RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 SSBP4Q9BWG4 385 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-207ENST00000518569 GSX1Q9H4S2 264 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-207ENST00000518569 CRIM1Q9NZV1 1036 aa6.07□□□□□ -1.44
VPS13B-207ENST00000518569 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.07□□□□□ -1.44
VPS13B-207ENST00000518569 SUPT16HQ9Y5B9 1047 aaKnown RBP6.07□□□□□ -1.44
VPS13B-207ENST00000518569 SNCAIPQ9Y6H5 919 aa6.07□□□□□ -1.44
VPS13B-207ENST00000518569 FAM221AA4D161 298 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 TMPRSS2O15393 492 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 SART1O43290 800 aaKnown RBP6.06□□□□□ -1.44
VPS13B-207ENST00000518569 GREM1O60565 184 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 CILPO75339 1184 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 ERVK-24P63145 666 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 RACK1P63244 317 aaKnown RBP6.06□□□□□ -1.44
VPS13B-207ENST00000518569 PTPN11Q06124 597 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-207ENST00000518569 SNAP47Q5SQN1 464 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 C9orf131Q5VYM1 1079 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 FBXL19Q6PCT2 694 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 GOLM1Q8NBJ4 401 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 ZNF296Q8WUU4 475 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-207ENST00000518569 MEGF10Q96KG7 1140 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 UBL7Q96S82 380 aaPredicted RBP6.06□□□□□ -1.44
VPS13B-207ENST00000518569 ATXN3LQ9H3M9 355 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 ADAMTS1Q9UHI8 967 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 PCDHA4Q9UN74 947 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 HIF3AQ9Y2N7 669 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 TACC3Q9Y6A5 838 aa6.06□□□□□ -1.44
VPS13B-207ENST00000518569 F6X3S4 739 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 ERCC5P28715 1186 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-207ENST00000518569 RPL6Q02878 288 aaKnown RBP6.05□□□□□ -1.44
VPS13B-207ENST00000518569 RING1Q06587 406 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 SEPT6Q14141 434 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 MPP2Q14168 576 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 AKAP4Q5JQC9 854 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 PRSS36Q5K4E3 855 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 FAM196AQ6ZSG2 479 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-207ENST00000518569 HDXQ7Z353 690 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 KIAA0825Q8IV33 1275 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 C2CD4AQ8NCU7 369 aaPredicted RBP6.05□□□□□ -1.44
VPS13B-207ENST00000518569 SPON2Q9BUD6 331 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 NT5C1AQ9BXI3 368 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 LRRC3Q9BY71 257 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 PPP1R9AQ9ULJ8 1098 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 PCDHGB7Q9Y5F8 929 aa6.05□□□□□ -1.44
VPS13B-207ENST00000518569 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-207ENST00000518569 GFRA2O00451 464 aa6.04□□□□□ -1.44
VPS13B-207ENST00000518569 PREPP48147 710 aa6.04□□□□□ -1.44
VPS13B-207ENST00000518569 FAM160A1Q05DH4 1040 aa6.04□□□□□ -1.44
VPS13B-207ENST00000518569 BNC2Q6ZN30 1099 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-207ENST00000518569 CYFIP1Q7L576 1253 aa6.04□□□□□ -1.44
VPS13B-207ENST00000518569 NBPF11Q86T75 865 aa6.04□□□□□ -1.44
VPS13B-207ENST00000518569 JARID2Q92833 1246 aaPredicted RBP6.04□□□□□ -1.44
VPS13B-207ENST00000518569 TP53INP1Q96A56 240 aa6.04□□□□□ -1.44
VPS13B-207ENST00000518569 FANCD2OSQ96PS1 177 aa6.04□□□□□ -1.44
VPS13B-207ENST00000518569 FANCGO15287 622 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 GAS2O43903 313 aaKnown RBP6.03□□□□□ -1.44
VPS13B-207ENST00000518569 BPNT1O95861 308 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 F13A1P00488 732 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 DRD2P14416 443 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 INPP5AQ14642 412 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 LRFN4Q6PJG9 635 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 DYMQ7RTS9 669 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 ARMC10Q8N2F6 343 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 RNF214Q8ND24 703 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 ELMO3Q96BJ8 720 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 PLPPR2Q96GM1 343 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 EAF1Q96JC9 268 aaPredicted RBP6.03□□□□□ -1.44
VPS13B-207ENST00000518569 SPATA32Q96LK8 384 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 MYRFLQ96LU7 910 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 CCSER2Q9H7U1 834 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 ZFP64Q9NPA5 681 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 DISC1Q9NRI5 854 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 AP4E1Q9UPM8 1137 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 ACTL7BQ9Y614 415 aa6.03□□□□□ -1.44
VPS13B-207ENST00000518569 ASPAP45381 313 aa6.02□□□□□ -1.45
VPS13B-207ENST00000518569 GJA8P48165 433 aa6.02□□□□□ -1.45
VPS13B-207ENST00000518569 CWF19L2Q2TBE0 894 aaKnown RBP6.02□□□□□ -1.45
VPS13B-207ENST00000518569 WIPI1Q5MNZ9 446 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-207ENST00000518569 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-207ENST00000518569 RASGRP4Q8TDF6 673 aa6.02□□□□□ -1.45
VPS13B-207ENST00000518569 EZH1Q92800 747 aaPredicted RBP6.02□□□□□ -1.45
VPS13B-207ENST00000518569 UTP4Q969X6 686 aaKnown RBP6.02□□□□□ -1.45
VPS13B-207ENST00000518569 PSMG3-AS1Q96PY0 264 aa6.02□□□□□ -1.45
VPS13B-207ENST00000518569 YIPF2Q9BWQ6 316 aa6.02□□□□□ -1.45
VPS13B-207ENST00000518569 DCDC2CA8MYV0 355 aa6.01□□□□□ -1.45
VPS13B-207ENST00000518569 DHX15O43143 795 aaKnown RBP6.01□□□□□ -1.45
VPS13B-207ENST00000518569 USP11P51784 963 aa6.01□□□□□ -1.45
VPS13B-207ENST00000518569 COL9A2Q14055 689 aaPredicted RBP6.01□□□□□ -1.45
VPS13B-207ENST00000518569 REC114Q7Z4M0 266 aa6.01□□□□□ -1.45
VPS13B-207ENST00000518569 C12orf40Q86WS4 652 aa6.01□□□□□ -1.45
VPS13B-207ENST00000518569 SLITRK4Q8IW52 837 aa6.01□□□□□ -1.45
VPS13B-207ENST00000518569 FAM20CQ8IXL6 584 aa6.01□□□□□ -1.45
VPS13B-207ENST00000518569 ACSS3Q9H6R3 686 aa6.01□□□□□ -1.45
VPS13B-207ENST00000518569 PIDD1Q9HB75 910 aa6.01□□□□□ -1.45
VPS13B-207ENST00000518569 FAM105AQ9NUU6 356 aa6.01□□□□□ -1.45
VPS13B-207ENST00000518569 PRR36Q9H6K5 1346 aa6□□□□□ -1.45
VPS13B-207ENST00000518569 H2AFB1P0C5Y9 115 aa6□□□□□ -1.45
VPS13B-207ENST00000518569 H2AFB2P0C5Z0 115 aa6□□□□□ -1.45
VPS13B-207ENST00000518569 BMP3P12645 472 aa6□□□□□ -1.45
VPS13B-207ENST00000518569 PDE4BQ07343 736 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms