 546 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 RARAP10276 462 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 HOXD8P13378 290 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 RHOQP17081 205 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 GBP2P32456 591 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 EIF4A3P38919 411 aaKnown RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 FCGRTP55899 365 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 PLAURQ03405 335 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 NCAPG2Q86XI2 1143 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 C16orf71Q8IYS4 520 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 C3orf58Q8NDZ4 430 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 MKL1Q969V6 931 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 MRFAP1L1Q96HT8 127 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 ABHD8Q96I13 439 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 GMCL1Q96IK5 515 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 RUBCNLQ9H714 662 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 LIN7BQ9HAP6 207 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 STK32BQ9NY57 414 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 SALL4Q9UJQ4 1053 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 SAMM50Q9Y512 469 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 SUPT16HQ9Y5B9 1047 aaKnown RBP6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 MYO5BQ9ULV0 1848 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 NPHP3Q7Z494 1330 aa6.7□□□□□ -1.34
HMGB1P23-201ENST00000518743 PIK3R4Q99570 1358 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 RIMS2Q9UQ26 1411 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 CCDC18Q5T9S5 1454 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 ANKRD62A6NC57 917 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 U2SURPO15042 1029 aaKnown RBP6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 KIF4AO95239 1232 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 MAP3K6O95382 1288 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 YBX3P16989 372 aaKnown RBP eCLIP6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 RPS26P11Q5JNZ5 115 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 CRIPAKQ8N1N5 446 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 NT5C1AQ9BXI3 368 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 TMX1Q9H3N1 280 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 GPAMQ9HCL2 828 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 AKAP2Q9Y2D5 859 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 NEXMIFQ5QGS0 1516 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 ZNF644Q9H582 1327 aaPredicted RBP6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 ROBO2Q9HCK4 1378 aa6.69□□□□□ -1.34
HMGB1P23-201ENST00000518743 SASH3O75995 380 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 LMNB1P20700 586 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 RPS26P62854 115 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 CCNJLQ8IV13 435 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 GLIS3Q8NEA6 775 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 GAS2L1Q99501 681 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 GSX2Q9BZM3 304 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 ZCCHC2Q9C0B9 1178 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 RBSNQ9H1K0 784 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 KCNQ5Q9NR82 932 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 TLR7Q9NYK1 1049 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 SIRPGQ9P1W8 387 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 GMPR2Q9P2T1 348 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 R3HCC1Q9Y3T6 440 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 ADCY9O60503 1353 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 MTUS2Q5JR59 1369 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 DHX57Q6P158 1386 aaKnown RBP6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 CROCC2H7BZ55 1655 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 CUL9Q8IWT3 2517 aa6.68□□□□□ -1.34
HMGB1P23-201ENST00000518743 EFSO43281 561 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 EIF4EBP3O60516 100 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 MMP20O60882 483 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 GRNP28799 593 aaKnown RBP6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 SMCPP49901 116 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 PEAR1Q5VY43 1037 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 CCDC84Q86UT8 332 aaPredicted RBP6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 NLGN2Q8NFZ4 835 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 CPLX3Q8WVH0 158 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 ABCB6Q9NP58 842 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 COPRSQ9NQ92 184 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 PHF24Q9UPV7 400 aa6.67□□□□□ -1.34
HMGB1P23-201ENST00000518743 ADGRL2O95490 1459 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 THSD7AQ9UPZ6 1657 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 DLL1O00548 723 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 KHNYNO15037 678 aaKnown RBP6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 ITPKAP23677 461 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 POLD1P28340 1107 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 SOX9P48436 509 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 LMNB2Q03252 620 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 TNNI3KQ59H18 835 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 SDE2Q6IQ49 451 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 LRP10Q7Z4F1 713 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 ZNF296Q8WUU4 475 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 TRERF1Q96PN7 1200 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 OSMRQ99650 979 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 TRIM55Q9BYV6 548 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 BTG4Q9NY30 223 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 MARK1Q9P0L2 795 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 KANSL3Q9P2N6 904 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 ADAMTS13Q76LX8 1427 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 PTPRUQ92729 1446 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 CCDC141Q6ZP82 1450 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 PXDNQ92626 1479 aa6.66□□□□□ -1.34
HMGB1P23-201ENST00000518743 FIGNL2A6NMB9 653 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms