RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 PTPRAP18433 802 aa15.46■□□□□ 0.07
TRAPPC9-204ENST00000518723 ZEB1P37275 1124 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC9-204ENST00000518723 MAP3K10Q02779 954 aa15.46■□□□□ 0.07
TRAPPC9-204ENST00000518723 ZFPM1Q8IX07 1006 aa15.46■□□□□ 0.07
TRAPPC9-204ENST00000518723 IDI2Q9BXS1 227 aa15.46■□□□□ 0.07
TRAPPC9-204ENST00000518723 PICK1Q9NRD5 415 aa15.46■□□□□ 0.07
TRAPPC9-204ENST00000518723 USP40Q9NVE5 1235 aa15.46■□□□□ 0.07
TRAPPC9-204ENST00000518723 AFG3L2Q9Y4W6 797 aa15.46■□□□□ 0.07
TRAPPC9-204ENST00000518723 TNPO2O14787 897 aaKnown RBP15.45■□□□□ 0.06
TRAPPC9-204ENST00000518723 ZBTB22O15209 634 aa15.45■□□□□ 0.06
TRAPPC9-204ENST00000518723 ENTPD3O75355 529 aa15.45■□□□□ 0.06
TRAPPC9-204ENST00000518723 LDHBP07195 334 aaKnown RBP15.45■□□□□ 0.06
TRAPPC9-204ENST00000518723 RFX5P48382 616 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC9-204ENST00000518723 GPR153Q6NV75 609 aa15.45■□□□□ 0.06
TRAPPC9-204ENST00000518723 DEFB118Q96PH6 123 aa15.45■□□□□ 0.06
TRAPPC9-204ENST00000518723 STAP2Q9UGK3 403 aa15.45■□□□□ 0.06
TRAPPC9-204ENST00000518723 RFX7Q2KHR2 1363 aa15.45■□□□□ 0.06
TRAPPC9-204ENST00000518723 MGAMO43451 1857 aa15.44■□□□□ 0.06
TRAPPC9-204ENST00000518723 BMP8BP34820 402 aa15.44■□□□□ 0.06
TRAPPC9-204ENST00000518723 GADL1Q6ZQY3 521 aa15.44■□□□□ 0.06
TRAPPC9-204ENST00000518723 SMCR8Q8TEV9 937 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC9-204ENST00000518723 LRCH3Q96II8 777 aa15.44■□□□□ 0.06
TRAPPC9-204ENST00000518723 USP44Q9H0E7 712 aa15.44■□□□□ 0.06
TRAPPC9-204ENST00000518723 MRS2Q9HD23 443 aa15.44■□□□□ 0.06
TRAPPC9-204ENST00000518723 PTPRCP08575 1304 aa15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 SEMA3EO15041 775 aa15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 RGS3P49796 1198 aa15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 SH3BP5LQ7L8J4 393 aa15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 ATG9AQ7Z3C6 839 aa15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 NECAB2Q7Z6G3 386 aa15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 COA7Q96BR5 231 aa15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 PAWRQ96IZ0 340 aaKnown RBP15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 GDF15Q99988 308 aa15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 GNL3LQ9NVN8 582 aaKnown RBP15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 AGTPBP1Q9UPW5 1226 aa15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 GAKO14976 1311 aa15.43■□□□□ 0.06
TRAPPC9-204ENST00000518723 CTNND1O60716 968 aaKnown RBP15.42■□□□□ 0.06
TRAPPC9-204ENST00000518723 MNX1P50219 401 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC9-204ENST00000518723 MRPL50Q8N5N7 158 aaKnown RBP15.42■□□□□ 0.06
TRAPPC9-204ENST00000518723 ANKLE1Q8NAG6 615 aa15.42■□□□□ 0.06
TRAPPC9-204ENST00000518723 FBXO3Q9UK99 471 aa15.42■□□□□ 0.06
TRAPPC9-204ENST00000518723 LRRFIP2Q9Y608 721 aaKnown RBP15.42■□□□□ 0.06
TRAPPC9-204ENST00000518723 FAM110CQ1W6H9 321 aa15.41■□□□□ 0.06
TRAPPC9-204ENST00000518723 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.41■□□□□ 0.06
TRAPPC9-204ENST00000518723 DENND2AQ9ULE3 1009 aa15.41■□□□□ 0.06
TRAPPC9-204ENST00000518723 AK9Q5TCS8 1911 aa15.41■□□□□ 0.06
TRAPPC9-204ENST00000518723 TRIM75PA6NK02 468 aa15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 CIAO1O76071 339 aa15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 ATP2B3Q16720 1220 aa15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 ZSCAN29Q8IWY8 852 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 ZGPATQ8N5A5 531 aaKnown RBP15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 ANKRD13CQ8N6S4 541 aa15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 DIS3LQ8TF46 1054 aaKnown RBP15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 FAM163AQ96GL9 167 aaPredicted RBP15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 PNMA3Q9UL41 463 aa15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 MYH13Q9UKX3 1938 aa15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 DOCK2Q92608 1830 aa15.4■□□□□ 0.06
TRAPPC9-204ENST00000518723 DDTLA6NHG4 134 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC9-204ENST00000518723 HMGCRP04035 888 aa15.39■□□□□ 0.05
TRAPPC9-204ENST00000518723 PHKA1P46020 1223 aa15.39■□□□□ 0.05
TRAPPC9-204ENST00000518723 PROCA1Q8NCQ7 364 aaPredicted RBP15.39■□□□□ 0.05
TRAPPC9-204ENST00000518723 DDX4Q9NQI0 724 aaKnown RBP15.39■□□□□ 0.05
TRAPPC9-204ENST00000518723 CEP126Q9P2H0 1117 aa15.39■□□□□ 0.05
TRAPPC9-204ENST00000518723 TAOK2Q9UL54 1235 aa15.39■□□□□ 0.05
TRAPPC9-204ENST00000518723 PDS5AQ29RF7 1337 aaKnown RBP15.39■□□□□ 0.05
TRAPPC9-204ENST00000518723 TBC1D12O60347 775 aa15.38■□□□□ 0.05
TRAPPC9-204ENST00000518723 GCLCP48506 637 aaPredicted RBP15.38■□□□□ 0.05
TRAPPC9-204ENST00000518723 LRIT3Q3SXY7 679 aa15.38■□□□□ 0.05
TRAPPC9-204ENST00000518723 TREML2Q5T2D2 321 aa15.38■□□□□ 0.05
TRAPPC9-204ENST00000518723 SLF2Q8IX21 1173 aa15.38■□□□□ 0.05
TRAPPC9-204ENST00000518723 C7orf61Q8IZ16 206 aa15.38■□□□□ 0.05
TRAPPC9-204ENST00000518723 PTPRFP10586 1907 aa15.38■□□□□ 0.05
TRAPPC9-204ENST00000518723 RPTORQ8N122 1335 aa15.38■□□□□ 0.05
TRAPPC9-204ENST00000518723 ALPK3Q96L96 1907 aa15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 NPM3O75607 178 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 SLURP2P0DP57 97 aa15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 DZIP1Q86YF9 867 aaKnown RBP15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 DEFB123Q8N688 67 aa15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 TBC1D2Q9BYX2 928 aa15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 NBPF3Q9H094 633 aa15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 GJD2Q9UKL4 321 aa15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 STXBP5LQ9Y2K9 1186 aa15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 PHIPQ8WWQ0 1821 aa15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 DOCK1Q14185 1865 aa15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 ZNF521Q96K83 1311 aa15.37■□□□□ 0.05
TRAPPC9-204ENST00000518723 UNC80Q8N2C7 3258 aa15.36■□□□□ 0.05
TRAPPC9-204ENST00000518723 IL15P40933 162 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-204ENST00000518723 PABPC4Q13310 644 aaKnown RBP eCLIP15.36■□□□□ 0.05
TRAPPC9-204ENST00000518723 CCDC102BQ68D86 513 aa15.36■□□□□ 0.05
TRAPPC9-204ENST00000518723 CCDC84Q86UT8 332 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-204ENST00000518723 OSBPL5Q9H0X9 879 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-204ENST00000518723 SIL1Q9H173 461 aa15.36■□□□□ 0.05
TRAPPC9-204ENST00000518723 HMX1Q9NP08 348 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-204ENST00000518723 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-204ENST00000518723 ZMYND8Q9ULU4 1186 aaPredicted RBP15.36■□□□□ 0.05
TRAPPC9-204ENST00000518723 BTDP43251 543 aa15.35■□□□□ 0.05
TRAPPC9-204ENST00000518723 RHBDL3P58872 404 aa15.35■□□□□ 0.05
TRAPPC9-204ENST00000518723 PICALMQ13492 652 aa15.35■□□□□ 0.05
TRAPPC9-204ENST00000518723 RASGRF1Q13972 1273 aa15.35■□□□□ 0.05
TRAPPC9-204ENST00000518723 SPTY2D1Q68D10 685 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms